RNA–Protein interactions for RNA: ENST00000414883.1

A1CF-208, Transcript of APOBEC1 complementation factor, humanhuman

TSL 5

Gene A1CF, Length 885 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-208ENST00000414883 PPP2R1AP30153 589 aa14.78□□□□□ -0.04
A1CF-208ENST00000414883 AMIGO3Q86WK7 504 aa14.78□□□□□ -0.04
A1CF-208ENST00000414883 ATG3Q9NT62 314 aa14.78□□□□□ -0.04
A1CF-208ENST00000414883 TMOD3Q9NYL9 352 aa14.78□□□□□ -0.04
A1CF-208ENST00000414883 SMARCC1Q92922 1105 aaPredicted RBP14.77□□□□□ -0.05
A1CF-208ENST00000414883 SLC4A9Q96Q91 983 aa14.77□□□□□ -0.05
A1CF-208ENST00000414883 MRC1P22897 1456 aa14.76□□□□□ -0.05
A1CF-208ENST00000414883 COL5A3P25940 1745 aaPredicted RBP14.76□□□□□ -0.05
A1CF-208ENST00000414883 LOC102724428A0A0B4J2F2 783 aa14.76□□□□□ -0.05
A1CF-208ENST00000414883 HSP90AB1P08238 724 aaKnown RBP14.76□□□□□ -0.05
A1CF-208ENST00000414883 SIK1P57059 783 aa14.76□□□□□ -0.05
A1CF-208ENST00000414883 MTFR1LQ9H019 292 aa14.76□□□□□ -0.05
A1CF-208ENST00000414883 ATF5Q9Y2D1 282 aaPredicted RBP14.76□□□□□ -0.05
A1CF-208ENST00000414883 MYH14Q7Z406 1995 aaKnown RBP14.75□□□□□ -0.05
A1CF-208ENST00000414883 ITPK1Q13572 414 aa14.75□□□□□ -0.05
A1CF-208ENST00000414883 MTHFSDQ2M296 383 aaKnown RBP14.75□□□□□ -0.05
A1CF-208ENST00000414883 AKAP4Q5JQC9 854 aa14.74□□□□□ -0.05
A1CF-208ENST00000414883 LINC00116Q8NCU8 138 aa14.74□□□□□ -0.05
A1CF-208ENST00000414883 LGR6Q9HBX8 967 aa14.74□□□□□ -0.05
A1CF-208ENST00000414883 TFCP2L1Q9NZI6 479 aa14.74□□□□□ -0.05
A1CF-208ENST00000414883 CICQ96RK0 1608 aaPredicted RBP14.74□□□□□ -0.05
A1CF-208ENST00000414883 SIPA1L3O60292 1781 aaPredicted RBP14.73□□□□□ -0.05
A1CF-208ENST00000414883 C1orf141Q5JVX7 400 aa14.73□□□□□ -0.05
A1CF-208ENST00000414883 COL23A1Q86Y22 540 aaPredicted RBP14.73□□□□□ -0.05
A1CF-208ENST00000414883 TJP1Q07157 1748 aa14.72□□□□□ -0.05
A1CF-208ENST00000414883 NFATC2IPQ8NCF5 419 aa14.72□□□□□ -0.05
A1CF-208ENST00000414883 SLC16A10Q8TF71 515 aa14.72□□□□□ -0.05
A1CF-208ENST00000414883 RSPH6AQ9H0K4 717 aa14.72□□□□□ -0.05
A1CF-208ENST00000414883 U2SURPO15042 1029 aaKnown RBP14.71□□□□□ -0.05
A1CF-208ENST00000414883 RNMTO43148 476 aaKnown RBP14.71□□□□□ -0.05
A1CF-208ENST00000414883 CABP4P57796 275 aa14.71□□□□□ -0.05
A1CF-208ENST00000414883 SMIM5Q71RC9 77 aa14.71□□□□□ -0.05
A1CF-208ENST00000414883 PHACTR3Q96KR7 559 aa14.71□□□□□ -0.05
A1CF-208ENST00000414883 FOXD4L1Q9NU39 408 aa14.71□□□□□ -0.05
A1CF-208ENST00000414883 UBR2Q8IWV8 1755 aa14.7□□□□□ -0.06
A1CF-208ENST00000414883 SLC52A2Q9HAB3 445 aa14.7□□□□□ -0.06
A1CF-208ENST00000414883 ATP6V1AP38606 617 aa14.69□□□□□ -0.06
A1CF-208ENST00000414883 DDX10Q13206 875 aaKnown RBP14.69□□□□□ -0.06
A1CF-208ENST00000414883 CFAP53Q96M91 514 aa14.69□□□□□ -0.06
A1CF-208ENST00000414883 KCPQ6ZWJ8 1503 aa14.69□□□□□ -0.06
A1CF-208ENST00000414883 IL17REQ8NFR9 667 aa14.68□□□□□ -0.06
A1CF-208ENST00000414883 PPP1R1BQ9UD71 204 aaPredicted RBP14.68□□□□□ -0.06
A1CF-208ENST00000414883 PRKAR2BP31323 418 aa14.67□□□□□ -0.06
A1CF-208ENST00000414883 ARXQ96QS3 562 aa14.67□□□□□ -0.06
A1CF-208ENST00000414883 CEMIPQ8WUJ3 1361 aa14.67□□□□□ -0.06
A1CF-208ENST00000414883 MAP3K5Q99683 1374 aa14.67□□□□□ -0.06
A1CF-208ENST00000414883 C4AP0C0L4 1744 aa14.66□□□□□ -0.06
A1CF-208ENST00000414883 DLG5Q8TDM6 1919 aa14.66□□□□□ -0.06
A1CF-208ENST00000414883 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.66□□□□□ -0.06
A1CF-208ENST00000414883 AK7Q96M32 723 aa14.66□□□□□ -0.06
A1CF-208ENST00000414883 FHDC1Q9C0D6 1143 aaPredicted RBP14.66□□□□□ -0.06
A1CF-208ENST00000414883 PTCD1O75127 700 aaKnown RBP14.65□□□□□ -0.06
A1CF-208ENST00000414883 FCHSD2O94868 740 aa14.65□□□□□ -0.06
A1CF-208ENST00000414883 U2AF1L5P0DN76 240 aaPredicted RBP14.65□□□□□ -0.06
A1CF-208ENST00000414883 HMGB2P26583 209 aaKnown RBP14.65□□□□□ -0.06
A1CF-208ENST00000414883 SSFA2P28290 1259 aa14.65□□□□□ -0.06
A1CF-208ENST00000414883 U2AF1Q01081 240 aaKnown RBP eCLIP14.65□□□□□ -0.06
A1CF-208ENST00000414883 RC3H1Q5TC82 1133 aaKnown RBP14.65□□□□□ -0.06
A1CF-208ENST00000414883 GAS2L2Q8NHY3 880 aa14.65□□□□□ -0.06
A1CF-208ENST00000414883 SYT17Q9BSW7 474 aa14.65□□□□□ -0.06
A1CF-208ENST00000414883 RBM42Q9BTD8 480 aaKnown RBP14.65□□□□□ -0.06
A1CF-208ENST00000414883 NUDCQ9Y266 331 aa14.65□□□□□ -0.06
A1CF-208ENST00000414883 CNTNAP4Q9C0A0 1308 aa14.65□□□□□ -0.06
A1CF-208ENST00000414883 GNAT3A8MTJ3 354 aa14.64□□□□□ -0.07
A1CF-208ENST00000414883 SLC39A6Q13433 755 aa14.64□□□□□ -0.07
A1CF-208ENST00000414883 MSL1Q68DK7 614 aa14.64□□□□□ -0.07
A1CF-208ENST00000414883 FLAD1Q8NFF5 587 aa14.64□□□□□ -0.07
A1CF-208ENST00000414883 GNPATO15228 680 aa14.63□□□□□ -0.07
A1CF-208ENST00000414883 RALBP1Q15311 655 aa14.63□□□□□ -0.07
A1CF-208ENST00000414883 PLEKHF1Q96S99 279 aa14.63□□□□□ -0.07
A1CF-208ENST00000414883 PHF14O94880 888 aa14.62□□□□□ -0.07
A1CF-208ENST00000414883 CRKLP46109 303 aaKnown RBP14.61□□□□□ -0.07
A1CF-208ENST00000414883 INTS5Q6P9B9 1019 aaKnown RBP14.61□□□□□ -0.07
A1CF-208ENST00000414883 RPS6KA4O75676 772 aa14.6□□□□□ -0.07
A1CF-208ENST00000414883 POLD1P28340 1107 aa14.6□□□□□ -0.07
A1CF-208ENST00000414883 ZEB1P37275 1124 aaPredicted RBP14.6□□□□□ -0.07
A1CF-208ENST00000414883 DNAJC10Q8IXB1 793 aa14.6□□□□□ -0.07
A1CF-208ENST00000414883 RNF39Q9H2S5 420 aa14.6□□□□□ -0.07
A1CF-208ENST00000414883 CYP19A1P11511 503 aaPredicted RBP14.59□□□□□ -0.07
A1CF-208ENST00000414883 ARHGEF1Q92888 912 aaKnown RBP14.59□□□□□ -0.07
A1CF-208ENST00000414883 RTCBQ9Y3I0 505 aaKnown RBP14.59□□□□□ -0.07
A1CF-208ENST00000414883 MYBBP1AQ9BQG0 1328 aaKnown RBP14.59□□□□□ -0.07
A1CF-208ENST00000414883 KIF13BQ9NQT8 1826 aa14.58□□□□□ -0.08
A1CF-208ENST00000414883 VSIG10Q8N0Z9 540 aa14.58□□□□□ -0.08
A1CF-208ENST00000414883 NLGN2Q8NFZ4 835 aa14.58□□□□□ -0.08
A1CF-208ENST00000414883 KCNQ3O43525 872 aa14.57□□□□□ -0.08
A1CF-208ENST00000414883 DCTN1Q14203 1278 aa14.57□□□□□ -0.08
A1CF-208ENST00000414883 TRAPPC3LQ5T215 181 aa14.57□□□□□ -0.08
A1CF-208ENST00000414883 ZNF790Q6PG37 636 aa14.57□□□□□ -0.08
A1CF-208ENST00000414883 MCM10Q7L590 875 aa14.57□□□□□ -0.08
A1CF-208ENST00000414883 ZNF496Q96IT1 587 aaPredicted RBP14.57□□□□□ -0.08
A1CF-208ENST00000414883 KIAA1551Q9HCM1 1747 aa14.57□□□□□ -0.08
A1CF-208ENST00000414883 HTATSF1O43719 755 aaKnown RBP14.56□□□□□ -0.08
A1CF-208ENST00000414883 GYS1P13807 737 aa14.56□□□□□ -0.08
A1CF-208ENST00000414883 TEFQ10587 303 aa14.56□□□□□ -0.08
A1CF-208ENST00000414883 PRKRIP1Q9H875 184 aaPredicted RBP14.56□□□□□ -0.08
A1CF-208ENST00000414883 SOS1Q07889 1333 aaPredicted RBP14.56□□□□□ -0.08
A1CF-208ENST00000414883 KDM3BQ7LBC6 1761 aa14.55□□□□□ -0.08
A1CF-208ENST00000414883 CCDC87Q9NVE4 849 aa14.55□□□□□ -0.08
A1CF-208ENST00000414883 HEG1Q9ULI3 1381 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms