RNA–Protein interactions for RNA: ENST00000416372.5

RTN4R-202, Transcript of reticulon 4 receptor, humanhuman

APPRIS ALT2 TSL 3

Gene RTN4R, Length 1,777 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4R-202ENST00000416372 TMEM57Q8N5G2 664 aa23.01■■□□□ 1.27
RTN4R-202ENST00000416372 API5Q9BZZ5 524 aaKnown RBP23.01■■□□□ 1.27
RTN4R-202ENST00000416372 DDX19BQ9UMR2 479 aa23.01■■□□□ 1.27
RTN4R-202ENST00000416372 SCN11AQ9UI33 1791 aa23■■□□□ 1.27
RTN4R-202ENST00000416372 CYP27B1O15528 508 aa22.99■■□□□ 1.27
RTN4R-202ENST00000416372 IL2RBP14784 551 aa22.99■■□□□ 1.27
RTN4R-202ENST00000416372 CENPQQ7L2Z9 268 aaPredicted RBP22.99■■□□□ 1.27
RTN4R-202ENST00000416372 SIPA1L3O60292 1781 aaPredicted RBP22.98■■□□□ 1.27
RTN4R-202ENST00000416372 SLC4A2P04920 1241 aa22.98■■□□□ 1.27
RTN4R-202ENST00000416372 HSP90AB1P08238 724 aaKnown RBP22.98■■□□□ 1.27
RTN4R-202ENST00000416372 EIF4A1P60842 406 aaKnown RBP22.98■■□□□ 1.27
RTN4R-202ENST00000416372 CCDC30Q5VVM6 783 aa22.98■■□□□ 1.27
RTN4R-202ENST00000416372 ZCRB1Q8TBF4 217 aaKnown RBP22.98■■□□□ 1.27
RTN4R-202ENST00000416372 STK31Q9BXU1 1019 aa22.98■■□□□ 1.27
RTN4R-202ENST00000416372 KDM6AO15550 1401 aaPredicted RBP22.98■■□□□ 1.27
RTN4R-202ENST00000416372 KDM2BQ8NHM5 1336 aa22.98■■□□□ 1.27
RTN4R-202ENST00000416372 DCAF5Q96JK2 942 aa22.96■■□□□ 1.27
RTN4R-202ENST00000416372 ABCC4O15439 1325 aa22.96■■□□□ 1.27
RTN4R-202ENST00000416372 KCNQ3O43525 872 aa22.96■■□□□ 1.27
RTN4R-202ENST00000416372 SLC52A2Q9HAB3 445 aa22.95■■□□□ 1.26
RTN4R-202ENST00000416372 PTPRCP08575 1304 aa22.95■■□□□ 1.26
RTN4R-202ENST00000416372 PCDH11XQ9BZA7 1347 aa22.95■■□□□ 1.26
RTN4R-202ENST00000416372 PCDH11YQ9BZA8 1340 aa22.95■■□□□ 1.26
RTN4R-202ENST00000416372 USP35Q9P2H5 1018 aa22.94■■□□□ 1.26
RTN4R-202ENST00000416372 ADAMTS2O95450 1211 aa22.94■■□□□ 1.26
RTN4R-202ENST00000416372 NECTIN2Q92692 538 aa22.94■■□□□ 1.26
RTN4R-202ENST00000416372 HOXB7P09629 217 aa22.93■■□□□ 1.26
RTN4R-202ENST00000416372 NUTM2BA6NNL0 878 aaPredicted RBP22.92■■□□□ 1.26
RTN4R-202ENST00000416372 NUTM2EB1AL46 878 aaPredicted RBP22.92■■□□□ 1.26
RTN4R-202ENST00000416372 HDGFL1Q5TGJ6 251 aa22.92■■□□□ 1.26
RTN4R-202ENST00000416372 NUTM2AQ8IVF1 878 aaPredicted RBP22.92■■□□□ 1.26
RTN4R-202ENST00000416372 CHMP4AQ9BY43 222 aa22.92■■□□□ 1.26
RTN4R-202ENST00000416372 PCDHB15Q9Y5E8 787 aa22.92■■□□□ 1.26
RTN4R-202ENST00000416372 CHMP4BQ9H444 224 aaKnown RBP22.91■■□□□ 1.26
RTN4R-202ENST00000416372 IGHDP01880 384 aa22.91■■□□□ 1.26
RTN4R-202ENST00000416372 NFATC2IPQ8NCF5 419 aa22.91■■□□□ 1.26
RTN4R-202ENST00000416372 PLCH1Q4KWH8 1693 aa22.9■■□□□ 1.26
RTN4R-202ENST00000416372 G2E3Q7L622 706 aa22.9■■□□□ 1.26
RTN4R-202ENST00000416372 MRC1P22897 1456 aa22.9■■□□□ 1.26
RTN4R-202ENST00000416372 CACNA1FO60840 1977 aa22.9■■□□□ 1.26
RTN4R-202ENST00000416372 ZBTB40Q9NUA8 1239 aa22.89■■□□□ 1.26
RTN4R-202ENST00000416372 RGS12O14924 1447 aa22.89■■□□□ 1.25
RTN4R-202ENST00000416372 EIF2S2P20042 333 aaKnown RBP22.89■■□□□ 1.25
RTN4R-202ENST00000416372 CABP4P57796 275 aa22.89■■□□□ 1.25
RTN4R-202ENST00000416372 RBM19Q9Y4C8 960 aaKnown RBP22.89■■□□□ 1.25
RTN4R-202ENST00000416372 DDX54Q8TDD1 881 aaKnown RBP22.88■■□□□ 1.25
RTN4R-202ENST00000416372 RWDD1Q9H446 243 aaPredicted RBP22.88■■□□□ 1.25
RTN4R-202ENST00000416372 SHANK3Q9BYB0 1731 aa22.87■■□□□ 1.25
RTN4R-202ENST00000416372 INTS3Q68E01 1043 aaKnown RBP22.87■■□□□ 1.25
RTN4R-202ENST00000416372 ZNF790Q6PG37 636 aa22.87■■□□□ 1.25
RTN4R-202ENST00000416372 HEG1Q9ULI3 1381 aa22.87■■□□□ 1.25
RTN4R-202ENST00000416372 ZBTB7BO15156 539 aaPredicted RBP22.86■■□□□ 1.25
RTN4R-202ENST00000416372 GIGYF1O75420 1035 aaPredicted RBP22.86■■□□□ 1.25
RTN4R-202ENST00000416372 FLIIQ13045 1269 aa22.86■■□□□ 1.25
RTN4R-202ENST00000416372 SLC39A6Q13433 755 aa22.86■■□□□ 1.25
RTN4R-202ENST00000416372 NKX1-1Q15270 411 aaPredicted RBP22.86■■□□□ 1.25
RTN4R-202ENST00000416372 FKBP5Q13451 457 aaPredicted RBP22.84■■□□□ 1.25
RTN4R-202ENST00000416372 NRAPQ86VF7 1730 aa22.84■■□□□ 1.25
RTN4R-202ENST00000416372 TTC5Q8N0Z6 440 aa22.84■■□□□ 1.25
RTN4R-202ENST00000416372 JCADQ9P266 1359 aa22.83■■□□□ 1.25
RTN4R-202ENST00000416372 DISP2A7MBM2 1401 aa22.83■■□□□ 1.25
RTN4R-202ENST00000416372 ERVV-2B6SEH9 535 aa22.83■■□□□ 1.24
RTN4R-202ENST00000416372 CHPF2Q9P2E5 772 aa22.82■■□□□ 1.24
RTN4R-202ENST00000416372 F6X3S4 739 aa22.81■■□□□ 1.24
RTN4R-202ENST00000416372 SLC4A10Q6U841 1118 aa22.81■■□□□ 1.24
RTN4R-202ENST00000416372 NWD2Q9ULI1 1742 aa22.8■■□□□ 1.24
RTN4R-202ENST00000416372 CCT4P50991 539 aaKnown RBP22.8■■□□□ 1.24
RTN4R-202ENST00000416372 HDAC1Q13547 482 aaPredicted RBP22.8■■□□□ 1.24
RTN4R-202ENST00000416372 SKAP1Q86WV1 359 aa22.8■■□□□ 1.24
RTN4R-202ENST00000416372 PHAXQ9H814 394 aaKnown RBP22.8■■□□□ 1.24
RTN4R-202ENST00000416372 DBF4Q9UBU7 674 aaPredicted RBP22.8■■□□□ 1.24
RTN4R-202ENST00000416372 WNK3Q9BYP7 1800 aa22.79■■□□□ 1.24
RTN4R-202ENST00000416372 PRAMEF22A3QJZ6 481 aa22.79■■□□□ 1.24
RTN4R-202ENST00000416372 ZNF496Q96IT1 587 aaPredicted RBP22.79■■□□□ 1.24
RTN4R-202ENST00000416372 FMNL2Q96PY5 1086 aa22.78■■□□□ 1.24
RTN4R-202ENST00000416372 SPATA31A1Q5TZJ5 1347 aa22.78■■□□□ 1.24
RTN4R-202ENST00000416372 SLIT2O94813 1529 aa22.78■■□□□ 1.24
RTN4R-202ENST00000416372 EXOC5O00471 708 aa22.77■■□□□ 1.24
RTN4R-202ENST00000416372 ANP32EQ9BTT0 268 aa22.77■■□□□ 1.24
RTN4R-202ENST00000416372 C1orf115Q9H7X2 142 aa22.77■■□□□ 1.24
RTN4R-202ENST00000416372 THRAP3Q9Y2W1 955 aaKnown RBP22.77■■□□□ 1.24
RTN4R-202ENST00000416372 C5P01031 1676 aa22.77■■□□□ 1.24
RTN4R-202ENST00000416372 CDCA7Q9BWT1 371 aaPredicted RBP22.76■■□□□ 1.23
RTN4R-202ENST00000416372 ANXA1P04083 346 aa22.76■■□□□ 1.23
RTN4R-202ENST00000416372 SNRPA1P09661 255 aaKnown RBP22.76■■□□□ 1.23
RTN4R-202ENST00000416372 CCDC9Q9Y3X0 531 aaKnown RBP22.75■■□□□ 1.23
RTN4R-202ENST00000416372 SPATA31A5Q5VU36 1347 aa22.74■■□□□ 1.23
RTN4R-202ENST00000416372 SPATA31A7Q8IWB4 1347 aa22.74■■□□□ 1.23
RTN4R-202ENST00000416372 TOGARAM1Q9Y4F4 1720 aa22.74■■□□□ 1.23
RTN4R-202ENST00000416372 NGLY1Q96IV0 654 aa22.73■■□□□ 1.23
RTN4R-202ENST00000416372 HYPKQ9NX55 129 aa22.73■■□□□ 1.23
RTN4R-202ENST00000416372 PXDNLA1KZ92 1463 aa22.73■■□□□ 1.23
RTN4R-202ENST00000416372 PROSER3Q2NL68 480 aa22.73■■□□□ 1.23
RTN4R-202ENST00000416372 C8orf37Q96NL8 207 aa22.73■■□□□ 1.23
RTN4R-202ENST00000416372 DDX21Q9NR30 783 aaKnown RBP eCLIP22.73■■□□□ 1.23
RTN4R-202ENST00000416372 TMOD3Q9NYL9 352 aa22.73■■□□□ 1.23
RTN4R-202ENST00000416372 SPATA31A6Q5VVP1 1343 aa22.73■■□□□ 1.23
RTN4R-202ENST00000416372 RGS3P49796 1198 aa22.72■■□□□ 1.23
RTN4R-202ENST00000416372 MEIS3Q99687 375 aa22.72■■□□□ 1.23
RTN4R-202ENST00000416372 TNS2Q63HR2 1409 aa22.72■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms