RNA–Protein interactions for RNA: ENST00000414670.2

ITGB1-203, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 500 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-203ENST00000414670 PCDH11XQ9BZA7 1347 aa7.97□□□□□ -1.13
ITGB1-203ENST00000414670 PCDH11YQ9BZA8 1340 aa7.97□□□□□ -1.13
ITGB1-203ENST00000414670 COL14A1Q05707 1796 aaKnown RBP7.97□□□□□ -1.13
ITGB1-203ENST00000414670 BTBD11A6QL63 1104 aa7.96□□□□□ -1.14
ITGB1-203ENST00000414670 MS4A1P11836 297 aa7.96□□□□□ -1.14
ITGB1-203ENST00000414670 FRAT1Q92837 279 aaPredicted RBP7.96□□□□□ -1.14
ITGB1-203ENST00000414670 C8orf37Q96NL8 207 aa7.96□□□□□ -1.14
ITGB1-203ENST00000414670 CDCA7Q9BWT1 371 aaPredicted RBP7.96□□□□□ -1.14
ITGB1-203ENST00000414670 SLIT2O94813 1529 aa7.96□□□□□ -1.14
ITGB1-203ENST00000414670 SPATA31A1Q5TZJ5 1347 aa7.96□□□□□ -1.14
ITGB1-203ENST00000414670 TCERG1O14776 1098 aaKnown RBP7.95□□□□□ -1.14
ITGB1-203ENST00000414670 BRPF1P55201 1214 aaPredicted RBP7.95□□□□□ -1.14
ITGB1-203ENST00000414670 PDE3AQ14432 1141 aa7.95□□□□□ -1.14
ITGB1-203ENST00000414670 NKX1-1Q15270 411 aaPredicted RBP7.95□□□□□ -1.14
ITGB1-203ENST00000414670 KRT24Q2M2I5 525 aa7.95□□□□□ -1.14
ITGB1-203ENST00000414670 C20orf194Q5TEA3 1177 aa7.95□□□□□ -1.14
ITGB1-203ENST00000414670 ZKSCAN2Q63HK3 967 aa7.95□□□□□ -1.14
ITGB1-203ENST00000414670 UNC5CLQ8IV45 518 aa7.95□□□□□ -1.14
ITGB1-203ENST00000414670 FNBP4Q8N3X1 1017 aaPredicted RBP7.95□□□□□ -1.14
ITGB1-203ENST00000414670 DDX54Q8TDD1 881 aaKnown RBP7.95□□□□□ -1.14
ITGB1-203ENST00000414670 SLC52A2Q9HAB3 445 aa7.95□□□□□ -1.14
ITGB1-203ENST00000414670 ANO8Q9HCE9 1232 aaPredicted RBP7.95□□□□□ -1.14
ITGB1-203ENST00000414670 THRAP3Q9Y2W1 955 aaKnown RBP7.95□□□□□ -1.14
ITGB1-203ENST00000414670 SOS1Q07889 1333 aaPredicted RBP7.95□□□□□ -1.14
ITGB1-203ENST00000414670 KIF16BQ96L93 1317 aa7.95□□□□□ -1.14
ITGB1-203ENST00000414670 DISP2A7MBM2 1401 aa7.95□□□□□ -1.14
ITGB1-203ENST00000414670 KDM6AO15550 1401 aaPredicted RBP7.95□□□□□ -1.14
ITGB1-203ENST00000414670 EXOC5O00471 708 aa7.94□□□□□ -1.14
ITGB1-203ENST00000414670 IPO8O15397 1037 aaKnown RBP7.94□□□□□ -1.14
ITGB1-203ENST00000414670 CABP4P57796 275 aa7.94□□□□□ -1.14
ITGB1-203ENST00000414670 EIF4A1P60842 406 aaKnown RBP7.94□□□□□ -1.14
ITGB1-203ENST00000414670 MEX3CQ5U5Q3 659 aaKnown RBP7.94□□□□□ -1.14
ITGB1-203ENST00000414670 MRPL50Q8N5N7 158 aaKnown RBP7.94□□□□□ -1.14
ITGB1-203ENST00000414670 EXOC6Q8TAG9 804 aa7.94□□□□□ -1.14
ITGB1-203ENST00000414670 CRBNQ96SW2 442 aa7.94□□□□□ -1.14
ITGB1-203ENST00000414670 CCDC9Q9Y3X0 531 aaKnown RBP7.94□□□□□ -1.14
ITGB1-203ENST00000414670 SPATA31A5Q5VU36 1347 aa7.94□□□□□ -1.14
ITGB1-203ENST00000414670 SPATA31A7Q8IWB4 1347 aa7.94□□□□□ -1.14
ITGB1-203ENST00000414670 RGPD2P0DJD1 1756 aa7.94□□□□□ -1.14
ITGB1-203ENST00000414670 RGPD5Q99666 1765 aa7.94□□□□□ -1.14
ITGB1-203ENST00000414670 LRRC37A3O60309 1634 aa7.93□□□□□ -1.14
ITGB1-203ENST00000414670 ERVV-2B6SEH9 535 aa7.93□□□□□ -1.14
ITGB1-203ENST00000414670 KCNQ3O43525 872 aa7.93□□□□□ -1.14
ITGB1-203ENST00000414670 VPS72Q15906 364 aa7.93□□□□□ -1.14
ITGB1-203ENST00000414670 B4GALNT3Q6L9W6 998 aa7.93□□□□□ -1.14
ITGB1-203ENST00000414670 ATF7IPQ6VMQ6 1270 aa7.93□□□□□ -1.14
ITGB1-203ENST00000414670 BARGINQ6ZT62 677 aa7.93□□□□□ -1.14
ITGB1-203ENST00000414670 NFATC2IPQ8NCF5 419 aa7.93□□□□□ -1.14
ITGB1-203ENST00000414670 USP21Q9UK80 565 aa7.93□□□□□ -1.14
ITGB1-203ENST00000414670 NOB1Q9ULX3 412 aaKnown RBP7.93□□□□□ -1.14
ITGB1-203ENST00000414670 LRP6O75581 1613 aa7.92□□□□□ -1.14
ITGB1-203ENST00000414670 HOXB7P09629 217 aa7.92□□□□□ -1.14
ITGB1-203ENST00000414670 DDB1Q16531 1140 aa7.92□□□□□ -1.14
ITGB1-203ENST00000414670 ZNF790Q6PG37 636 aa7.92□□□□□ -1.14
ITGB1-203ENST00000414670 DZIP1LQ8IYY4 767 aaKnown RBP7.92□□□□□ -1.14
ITGB1-203ENST00000414670 PANK1Q8TE04 598 aa7.92□□□□□ -1.14
ITGB1-203ENST00000414670 ARHGAP45Q92619 1136 aa7.92□□□□□ -1.14
ITGB1-203ENST00000414670 CCDC136Q96JN2 1154 aa7.92□□□□□ -1.14
ITGB1-203ENST00000414670 CHMP4AQ9BY43 222 aa7.92□□□□□ -1.14
ITGB1-203ENST00000414670 BCL9LQ86UU0 1499 aa7.92□□□□□ -1.14
ITGB1-203ENST00000414670 TRIM27P14373 513 aa7.91□□□□□ -1.14
ITGB1-203ENST00000414670 SLC39A6Q13433 755 aa7.91□□□□□ -1.14
ITGB1-203ENST00000414670 HDGFL1Q5TGJ6 251 aa7.91□□□□□ -1.14
ITGB1-203ENST00000414670 CCDC30Q5VVM6 783 aa7.91□□□□□ -1.14
ITGB1-203ENST00000414670 FTSJ3Q8IY81 847 aaKnown RBP7.91□□□□□ -1.14
ITGB1-203ENST00000414670 TTC5Q8N0Z6 440 aa7.91□□□□□ -1.14
ITGB1-203ENST00000414670 CLUAP1Q96AJ1 413 aa7.91□□□□□ -1.14
ITGB1-203ENST00000414670 STK31Q9BXU1 1019 aa7.91□□□□□ -1.14
ITGB1-203ENST00000414670 API5Q9BZZ5 524 aaKnown RBP7.91□□□□□ -1.14
ITGB1-203ENST00000414670 RNF216Q9NWF9 866 aaPredicted RBP7.91□□□□□ -1.14
ITGB1-203ENST00000414670 TNNQ9UQP3 1299 aa7.91□□□□□ -1.14
ITGB1-203ENST00000414670 DLG5Q8TDM6 1919 aa7.91□□□□□ -1.14
ITGB1-203ENST00000414670 PKD1L3Q7Z443 1732 aa7.9□□□□□ -1.14
ITGB1-203ENST00000414670 MRC1P22897 1456 aa7.9□□□□□ -1.14
ITGB1-203ENST00000414670 TNS2Q63HR2 1409 aa7.9□□□□□ -1.14
ITGB1-203ENST00000414670 HEG1Q9ULI3 1381 aa7.9□□□□□ -1.14
ITGB1-203ENST00000414670 AFF2P51816 1311 aa7.9□□□□□ -1.14
ITGB1-203ENST00000414670 GIGYF1O75420 1035 aaPredicted RBP7.9□□□□□ -1.14
ITGB1-203ENST00000414670 SLC4A2P04920 1241 aa7.9□□□□□ -1.14
ITGB1-203ENST00000414670 RLBP1P12271 317 aa7.9□□□□□ -1.14
ITGB1-203ENST00000414670 COG6Q9Y2V7 657 aa7.9□□□□□ -1.14
ITGB1-203ENST00000414670 PARP4Q9UKK3 1724 aaKnown RBP7.89□□□□□ -1.15
ITGB1-203ENST00000414670 PLCH1Q4KWH8 1693 aa7.89□□□□□ -1.15
ITGB1-203ENST00000414670 ADAMTS7Q9UKP4 1686 aa7.89□□□□□ -1.15
ITGB1-203ENST00000414670 PTPRCP08575 1304 aa7.89□□□□□ -1.15
ITGB1-203ENST00000414670 EIF2S2P20042 333 aaKnown RBP7.89□□□□□ -1.15
ITGB1-203ENST00000414670 MVPQ14764 893 aaKnown RBP7.89□□□□□ -1.15
ITGB1-203ENST00000414670 FAM98CQ17RN3 349 aaKnown RBP7.89□□□□□ -1.15
ITGB1-203ENST00000414670 NECTIN2Q92692 538 aa7.89□□□□□ -1.15
ITGB1-203ENST00000414670 ZNF496Q96IT1 587 aaPredicted RBP7.89□□□□□ -1.15
ITGB1-203ENST00000414670 FMNL2Q96PY5 1086 aa7.89□□□□□ -1.15
ITGB1-203ENST00000414670 TMOD3Q9NYL9 352 aa7.89□□□□□ -1.15
ITGB1-203ENST00000414670 NRAPQ86VF7 1730 aa7.89□□□□□ -1.15
ITGB1-203ENST00000414670 SNRPA1P09661 255 aaKnown RBP7.88□□□□□ -1.15
ITGB1-203ENST00000414670 AAMPQ13685 434 aa7.88□□□□□ -1.15
ITGB1-203ENST00000414670 G2E3Q7L622 706 aa7.88□□□□□ -1.15
ITGB1-203ENST00000414670 TMEM57Q8N5G2 664 aa7.88□□□□□ -1.15
ITGB1-203ENST00000414670 MARCH10Q8NA82 808 aaPredicted RBP7.88□□□□□ -1.15
ITGB1-203ENST00000414670 DDRGK1Q96HY6 314 aa7.88□□□□□ -1.15
ITGB1-203ENST00000414670 GJD4Q96KN9 370 aaPredicted RBP7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms