RNA–Protein interactions for RNA: ENST00000414786.6

SHANK3-202, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

TSL 5

Gene SHANK3, Length 7,394 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-202ENST00000414786 ISM2Q6H9L7 571 aa21.57■■□□□ 1.04
SHANK3-202ENST00000414786 TRERF1Q96PN7 1200 aa21.57■■□□□ 1.04
SHANK3-202ENST00000414786 LETM1O95202 739 aaPredicted RBP21.57■■□□□ 1.04
SHANK3-202ENST00000414786 ZNF444Q8N0Y2 327 aaPredicted RBP21.57■■□□□ 1.04
SHANK3-202ENST00000414786 ZNF397Q8NF99 534 aaPredicted RBP21.57■■□□□ 1.04
SHANK3-202ENST00000414786 CAVIN4Q5BKX8 364 aa21.57■■□□□ 1.04
SHANK3-202ENST00000414786 NGLY1Q96IV0 654 aa21.57■■□□□ 1.04
SHANK3-202ENST00000414786 FERMT3Q86UX7 667 aa21.56■■□□□ 1.04
SHANK3-202ENST00000414786 AKNAD1Q5T1N1 836 aa21.56■■□□□ 1.04
SHANK3-202ENST00000414786 FAM212AQ96EL1 285 aa21.56■■□□□ 1.04
SHANK3-202ENST00000414786 PDZRN3Q9UPQ7 1066 aa21.56■■□□□ 1.04
SHANK3-202ENST00000414786 TDRD12Q587J7 1177 aaKnown RBP21.56■■□□□ 1.04
SHANK3-202ENST00000414786 CDCA7LQ96GN5 454 aa21.55■■□□□ 1.04
SHANK3-202ENST00000414786 CCDC192P0DO97 292 aa21.55■■□□□ 1.04
SHANK3-202ENST00000414786 PDCP20941 246 aa21.55■■□□□ 1.04
SHANK3-202ENST00000414786 PRC1O43663 620 aa21.55■■□□□ 1.04
SHANK3-202ENST00000414786 CCDC18Q5T9S5 1454 aa21.55■■□□□ 1.04
SHANK3-202ENST00000414786 PROCA1Q8NCQ7 364 aaPredicted RBP21.54■■□□□ 1.04
SHANK3-202ENST00000414786 EP400NLQ6ZTU2 488 aa21.54■■□□□ 1.04
SHANK3-202ENST00000414786 BLOC1S2Q6QNY1 142 aa21.54■■□□□ 1.04
SHANK3-202ENST00000414786 SYCP3Q8IZU3 236 aa21.54■■□□□ 1.04
SHANK3-202ENST00000414786 ARHGAP29Q52LW3 1261 aa21.54■■□□□ 1.04
SHANK3-202ENST00000414786 UPF3BQ9BZI7 483 aaKnown RBP21.54■■□□□ 1.04
SHANK3-202ENST00000414786 MIA2Q96PC5 1412 aa21.54■■□□□ 1.04
SHANK3-202ENST00000414786 GJC1P36383 396 aa21.54■■□□□ 1.04
SHANK3-202ENST00000414786 ADAMTS8Q9UP79 889 aa21.54■■□□□ 1.04
SHANK3-202ENST00000414786 RNF187Q5TA31 235 aaPredicted RBP21.53■■□□□ 1.04
SHANK3-202ENST00000414786 CASTP20810 708 aaKnown RBP21.53■■□□□ 1.04
SHANK3-202ENST00000414786 PANK2Q9BZ23 570 aa21.53■■□□□ 1.04
SHANK3-202ENST00000414786 SPA17Q15506 151 aa21.53■■□□□ 1.04
SHANK3-202ENST00000414786 MYD88Q99836 296 aa21.53■■□□□ 1.04
SHANK3-202ENST00000414786 SH3BP5O60239 455 aa21.52■■□□□ 1.04
SHANK3-202ENST00000414786 STAC3Q96MF2 364 aa21.52■■□□□ 1.04
SHANK3-202ENST00000414786 TSG101Q99816 390 aa21.52■■□□□ 1.04
SHANK3-202ENST00000414786 RFX1P22670 979 aa21.52■■□□□ 1.04
SHANK3-202ENST00000414786 LUZP1Q86V48 1076 aa21.52■■□□□ 1.04
SHANK3-202ENST00000414786 TCP11L2Q8N4U5 519 aa21.52■■□□□ 1.04
SHANK3-202ENST00000414786 PRKRIP1Q9H875 184 aaPredicted RBP21.52■■□□□ 1.04
SHANK3-202ENST00000414786 SRCIN1Q9C0H9 1055 aa21.52■■□□□ 1.04
SHANK3-202ENST00000414786 LRSAM1Q6UWE0 723 aa21.52■■□□□ 1.04
SHANK3-202ENST00000414786 CDK19Q9BWU1 502 aa21.52■■□□□ 1.04
SHANK3-202ENST00000414786 NLRP5P59047 1200 aa21.52■■□□□ 1.03
SHANK3-202ENST00000414786 TMOD3Q9NYL9 352 aa21.51■■□□□ 1.03
SHANK3-202ENST00000414786 IMMTQ16891 758 aaKnown RBP21.51■■□□□ 1.03
SHANK3-202ENST00000414786 JARID2Q92833 1246 aaPredicted RBP21.51■■□□□ 1.03
SHANK3-202ENST00000414786 BOLA2Q9H3K6 86 aa21.51■■□□□ 1.03
SHANK3-202ENST00000414786 CCDC148Q8NFR7 591 aa21.5■■□□□ 1.03
SHANK3-202ENST00000414786 PAIP2Q9BPZ3 127 aaKnown RBP21.5■■□□□ 1.03
SHANK3-202ENST00000414786 SYNCQ9H7C4 482 aa21.5■■□□□ 1.03
SHANK3-202ENST00000414786 KIF7Q2M1P5 1343 aa21.5■■□□□ 1.03
SHANK3-202ENST00000414786 SMARCA5O60264 1052 aaPredicted RBP21.5■■□□□ 1.03
SHANK3-202ENST00000414786 ATP2C2O75185 946 aa21.5■■□□□ 1.03
SHANK3-202ENST00000414786 TMCO3Q6UWJ1 677 aa21.5■■□□□ 1.03
SHANK3-202ENST00000414786 CABP1Q9NZU7 370 aa21.5■■□□□ 1.03
SHANK3-202ENST00000414786 CBFA2T2O43439 604 aa21.5■■□□□ 1.03
SHANK3-202ENST00000414786 STARD3NLO95772 234 aa21.5■■□□□ 1.03
SHANK3-202ENST00000414786 PRKCSHP14314 528 aaPredicted RBP21.5■■□□□ 1.03
SHANK3-202ENST00000414786 KRT85P78386 507 aa21.5■■□□□ 1.03
SHANK3-202ENST00000414786 TMCO4Q5TGY1 634 aa21.49■■□□□ 1.03
SHANK3-202ENST00000414786 TXLNBQ8N3L3 684 aa21.49■■□□□ 1.03
SHANK3-202ENST00000414786 CCDC66A2RUB6 948 aa21.49■■□□□ 1.03
SHANK3-202ENST00000414786 CDKL5O76039 1030 aa21.49■■□□□ 1.03
SHANK3-202ENST00000414786 ERLIN1O75477 346 aa21.49■■□□□ 1.03
SHANK3-202ENST00000414786 EIF3JO75822 258 aaKnown RBP21.49■■□□□ 1.03
SHANK3-202ENST00000414786 CIZ1Q9ULV3 898 aaPredicted RBP21.49■■□□□ 1.03
SHANK3-202ENST00000414786 FERP16591 822 aa21.49■■□□□ 1.03
SHANK3-202ENST00000414786 SIRT1Q96EB6 747 aa21.48■■□□□ 1.03
SHANK3-202ENST00000414786 BRPF3Q9ULD4 1205 aa21.48■■□□□ 1.03
SHANK3-202ENST00000414786 PPM1EQ8WY54 764 aa21.48■■□□□ 1.03
SHANK3-202ENST00000414786 CCDC83Q8IWF9 413 aa21.48■■□□□ 1.03
SHANK3-202ENST00000414786 NOP2P46087 812 aaKnown RBP21.47■■□□□ 1.03
SHANK3-202ENST00000414786 CCT2P78371 535 aaKnown RBP21.47■■□□□ 1.03
SHANK3-202ENST00000414786 NAPBQ9H115 298 aa21.47■■□□□ 1.03
SHANK3-202ENST00000414786 NUP88Q99567 741 aaPredicted RBP21.47■■□□□ 1.03
SHANK3-202ENST00000414786 ZWINTO95229 277 aa21.47■■□□□ 1.03
SHANK3-202ENST00000414786 CFAP70Q5T0N1 1121 aa21.47■■□□□ 1.03
SHANK3-202ENST00000414786 PPP1R14CQ8TAE6 165 aa21.47■■□□□ 1.03
SHANK3-202ENST00000414786 FKBP15Q5T1M5 1219 aa21.46■■□□□ 1.03
SHANK3-202ENST00000414786 IQCEQ6IPM2 695 aa21.46■■□□□ 1.03
SHANK3-202ENST00000414786 HLTFQ14527 1009 aaKnown RBP eCLIP21.46■■□□□ 1.033e-10■■■□□ 15.1
SHANK3-202ENST00000414786 ANKRD1Q15327 319 aa21.46■■□□□ 1.03
SHANK3-202ENST00000414786 PRDM10Q9NQV6 1147 aa21.46■■□□□ 1.03
SHANK3-202ENST00000414786 TAF12Q16514 161 aa21.46■■□□□ 1.03
SHANK3-202ENST00000414786 SPECC1Q5M775 1068 aa21.46■■□□□ 1.03
SHANK3-202ENST00000414786 ZNF652Q9Y2D9 606 aa21.46■■□□□ 1.03
SHANK3-202ENST00000414786 ZNF408Q9H9D4 720 aa21.45■■□□□ 1.02
SHANK3-202ENST00000414786 TRMT112Q9UI30 125 aaKnown RBP21.45■■□□□ 1.02
SHANK3-202ENST00000414786 SP4Q02446 784 aa21.45■■□□□ 1.02
SHANK3-202ENST00000414786 FAM107BQ9H098 131 aa21.45■■□□□ 1.02
SHANK3-202ENST00000414786 MYO1BO43795 1136 aa21.45■■□□□ 1.02
SHANK3-202ENST00000414786 UQCRHP07919 91 aa21.45■■□□□ 1.02
SHANK3-202ENST00000414786 IDEP14735 1019 aa21.45■■□□□ 1.02
SHANK3-202ENST00000414786 PDS5BQ9NTI5 1447 aa21.45■■□□□ 1.02
SHANK3-202ENST00000414786 PSMC4P43686 418 aa21.45■■□□□ 1.02
SHANK3-202ENST00000414786 TMEM110-MUSTN1A8MSY1 372 aa21.45■■□□□ 1.02
SHANK3-202ENST00000414786 CASQ1P31415 396 aa21.45■■□□□ 1.02
SHANK3-202ENST00000414786 TSNARE1Q96NA8 513 aa21.45■■□□□ 1.02
SHANK3-202ENST00000414786 PTPRGP23470 1445 aa21.44■■□□□ 1.02
SHANK3-202ENST00000414786 CRACR2AQ9BSW2 395 aa21.44■■□□□ 1.02
SHANK3-202ENST00000414786 EXOC6BQ9Y2D4 811 aa21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms