RNA–Protein interactions for RNA: ENST00000417508.1

VPS16-204, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-204ENST00000417508 CABP4P57796 275 aa24.98■■□□□ 1.59
VPS16-204ENST00000417508 GPR162Q16538 588 aa24.97■■□□□ 1.59
VPS16-204ENST00000417508 LINC00116Q8NCU8 138 aa24.97■■□□□ 1.59
VPS16-204ENST00000417508 UBR3Q6ZT12 1888 aa24.96■■□□□ 1.59
VPS16-204ENST00000417508 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.96■■□□□ 1.59
VPS16-204ENST00000417508 CC2D1BQ5T0F9 858 aaKnown RBP24.96■■□□□ 1.59
VPS16-204ENST00000417508 CHD4Q14839 1912 aa24.96■■□□□ 1.59
VPS16-204ENST00000417508 ITPK1Q13572 414 aa24.95■■□□□ 1.58
VPS16-204ENST00000417508 MSL1Q68DK7 614 aa24.95■■□□□ 1.58
VPS16-204ENST00000417508 ZNF831Q5JPB2 1677 aa24.94■■□□□ 1.58
VPS16-204ENST00000417508 KDM6AO15550 1401 aaPredicted RBP24.94■■□□□ 1.58
VPS16-204ENST00000417508 DIAPH1O60610 1272 aaKnown RBP24.93■■□□□ 1.58
VPS16-204ENST00000417508 AKAP4Q5JQC9 854 aa24.93■■□□□ 1.58
VPS16-204ENST00000417508 RC3H1Q5TC82 1133 aaKnown RBP24.93■■□□□ 1.58
VPS16-204ENST00000417508 RBM42Q9BTD8 480 aaKnown RBP24.93■■□□□ 1.58
VPS16-204ENST00000417508 CD2APQ9Y5K6 639 aa24.93■■□□□ 1.58
VPS16-204ENST00000417508 GNPATO15228 680 aa24.92■■□□□ 1.58
VPS16-204ENST00000417508 PHF14O94880 888 aa24.92■■□□□ 1.58
VPS16-204ENST00000417508 AMIGO3Q86WK7 504 aa24.92■■□□□ 1.58
VPS16-204ENST00000417508 NFATC2IPQ8NCF5 419 aa24.91■■□□□ 1.58
VPS16-204ENST00000417508 NLGN2Q8NFZ4 835 aa24.9■■□□□ 1.58
VPS16-204ENST00000417508 SLC4A9Q96Q91 983 aa24.89■■□□□ 1.58
VPS16-204ENST00000417508 RTCBQ9Y3I0 505 aaKnown RBP24.89■■□□□ 1.58
VPS16-204ENST00000417508 GRIN3BO60391 1043 aa24.88■■□□□ 1.57
VPS16-204ENST00000417508 ADRA2BP18089 450 aa24.88■■□□□ 1.57
VPS16-204ENST00000417508 TRAPPC3LQ5T215 181 aa24.88■■□□□ 1.57
VPS16-204ENST00000417508 HMOX1P09601 288 aa24.87■■□□□ 1.57
VPS16-204ENST00000417508 CNTNAP4Q9C0A0 1308 aa24.86■■□□□ 1.57
VPS16-204ENST00000417508 SMIM5Q71RC9 77 aa24.86■■□□□ 1.57
VPS16-204ENST00000417508 SCN11AQ9UI33 1791 aa24.85■■□□□ 1.57
VPS16-204ENST00000417508 RPS6KA4O75676 772 aa24.85■■□□□ 1.57
VPS16-204ENST00000417508 PELP1Q8IZL8 1130 aaKnown RBP24.85■■□□□ 1.57
VPS16-204ENST00000417508 NLGN1Q8N2Q7 840 aa24.84■■□□□ 1.57
VPS16-204ENST00000417508 SLC52A2Q9HAB3 445 aa24.84■■□□□ 1.57
VPS16-204ENST00000417508 PTCD1O75127 700 aaKnown RBP24.83■■□□□ 1.57
VPS16-204ENST00000417508 ZNF784Q8NCA9 323 aaPredicted RBP24.83■■□□□ 1.57
VPS16-204ENST00000417508 RNMTO43148 476 aaKnown RBP24.82■■□□□ 1.56
VPS16-204ENST00000417508 MTHFSDQ2M296 383 aaKnown RBP24.82■■□□□ 1.56
VPS16-204ENST00000417508 LGR6Q9HBX8 967 aa24.82■■□□□ 1.56
VPS16-204ENST00000417508 ARHGEF1Q92888 912 aaKnown RBP24.81■■□□□ 1.56
VPS16-204ENST00000417508 COL5A3P25940 1745 aaPredicted RBP24.81■■□□□ 1.56
VPS16-204ENST00000417508 RFC4P35249 363 aa24.79■■□□□ 1.56
VPS16-204ENST00000417508 CNGB1Q14028 1251 aaPredicted RBP24.79■■□□□ 1.56
VPS16-204ENST00000417508 CFAP53Q96M91 514 aa24.79■■□□□ 1.56
VPS16-204ENST00000417508 MYH14Q7Z406 1995 aaKnown RBP24.79■■□□□ 1.56
VPS16-204ENST00000417508 U2SURPO15042 1029 aaKnown RBP24.78■■□□□ 1.56
VPS16-204ENST00000417508 YBX3P16989 372 aaKnown RBP eCLIP24.78■■□□□ 1.56
VPS16-204ENST00000417508 MMP10P09238 476 aa24.77■■□□□ 1.56
VPS16-204ENST00000417508 CRKLP46109 303 aaKnown RBP24.77■■□□□ 1.56
VPS16-204ENST00000417508 COL3A1P02461 1466 aaPredicted RBP24.77■■□□□ 1.56
VPS16-204ENST00000417508 UTRNP46939 3433 aa24.76■■□□□ 1.55
VPS16-204ENST00000417508 GAS2L2Q8NHY3 880 aa24.76■■□□□ 1.55
VPS16-204ENST00000417508 MRC1P22897 1456 aa24.75■■□□□ 1.55
VPS16-204ENST00000417508 CICQ96RK0 1608 aaPredicted RBP24.75■■□□□ 1.55
VPS16-204ENST00000417508 VIRMAQ69YN4 1812 aaKnown RBP24.75■■□□□ 1.55
VPS16-204ENST00000417508 GYS1P13807 737 aa24.74■■□□□ 1.55
VPS16-204ENST00000417508 NUDCQ9Y266 331 aa24.74■■□□□ 1.55
VPS16-204ENST00000417508 ADAMTS7Q9UKP4 1686 aa24.73■■□□□ 1.55
VPS16-204ENST00000417508 VSIG10Q8N0Z9 540 aa24.73■■□□□ 1.55
VPS16-204ENST00000417508 GNAT3A8MTJ3 354 aa24.72■■□□□ 1.55
VPS16-204ENST00000417508 TGFB2P61812 414 aa24.71■■□□□ 1.55
VPS16-204ENST00000417508 SLC39A6Q13433 755 aa24.71■■□□□ 1.55
VPS16-204ENST00000417508 INTS5Q6P9B9 1019 aaKnown RBP24.71■■□□□ 1.55
VPS16-204ENST00000417508 DNAJC10Q8IXB1 793 aa24.7■■□□□ 1.54
VPS16-204ENST00000417508 CCDC87Q9NVE4 849 aa24.7■■□□□ 1.54
VPS16-204ENST00000417508 PARP3Q9Y6F1 533 aa24.7■■□□□ 1.54
VPS16-204ENST00000417508 TJP1Q07157 1748 aa24.69■■□□□ 1.54
VPS16-204ENST00000417508 PPP2R1AP30153 589 aa24.69■■□□□ 1.54
VPS16-204ENST00000417508 CYP19A1P11511 503 aaPredicted RBP24.68■■□□□ 1.54
VPS16-204ENST00000417508 TEFQ10587 303 aa24.68■■□□□ 1.54
VPS16-204ENST00000417508 USP42Q9H9J4 1324 aaKnown RBP24.67■■□□□ 1.54
VPS16-204ENST00000417508 TTC5Q8N0Z6 440 aa24.67■■□□□ 1.54
VPS16-204ENST00000417508 IL17REQ8NFR9 667 aa24.67■■□□□ 1.54
VPS16-204ENST00000417508 KIF13BQ9NQT8 1826 aa24.67■■□□□ 1.54
VPS16-204ENST00000417508 ZPR1O75312 459 aa24.65■■□□□ 1.54
VPS16-204ENST00000417508 FCHSD2O94868 740 aa24.65■■□□□ 1.54
VPS16-204ENST00000417508 C4AP0C0L4 1744 aa24.65■■□□□ 1.54
VPS16-204ENST00000417508 PRKAR2BP31323 418 aa24.65■■□□□ 1.54
VPS16-204ENST00000417508 TEX13AQ9BXU3 409 aaPredicted RBP24.65■■□□□ 1.54
VPS16-204ENST00000417508 RSPH6AQ9H0K4 717 aa24.65■■□□□ 1.54
VPS16-204ENST00000417508 KCPQ6ZWJ8 1503 aa24.64■■□□□ 1.53
VPS16-204ENST00000417508 SOS1Q07889 1333 aaPredicted RBP24.63■■□□□ 1.53
VPS16-204ENST00000417508 STARD3NLO95772 234 aa24.63■■□□□ 1.53
VPS16-204ENST00000417508 U2AF1L5P0DN76 240 aaPredicted RBP24.63■■□□□ 1.53
VPS16-204ENST00000417508 U2AF1Q01081 240 aaKnown RBP eCLIP24.63■■□□□ 1.53
VPS16-204ENST00000417508 FKBP8Q14318 412 aa24.63■■□□□ 1.53
VPS16-204ENST00000417508 PHACTR3Q96KR7 559 aa24.63■■□□□ 1.53
VPS16-204ENST00000417508 SRP68Q9UHB9 627 aaKnown RBP24.63■■□□□ 1.53
VPS16-204ENST00000417508 C10orf71Q711Q0 1435 aa24.62■■□□□ 1.53
VPS16-204ENST00000417508 ZNF790Q6PG37 636 aa24.62■■□□□ 1.53
VPS16-204ENST00000417508 GOLGB1Q14789 3259 aaKnown RBP24.61■■□□□ 1.53
VPS16-204ENST00000417508 TM4SF1P30408 202 aa24.61■■□□□ 1.53
VPS16-204ENST00000417508 NARFQ9UHQ1 456 aa24.61■■□□□ 1.53
VPS16-204ENST00000417508 CEMIPQ8WUJ3 1361 aa24.61■■□□□ 1.53
VPS16-204ENST00000417508 UBR2Q8IWV8 1755 aa24.6■■□□□ 1.53
VPS16-204ENST00000417508 PXDNLA1KZ92 1463 aa24.6■■□□□ 1.53
VPS16-204ENST00000417508 A0A0G2JLW4 131 aa24.6■■□□□ 1.53
VPS16-204ENST00000417508 USPL1Q5W0Q7 1092 aa24.59■■□□□ 1.53
VPS16-204ENST00000417508 ZNF496Q96IT1 587 aaPredicted RBP24.58■■□□□ 1.53
VPS16-204ENST00000417508 ZBTB1Q9Y2K1 713 aa24.58■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms