RNA–Protein interactions for RNA: ENST00000417588.5

CHEK2-211, Transcript of checkpoint kinase 2, humanhuman

TSL 2

Gene CHEK2, Length 1,551 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK2-211ENST00000417588 MRC1P22897 1456 aa12.92□□□□□ -0.34
CHEK2-211ENST00000417588 RNMTO43148 476 aaKnown RBP12.91□□□□□ -0.34
CHEK2-211ENST00000417588 CABP4P57796 275 aa12.91□□□□□ -0.34
CHEK2-211ENST00000417588 NFATC2IPQ8NCF5 419 aa12.91□□□□□ -0.34
CHEK2-211ENST00000417588 LOC102724428A0A0B4J2F2 783 aa12.9□□□□□ -0.34
CHEK2-211ENST00000417588 SIK1P57059 783 aa12.9□□□□□ -0.34
CHEK2-211ENST00000417588 GAS2L2Q8NHY3 880 aa12.9□□□□□ -0.34
CHEK2-211ENST00000417588 ZNF831Q5JPB2 1677 aa12.9□□□□□ -0.34
CHEK2-211ENST00000417588 MAP3K5Q99683 1374 aa12.9□□□□□ -0.34
CHEK2-211ENST00000417588 SLC52A2Q9HAB3 445 aa12.9□□□□□ -0.35
CHEK2-211ENST00000417588 C4BP0C0L5 1744 aa12.89□□□□□ -0.35
CHEK2-211ENST00000417588 SLC4A9Q96Q91 983 aa12.89□□□□□ -0.35
CHEK2-211ENST00000417588 PNPLA7Q6ZV29 1317 aa12.88□□□□□ -0.35
CHEK2-211ENST00000417588 SIPA1L3O60292 1781 aaPredicted RBP12.88□□□□□ -0.35
CHEK2-211ENST00000417588 GNAT3A8MTJ3 354 aa12.88□□□□□ -0.35
CHEK2-211ENST00000417588 ITPK1Q13572 414 aa12.88□□□□□ -0.35
CHEK2-211ENST00000417588 IL17REQ8NFR9 667 aa12.88□□□□□ -0.35
CHEK2-211ENST00000417588 CEMIPQ8WUJ3 1361 aa12.87□□□□□ -0.35
CHEK2-211ENST00000417588 HMGB2P26583 209 aaKnown RBP12.87□□□□□ -0.35
CHEK2-211ENST00000417588 PLEKHF1Q96S99 279 aa12.87□□□□□ -0.35
CHEK2-211ENST00000417588 TFCP2L1Q9NZI6 479 aa12.87□□□□□ -0.35
CHEK2-211ENST00000417588 UBR3Q6ZT12 1888 aa12.87□□□□□ -0.35
CHEK2-211ENST00000417588 CICQ96RK0 1608 aaPredicted RBP12.87□□□□□ -0.35
CHEK2-211ENST00000417588 COL5A3P25940 1745 aaPredicted RBP12.86□□□□□ -0.35
CHEK2-211ENST00000417588 ATP6V1AP38606 617 aa12.86□□□□□ -0.35
CHEK2-211ENST00000417588 LINC00116Q8NCU8 138 aa12.86□□□□□ -0.35
CHEK2-211ENST00000417588 SPON1Q9HCB6 807 aa12.86□□□□□ -0.35
CHEK2-211ENST00000417588 DLG5Q8TDM6 1919 aa12.86□□□□□ -0.35
CHEK2-211ENST00000417588 ZBTB7AO95365 584 aa12.86□□□□□ -0.35
CHEK2-211ENST00000417588 COL24A1Q17RW2 1714 aa12.85□□□□□ -0.35
CHEK2-211ENST00000417588 UBR2Q8IWV8 1755 aa12.85□□□□□ -0.35
CHEK2-211ENST00000417588 MYH14Q7Z406 1995 aaKnown RBP12.85□□□□□ -0.35
CHEK2-211ENST00000417588 PTGER2P43116 358 aa12.85□□□□□ -0.35
CHEK2-211ENST00000417588 AMIGO3Q86WK7 504 aa12.85□□□□□ -0.35
CHEK2-211ENST00000417588 RBM42Q9BTD8 480 aaKnown RBP12.85□□□□□ -0.35
CHEK2-211ENST00000417588 MTFR1LQ9H019 292 aa12.85□□□□□ -0.35
CHEK2-211ENST00000417588 TJP1Q07157 1748 aa12.84□□□□□ -0.35
CHEK2-211ENST00000417588 KCPQ6ZWJ8 1503 aa12.84□□□□□ -0.35
CHEK2-211ENST00000417588 PTCD1O75127 700 aaKnown RBP12.84□□□□□ -0.35
CHEK2-211ENST00000417588 SLC39A6Q13433 755 aa12.84□□□□□ -0.35
CHEK2-211ENST00000417588 COL23A1Q86Y22 540 aaPredicted RBP12.84□□□□□ -0.35
CHEK2-211ENST00000417588 SLC16A10Q8TF71 515 aa12.84□□□□□ -0.35
CHEK2-211ENST00000417588 SGIP1Q9BQI5 828 aa12.84□□□□□ -0.35
CHEK2-211ENST00000417588 HTATSF1O43719 755 aaKnown RBP12.82□□□□□ -0.36
CHEK2-211ENST00000417588 TEFQ10587 303 aa12.82□□□□□ -0.36
CHEK2-211ENST00000417588 AK7Q96M32 723 aa12.82□□□□□ -0.36
CHEK2-211ENST00000417588 PNNQ9H307 717 aaKnown RBP12.82□□□□□ -0.36
CHEK2-211ENST00000417588 ATF5Q9Y2D1 282 aaPredicted RBP12.82□□□□□ -0.36
CHEK2-211ENST00000417588 RC3H1Q5TC82 1133 aaKnown RBP12.81□□□□□ -0.36
CHEK2-211ENST00000417588 MCM10Q7L590 875 aa12.81□□□□□ -0.36
CHEK2-211ENST00000417588 NEFMP07197 916 aa12.81□□□□□ -0.36
CHEK2-211ENST00000417588 SSFA2P28290 1259 aa12.81□□□□□ -0.36
CHEK2-211ENST00000417588 DCTN1Q14203 1278 aa12.81□□□□□ -0.36
CHEK2-211ENST00000417588 NFE2L2Q16236 605 aa12.81□□□□□ -0.36
CHEK2-211ENST00000417588 ZNF790Q6PG37 636 aa12.81□□□□□ -0.36
CHEK2-211ENST00000417588 SMIM5Q71RC9 77 aa12.81□□□□□ -0.36
CHEK2-211ENST00000417588 FLAD1Q8NFF5 587 aa12.81□□□□□ -0.36
CHEK2-211ENST00000417588 RTF1Q92541 710 aaKnown RBP12.81□□□□□ -0.36
CHEK2-211ENST00000417588 CNTNAP4Q9C0A0 1308 aa12.81□□□□□ -0.36
CHEK2-211ENST00000417588 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.8□□□□□ -0.36
CHEK2-211ENST00000417588 GNPATO15228 680 aa12.8□□□□□ -0.36
CHEK2-211ENST00000417588 ADAMTS8Q9UP79 889 aa12.8□□□□□ -0.36
CHEK2-211ENST00000417588 MAPK8IP3Q9UPT6 1336 aa12.8□□□□□ -0.36
CHEK2-211ENST00000417588 VSIG10Q8N0Z9 540 aa12.79□□□□□ -0.36
CHEK2-211ENST00000417588 RPS6KA4O75676 772 aa12.78□□□□□ -0.36
CHEK2-211ENST00000417588 CRKLP46109 303 aaKnown RBP12.78□□□□□ -0.36
CHEK2-211ENST00000417588 WDR43Q15061 677 aaKnown RBP eCLIP12.78□□□□□ -0.36
CHEK2-211ENST00000417588 CCDC184Q52MB2 194 aa12.78□□□□□ -0.36
CHEK2-211ENST00000417588 DNAJC10Q8IXB1 793 aa12.78□□□□□ -0.36
CHEK2-211ENST00000417588 ZNF496Q96IT1 587 aaPredicted RBP12.78□□□□□ -0.36
CHEK2-211ENST00000417588 BTBD11A6QL63 1104 aa12.77□□□□□ -0.36
CHEK2-211ENST00000417588 KCNQ3O43525 872 aa12.77□□□□□ -0.36
CHEK2-211ENST00000417588 PHF14O94880 888 aa12.77□□□□□ -0.36
CHEK2-211ENST00000417588 TTC5Q8N0Z6 440 aa12.77□□□□□ -0.36
CHEK2-211ENST00000417588 RTCBQ9Y3I0 505 aaKnown RBP12.77□□□□□ -0.36
CHEK2-211ENST00000417588 C4AP0C0L4 1744 aa12.77□□□□□ -0.37
CHEK2-211ENST00000417588 HEG1Q9ULI3 1381 aa12.77□□□□□ -0.37
CHEK2-211ENST00000417588 MSH5O43196 834 aa12.77□□□□□ -0.37
CHEK2-211ENST00000417588 CYP19A1P11511 503 aaPredicted RBP12.77□□□□□ -0.37
CHEK2-211ENST00000417588 TMPOP42166 694 aaKnown RBP12.77□□□□□ -0.37
CHEK2-211ENST00000417588 INTS5Q6P9B9 1019 aaKnown RBP12.77□□□□□ -0.37
CHEK2-211ENST00000417588 CCDC146Q8IYE0 955 aa12.77□□□□□ -0.37
CHEK2-211ENST00000417588 PPP1R1BQ9UD71 204 aaPredicted RBP12.77□□□□□ -0.37
CHEK2-211ENST00000417588 ANP32CO43423 234 aa12.76□□□□□ -0.37
CHEK2-211ENST00000417588 ADRA2BP18089 450 aa12.76□□□□□ -0.37
CHEK2-211ENST00000417588 TAF7Q15545 349 aaPredicted RBP12.76□□□□□ -0.37
CHEK2-211ENST00000417588 RUNDC1Q96C34 613 aa12.76□□□□□ -0.37
CHEK2-211ENST00000417588 KDM3BQ7LBC6 1761 aa12.75□□□□□ -0.37
CHEK2-211ENST00000417588 RIPK4P57078 832 aa12.75□□□□□ -0.37
CHEK2-211ENST00000417588 TRAPPC3LQ5T215 181 aa12.75□□□□□ -0.37
CHEK2-211ENST00000417588 ARHGEF1Q92888 912 aaKnown RBP12.75□□□□□ -0.37
CHEK2-211ENST00000417588 FMNL2Q96PY5 1086 aa12.75□□□□□ -0.37
CHEK2-211ENST00000417588 ARXQ96QS3 562 aa12.75□□□□□ -0.37
CHEK2-211ENST00000417588 THUMPD2Q9BTF0 503 aaKnown RBP12.75□□□□□ -0.37
CHEK2-211ENST00000417588 CCDC87Q9NVE4 849 aa12.75□□□□□ -0.37
CHEK2-211ENST00000417588 POLD1P28340 1107 aa12.74□□□□□ -0.37
CHEK2-211ENST00000417588 MSL1Q68DK7 614 aa12.74□□□□□ -0.37
CHEK2-211ENST00000417588 FHDC1Q9C0D6 1143 aaPredicted RBP12.73□□□□□ -0.37
CHEK2-211ENST00000417588 ZBTB1Q9Y2K1 713 aa12.73□□□□□ -0.37
CHEK2-211ENST00000417588 RRP7AQ9Y3A4 280 aaKnown RBP12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms