RNA–Protein interactions for RNA: ENST00000417352.5

COPS3-202, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 1,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-202ENST00000417352 ABCC6O95255 1503 aa9.68□□□□□ -0.86
COPS3-202ENST00000417352 NHSQ6T4R5 1651 aa9.67□□□□□ -0.86
COPS3-202ENST00000417352 BCL9O00512 1426 aa9.67□□□□□ -0.86
COPS3-202ENST00000417352 SMG6Q86US8 1419 aaKnown RBP9.67□□□□□ -0.86
COPS3-202ENST00000417352 ANKRD36BQ8N2N9 1353 aa9.67□□□□□ -0.86
COPS3-202ENST00000417352 FYB1O15117 783 aa9.67□□□□□ -0.86
COPS3-202ENST00000417352 PLCG2P16885 1265 aa9.67□□□□□ -0.86
COPS3-202ENST00000417352 NBPF6Q5VWK0 638 aa9.67□□□□□ -0.86
COPS3-202ENST00000417352 NBPF4Q96M43 638 aa9.67□□□□□ -0.86
COPS3-202ENST00000417352 ARXQ96QS3 562 aa9.67□□□□□ -0.86
COPS3-202ENST00000417352 TATP17735 454 aaPredicted RBP9.66□□□□□ -0.86
COPS3-202ENST00000417352 POLD1P28340 1107 aa9.66□□□□□ -0.86
COPS3-202ENST00000417352 PTGER2P43116 358 aa9.66□□□□□ -0.86
COPS3-202ENST00000417352 TNNT2P45379 298 aaPredicted RBP9.66□□□□□ -0.86
COPS3-202ENST00000417352 VASPP50552 380 aaPredicted RBP9.66□□□□□ -0.86
COPS3-202ENST00000417352 GPR162Q16538 588 aa9.66□□□□□ -0.86
COPS3-202ENST00000417352 ZNF827Q17R98 1081 aa9.66□□□□□ -0.86
COPS3-202ENST00000417352 HSP90AB2PQ58FF8 381 aa9.66□□□□□ -0.86
COPS3-202ENST00000417352 SYT17Q9BSW7 474 aa9.66□□□□□ -0.86
COPS3-202ENST00000417352 LRRC4BQ9NT99 713 aa9.66□□□□□ -0.86
COPS3-202ENST00000417352 CCNL1Q9UK58 526 aaPredicted RBP9.66□□□□□ -0.86
COPS3-202ENST00000417352 PCDHB8Q9UN66 801 aa9.66□□□□□ -0.86
COPS3-202ENST00000417352 MYOM1P52179 1685 aa9.66□□□□□ -0.86
COPS3-202ENST00000417352 CASZ1Q86V15 1759 aa9.65□□□□□ -0.86
COPS3-202ENST00000417352 USP54Q70EL1 1684 aa9.65□□□□□ -0.86
COPS3-202ENST00000417352 IRX5P78411 483 aaPredicted RBP9.65□□□□□ -0.86
COPS3-202ENST00000417352 SLC27A3Q5K4L6 730 aa9.65□□□□□ -0.86
COPS3-202ENST00000417352 MPRIPQ6WCQ1 1025 aa9.65□□□□□ -0.86
COPS3-202ENST00000417352 FAM208AQ9UK61 1670 aaKnown RBP9.64□□□□□ -0.87
COPS3-202ENST00000417352 DOT1LQ8TEK3 1739 aa9.63□□□□□ -0.87
COPS3-202ENST00000417352 SLAIN1Q8ND83 568 aa9.63□□□□□ -0.87
COPS3-202ENST00000417352 EMILIN1Q9Y6C2 1016 aa9.63□□□□□ -0.87
COPS3-202ENST00000417352 KIF20BQ96Q89 1820 aa9.63□□□□□ -0.87
COPS3-202ENST00000417352 GSE1Q14687 1217 aa9.62□□□□□ -0.87
COPS3-202ENST00000417352 MSL1Q68DK7 614 aa9.62□□□□□ -0.87
COPS3-202ENST00000417352 CCER1Q8TC90 406 aaPredicted RBP9.62□□□□□ -0.87
COPS3-202ENST00000417352 CARD14Q9BXL6 1004 aa9.62□□□□□ -0.87
COPS3-202ENST00000417352 RTL1A6NKG5 1358 aa9.62□□□□□ -0.87
COPS3-202ENST00000417352 MEGF6O75095 1541 aa9.61□□□□□ -0.87
COPS3-202ENST00000417352 PCDH11XQ9BZA7 1347 aa9.61□□□□□ -0.87
COPS3-202ENST00000417352 PCDH11YQ9BZA8 1340 aa9.61□□□□□ -0.87
COPS3-202ENST00000417352 OCEL1Q9H607 264 aa9.61□□□□□ -0.87
COPS3-202ENST00000417352 NSD3Q9BZ95 1437 aa9.61□□□□□ -0.87
COPS3-202ENST00000417352 FLT4P35916 1363 aa9.61□□□□□ -0.87
COPS3-202ENST00000417352 CGNL1Q0VF96 1302 aa9.6□□□□□ -0.87
COPS3-202ENST00000417352 PNPLA7Q6ZV29 1317 aa9.6□□□□□ -0.87
COPS3-202ENST00000417352 PHF14O94880 888 aa9.6□□□□□ -0.87
COPS3-202ENST00000417352 SLC16A10Q8TF71 515 aa9.6□□□□□ -0.87
COPS3-202ENST00000417352 SPG7Q9UQ90 795 aa9.6□□□□□ -0.87
COPS3-202ENST00000417352 AK7Q96M32 723 aa9.59□□□□□ -0.87
COPS3-202ENST00000417352 INSRP06213 1382 aa9.59□□□□□ -0.87
COPS3-202ENST00000417352 MAP2P11137 1827 aaKnown RBP9.59□□□□□ -0.88
COPS3-202ENST00000417352 ZNF467Q7Z7K2 595 aaPredicted RBP9.58□□□□□ -0.88
COPS3-202ENST00000417352 COL23A1Q86Y22 540 aaPredicted RBP9.58□□□□□ -0.88
COPS3-202ENST00000417352 ZNF784Q8NCA9 323 aaPredicted RBP9.58□□□□□ -0.88
COPS3-202ENST00000417352 PAPPAQ13219 1627 aa9.57□□□□□ -0.88
COPS3-202ENST00000417352 SHANK3Q9BYB0 1731 aa9.57□□□□□ -0.88
COPS3-202ENST00000417352 CYP27B1O15528 508 aa9.57□□□□□ -0.88
COPS3-202ENST00000417352 HMGB2P26583 209 aaKnown RBP9.57□□□□□ -0.88
COPS3-202ENST00000417352 EIF4G2P78344 907 aaKnown RBP eCLIP9.57□□□□□ -0.88
COPS3-202ENST00000417352 CNGB1Q14028 1251 aaPredicted RBP9.57□□□□□ -0.88
COPS3-202ENST00000417352 NLGN2Q8NFZ4 835 aa9.57□□□□□ -0.88
COPS3-202ENST00000417352 SMARCC1Q92922 1105 aaPredicted RBP9.57□□□□□ -0.88
COPS3-202ENST00000417352 TMOD3Q9NYL9 352 aa9.57□□□□□ -0.88
COPS3-202ENST00000417352 WWC3Q9ULE0 1092 aa9.57□□□□□ -0.88
COPS3-202ENST00000417352 TIMELESSQ9UNS1 1208 aa9.57□□□□□ -0.88
COPS3-202ENST00000417352 PALLDQ8WX93 1383 aa9.57□□□□□ -0.88
COPS3-202ENST00000417352 LY75O60449 1722 aa9.56□□□□□ -0.88
COPS3-202ENST00000417352 CHD4Q14839 1912 aa9.56□□□□□ -0.88
COPS3-202ENST00000417352 NSD2O96028 1365 aa9.56□□□□□ -0.88
COPS3-202ENST00000417352 HSPA5P11021 654 aaKnown RBP9.56□□□□□ -0.88
COPS3-202ENST00000417352 SMIM5Q71RC9 77 aa9.56□□□□□ -0.88
COPS3-202ENST00000417352 EYA1Q99502 592 aa9.56□□□□□ -0.88
COPS3-202ENST00000417352 PANK3Q9H999 370 aa9.56□□□□□ -0.88
COPS3-202ENST00000417352 TUBGCP6Q96RT7 1819 aa9.56□□□□□ -0.88
COPS3-202ENST00000417352 ATP6V1AP38606 617 aa9.55□□□□□ -0.88
COPS3-202ENST00000417352 MORC1Q86VD1 984 aa9.55□□□□□ -0.88
COPS3-202ENST00000417352 FLAD1Q8NFF5 587 aa9.55□□□□□ -0.88
COPS3-202ENST00000417352 PIGBQ92521 554 aa9.55□□□□□ -0.88
COPS3-202ENST00000417352 POLKQ9UBT6 870 aa9.55□□□□□ -0.88
COPS3-202ENST00000417352 WASHC2AQ641Q2 1341 aa9.55□□□□□ -0.88
COPS3-202ENST00000417352 C5P01031 1676 aa9.55□□□□□ -0.88
COPS3-202ENST00000417352 ITGB4P16144 1822 aa9.54□□□□□ -0.88
COPS3-202ENST00000417352 KIF24Q5T7B8 1368 aa9.54□□□□□ -0.88
COPS3-202ENST00000417352 ST18O60284 1047 aa9.54□□□□□ -0.88
COPS3-202ENST00000417352 CHRM1P11229 460 aaPredicted RBP9.54□□□□□ -0.88
COPS3-202ENST00000417352 IFNL2Q8IZJ0 200 aa9.54□□□□□ -0.88
COPS3-202ENST00000417352 GNPATO15228 680 aa9.53□□□□□ -0.88
COPS3-202ENST00000417352 EIF4A2Q14240 407 aaKnown RBP9.53□□□□□ -0.88
COPS3-202ENST00000417352 ASAP1Q9ULH1 1129 aa9.53□□□□□ -0.88
COPS3-202ENST00000417352 KNSTRNQ9Y448 316 aa9.53□□□□□ -0.88
COPS3-202ENST00000417352 QSER1Q2KHR3 1735 aa9.53□□□□□ -0.88
COPS3-202ENST00000417352 SENP3-EIF4A1A0A087X0R7 540 aa9.52□□□□□ -0.89
COPS3-202ENST00000417352 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.52□□□□□ -0.89
COPS3-202ENST00000417352 LOC102724428A0A0B4J2F2 783 aa9.52□□□□□ -0.89
COPS3-202ENST00000417352 GRIN3BO60391 1043 aa9.52□□□□□ -0.89
COPS3-202ENST00000417352 PHKG2P15735 406 aa9.52□□□□□ -0.89
COPS3-202ENST00000417352 SIK1P57059 783 aa9.52□□□□□ -0.89
COPS3-202ENST00000417352 CABP4P57796 275 aa9.52□□□□□ -0.89
COPS3-202ENST00000417352 GOLGA2Q08379 1002 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms