RNA–Protein interactions for RNA: ENST00000414620.1

ACTB-202, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 561 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-202ENST00000414620 ATG3Q9NT62 314 aa21.17■□□□□ 0.98
ACTB-202ENST00000414620 IL13P35225 146 aa21.16■□□□□ 0.98
ACTB-202ENST00000414620 ATP6V1AP38606 617 aa21.16■□□□□ 0.98
ACTB-202ENST00000414620 ITPK1Q13572 414 aa21.16■□□□□ 0.98
ACTB-202ENST00000414620 ZNF831Q5JPB2 1677 aa21.15■□□□□ 0.98
ACTB-202ENST00000414620 HSP90AB1P08238 724 aaKnown RBP21.15■□□□□ 0.98
ACTB-202ENST00000414620 HMGB2P26583 209 aaKnown RBP21.15■□□□□ 0.98
ACTB-202ENST00000414620 GPR162Q16538 588 aa21.15■□□□□ 0.98
ACTB-202ENST00000414620 FLAD1Q8NFF5 587 aa21.15■□□□□ 0.98
ACTB-202ENST00000414620 KDRP35968 1356 aa21.14■□□□□ 0.98
ACTB-202ENST00000414620 MTHFSP49914 203 aa21.14■□□□□ 0.97
ACTB-202ENST00000414620 AMOTQ4VCS5 1084 aa21.14■□□□□ 0.97
ACTB-202ENST00000414620 DCAF5Q96JK2 942 aa21.14■□□□□ 0.97
ACTB-202ENST00000414620 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.13■□□□□ 0.97
ACTB-202ENST00000414620 C1orf141Q5JVX7 400 aa21.13■□□□□ 0.97
ACTB-202ENST00000414620 RBM42Q9BTD8 480 aaKnown RBP21.13■□□□□ 0.97
ACTB-202ENST00000414620 ERVV-2B6SEH9 535 aa21.12■□□□□ 0.97
ACTB-202ENST00000414620 GNPATO15228 680 aa21.12■□□□□ 0.97
ACTB-202ENST00000414620 PER1O15534 1290 aaPredicted RBP21.12■□□□□ 0.97
ACTB-202ENST00000414620 CABP4P57796 275 aa21.12■□□□□ 0.97
ACTB-202ENST00000414620 MYH14Q7Z406 1995 aaKnown RBP21.12■□□□□ 0.97
ACTB-202ENST00000414620 C4AP0C0L4 1744 aa21.11■□□□□ 0.97
ACTB-202ENST00000414620 TJP1Q07157 1748 aa21.11■□□□□ 0.97
ACTB-202ENST00000414620 HMOX1P09601 288 aa21.1■□□□□ 0.97
ACTB-202ENST00000414620 SSFA2P28290 1259 aa21.1■□□□□ 0.97
ACTB-202ENST00000414620 SLC4A9Q96Q91 983 aa21.1■□□□□ 0.97
ACTB-202ENST00000414620 COL3A1P02461 1466 aaPredicted RBP21.06■□□□□ 0.96
ACTB-202ENST00000414620 DIAPH1O60610 1272 aaKnown RBP21.05■□□□□ 0.96
ACTB-202ENST00000414620 YBX3P16989 372 aaKnown RBP eCLIP21.05■□□□□ 0.964e-79■□□□□ 9.7
ACTB-202ENST00000414620 ZNF784Q8NCA9 323 aaPredicted RBP21.05■□□□□ 0.96
ACTB-202ENST00000414620 NFATC2IPQ8NCF5 419 aa21.05■□□□□ 0.96
ACTB-202ENST00000414620 CICQ96RK0 1608 aaPredicted RBP21.04■□□□□ 0.96
ACTB-202ENST00000414620 PTCD1O75127 700 aaKnown RBP21.04■□□□□ 0.96
ACTB-202ENST00000414620 ADAMTS7Q9UKP4 1686 aa21.03■□□□□ 0.96
ACTB-202ENST00000414620 AKAP4Q5JQC9 854 aa21.03■□□□□ 0.96
ACTB-202ENST00000414620 RTCBQ9Y3I0 505 aaKnown RBP21.03■□□□□ 0.96
ACTB-202ENST00000414620 N4BP2Q86UW6 1770 aaPredicted RBP21.02■□□□□ 0.96
ACTB-202ENST00000414620 KIF13BQ9NQT8 1826 aa21.02■□□□□ 0.96
ACTB-202ENST00000414620 UTRNP46939 3433 aa21.02■□□□□ 0.96
ACTB-202ENST00000414620 NPC1L1Q9UHC9 1359 aa21.02■□□□□ 0.96
ACTB-202ENST00000414620 WWC3Q9ULE0 1092 aa21.02■□□□□ 0.96
ACTB-202ENST00000414620 CD2APQ9Y5K6 639 aa21.02■□□□□ 0.96
ACTB-202ENST00000414620 CNTNAP4Q9C0A0 1308 aa21.02■□□□□ 0.95
ACTB-202ENST00000414620 MRC1P22897 1456 aa21.01■□□□□ 0.95
ACTB-202ENST00000414620 TRAPPC3LQ5T215 181 aa21.01■□□□□ 0.95
ACTB-202ENST00000414620 LGR6Q9HBX8 967 aa21.01■□□□□ 0.95
ACTB-202ENST00000414620 KIAA1551Q9HCM1 1747 aa21.01■□□□□ 0.95
ACTB-202ENST00000414620 MTHFSDQ2M296 383 aaKnown RBP21■□□□□ 0.95
ACTB-202ENST00000414620 U2SURPO15042 1029 aaKnown RBP20.99■□□□□ 0.95
ACTB-202ENST00000414620 UBR2Q8IWV8 1755 aa20.98■□□□□ 0.95
ACTB-202ENST00000414620 RNMTO43148 476 aaKnown RBP20.98■□□□□ 0.95
ACTB-202ENST00000414620 MMP10P09238 476 aa20.98■□□□□ 0.95
ACTB-202ENST00000414620 RC3H1Q5TC82 1133 aaKnown RBP20.98■□□□□ 0.95
ACTB-202ENST00000414620 ARHGEF1Q92888 912 aaKnown RBP20.98■□□□□ 0.95
ACTB-202ENST00000414620 SLC52A2Q9HAB3 445 aa20.98■□□□□ 0.95
ACTB-202ENST00000414620 RPS6KA4O75676 772 aa20.97■□□□□ 0.95
ACTB-202ENST00000414620 CRKLP46109 303 aaKnown RBP20.97■□□□□ 0.95
ACTB-202ENST00000414620 SIPA1L3O60292 1781 aaPredicted RBP20.97■□□□□ 0.95
ACTB-202ENST00000414620 KCPQ6ZWJ8 1503 aa20.96■□□□□ 0.95
ACTB-202ENST00000414620 GRIN3BO60391 1043 aa20.96■□□□□ 0.95
ACTB-202ENST00000414620 RFC4P35249 363 aa20.96■□□□□ 0.95
ACTB-202ENST00000414620 SLC39A6Q13433 755 aa20.96■□□□□ 0.95
ACTB-202ENST00000414620 ADRA2BP18089 450 aa20.95■□□□□ 0.94
ACTB-202ENST00000414620 DNAJC10Q8IXB1 793 aa20.94■□□□□ 0.94
ACTB-202ENST00000414620 BRCA1P38398 1863 aaKnown RBP20.93■□□□□ 0.94
ACTB-202ENST00000414620 GYS1P13807 737 aa20.93■□□□□ 0.94
ACTB-202ENST00000414620 NLGN1Q8N2Q7 840 aa20.92■□□□□ 0.94
ACTB-202ENST00000414620 SRP68Q9UHB9 627 aaKnown RBP20.92■□□□□ 0.94
ACTB-202ENST00000414620 PXDNLA1KZ92 1463 aa20.91■□□□□ 0.94
ACTB-202ENST00000414620 GOLGB1Q14789 3259 aaKnown RBP20.91■□□□□ 0.94
ACTB-202ENST00000414620 C10orf71Q711Q0 1435 aa20.91■□□□□ 0.94
ACTB-202ENST00000414620 INTS5Q6P9B9 1019 aaKnown RBP20.9■□□□□ 0.94
ACTB-202ENST00000414620 CFAP53Q96M91 514 aa20.89■□□□□ 0.93
ACTB-202ENST00000414620 AFDNP55196 1824 aaKnown RBP20.89■□□□□ 0.93
ACTB-202ENST00000414620 USP42Q9H9J4 1324 aaKnown RBP20.88■□□□□ 0.93
ACTB-202ENST00000414620 GAS2L2Q8NHY3 880 aa20.88■□□□□ 0.93
ACTB-202ENST00000414620 CCDC87Q9NVE4 849 aa20.88■□□□□ 0.93
ACTB-202ENST00000414620 PARP3Q9Y6F1 533 aa20.88■□□□□ 0.93
ACTB-202ENST00000414620 PPP2R1AP30153 589 aa20.87■□□□□ 0.93
ACTB-202ENST00000414620 PRKAR2BP31323 418 aa20.87■□□□□ 0.93
ACTB-202ENST00000414620 FKBP8Q14318 412 aa20.87■□□□□ 0.93
ACTB-202ENST00000414620 GNAT3A8MTJ3 354 aa20.86■□□□□ 0.93
ACTB-202ENST00000414620 ATP10DQ9P241 1426 aa20.86■□□□□ 0.93
ACTB-202ENST00000414620 SOS1Q07889 1333 aaPredicted RBP20.85■□□□□ 0.93
ACTB-202ENST00000414620 CYP19A1P11511 503 aaPredicted RBP20.85■□□□□ 0.93
ACTB-202ENST00000414620 TEFQ10587 303 aa20.85■□□□□ 0.93
ACTB-202ENST00000414620 IL17REQ8NFR9 667 aa20.85■□□□□ 0.93
ACTB-202ENST00000414620 RSPH6AQ9H0K4 717 aa20.85■□□□□ 0.93
ACTB-202ENST00000414620 ZBTB1Q9Y2K1 713 aa20.85■□□□□ 0.93
ACTB-202ENST00000414620 ARFGEF1Q9Y6D6 1849 aa20.85■□□□□ 0.93
ACTB-202ENST00000414620 DLG5Q8TDM6 1919 aa20.84■□□□□ 0.93
ACTB-202ENST00000414620 A0A0G2JLW4 131 aa20.84■□□□□ 0.93
ACTB-202ENST00000414620 USPL1Q5W0Q7 1092 aa20.84■□□□□ 0.93
ACTB-202ENST00000414620 TTC5Q8N0Z6 440 aa20.84■□□□□ 0.93
ACTB-202ENST00000414620 PHACTR3Q96KR7 559 aa20.84■□□□□ 0.93
ACTB-202ENST00000414620 COL15A1P39059 1388 aa20.84■□□□□ 0.93
ACTB-202ENST00000414620 DDR1Q08345 913 aa20.83■□□□□ 0.93
ACTB-202ENST00000414620 GIGYF1O75420 1035 aaPredicted RBP20.82■□□□□ 0.92
ACTB-202ENST00000414620 U2AF1L5P0DN76 240 aaPredicted RBP20.82■□□□□ 0.92
ACTB-202ENST00000414620 DPEP1P16444 411 aa20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms