RNA–Protein interactions for RNA: ENST00000413945.5

LINC00472-201, long intergenic non-protein coding RNA 472, humanhuman

TSL 3

Gene LINC00472, Length 662 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00472-201ENST00000413945 MEGF6O75095 1541 aa8.85□□□□□ -0.99
LINC00472-201ENST00000413945 IGSF1Q8N6C5 1336 aa8.85□□□□□ -0.99
LINC00472-201ENST00000413945 C2orf72A6NCS6 295 aa8.85□□□□□ -0.99
LINC00472-201ENST00000413945 SLC17A8Q8NDX2 589 aa8.85□□□□□ -0.99
LINC00472-201ENST00000413945 NUTM2FA1L443 756 aa8.84□□□□□ -0.99
LINC00472-201ENST00000413945 LMOD2Q6P5Q4 547 aa8.84□□□□□ -0.99
LINC00472-201ENST00000413945 KIAA0232Q92628 1395 aa8.84□□□□□ -0.99
LINC00472-201ENST00000413945 KDM2BQ8NHM5 1336 aa8.83□□□□□ -1
LINC00472-201ENST00000413945 EEA1Q15075 1411 aa8.83□□□□□ -1
LINC00472-201ENST00000413945 LARP1Q6PKG0 1096 aaKnown RBP8.83□□□□□ -1
LINC00472-201ENST00000413945 RRAGCQ9HB90 399 aa8.83□□□□□ -1
LINC00472-201ENST00000413945 LRRC4BQ9NT99 713 aa8.83□□□□□ -1
LINC00472-201ENST00000413945 NHSQ6T4R5 1651 aa8.82□□□□□ -1
LINC00472-201ENST00000413945 LMO7Q8WWI1 1683 aa8.82□□□□□ -1
LINC00472-201ENST00000413945 RGPD8O14715 1765 aaPredicted RBP8.82□□□□□ -1
LINC00472-201ENST00000413945 AKAP12Q02952 1782 aa8.82□□□□□ -1
LINC00472-201ENST00000413945 MCOLN1Q9GZU1 580 aa8.82□□□□□ -1
LINC00472-201ENST00000413945 VEGFBP49765 207 aa8.81□□□□□ -1
LINC00472-201ENST00000413945 MARCH10Q8NA82 808 aaPredicted RBP8.81□□□□□ -1
LINC00472-201ENST00000413945 QRICH2Q9H0J4 1663 aa8.81□□□□□ -1
LINC00472-201ENST00000413945 CHRNA2Q15822 529 aa8.8□□□□□ -1
LINC00472-201ENST00000413945 KNDC1Q76NI1 1749 aa8.79□□□□□ -1
LINC00472-201ENST00000413945 CLTCL1P53675 1640 aa8.79□□□□□ -1
LINC00472-201ENST00000413945 WNK3Q9BYP7 1800 aa8.78□□□□□ -1
LINC00472-201ENST00000413945 DDB1Q16531 1140 aa8.78□□□□□ -1
LINC00472-201ENST00000413945 TRPM1Q7Z4N2 1603 aa8.78□□□□□ -1
LINC00472-201ENST00000413945 THSD7BQ9C0I4 1608 aa8.78□□□□□ -1
LINC00472-201ENST00000413945 CACNA1AO00555 2505 aa8.78□□□□□ -1
LINC00472-201ENST00000413945 KIAA1551Q9HCM1 1747 aa8.77□□□□□ -1
LINC00472-201ENST00000413945 FBXO22Q8NEZ5 403 aa8.77□□□□□ -1.01
LINC00472-201ENST00000413945 RRP7BPQ9NSQ0 103 aa8.77□□□□□ -1.01
LINC00472-201ENST00000413945 E9PCH4 1651 aa8.77□□□□□ -1.01
LINC00472-201ENST00000413945 SOX10P56693 466 aa8.76□□□□□ -1.01
LINC00472-201ENST00000413945 AMER1Q5JTC6 1135 aaPredicted RBP8.76□□□□□ -1.01
LINC00472-201ENST00000413945 C9orf131Q5VYM1 1079 aa8.76□□□□□ -1.01
LINC00472-201ENST00000413945 THSD4Q6ZMP0 1018 aa8.76□□□□□ -1.01
LINC00472-201ENST00000413945 BTAF1O14981 1849 aa8.75□□□□□ -1.01
LINC00472-201ENST00000413945 PIK3C2AO00443 1686 aa8.75□□□□□ -1.01
LINC00472-201ENST00000413945 EVA1CP58658 441 aa8.75□□□□□ -1.01
LINC00472-201ENST00000413945 MAP2K1Q02750 393 aaPredicted RBP8.75□□□□□ -1.01
LINC00472-201ENST00000413945 SPOCK2Q92563 424 aa8.75□□□□□ -1.01
LINC00472-201ENST00000413945 STAC3Q96MF2 364 aa8.75□□□□□ -1.01
LINC00472-201ENST00000413945 VPS9D1Q9Y2B5 631 aa8.75□□□□□ -1.01
LINC00472-201ENST00000413945 LTBP1Q14766 1721 aa8.74□□□□□ -1.01
LINC00472-201ENST00000413945 IFT172Q9UG01 1749 aa8.74□□□□□ -1.01
LINC00472-201ENST00000413945 COL18A1P39060 1754 aa8.74□□□□□ -1.01
LINC00472-201ENST00000413945 SPATA31E1Q6ZUB1 1445 aa8.74□□□□□ -1.01
LINC00472-201ENST00000413945 MKI67P46013 3256 aaKnown RBP8.74□□□□□ -1.01
LINC00472-201ENST00000413945 RTN4Q9NQC3 1192 aaKnown RBP8.74□□□□□ -1.01
LINC00472-201ENST00000413945 TFCP2L1Q9NZI6 479 aa8.74□□□□□ -1.01
LINC00472-201ENST00000413945 COL5A2P05997 1499 aaPredicted RBP8.74□□□□□ -1.01
LINC00472-201ENST00000413945 CRB1P82279 1406 aa8.73□□□□□ -1.01
LINC00472-201ENST00000413945 UNC80Q8N2C7 3258 aa8.73□□□□□ -1.01
LINC00472-201ENST00000413945 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.73□□□□□ -1.01
LINC00472-201ENST00000413945 MSL1Q68DK7 614 aa8.73□□□□□ -1.01
LINC00472-201ENST00000413945 IFNLR1Q8IU57 520 aaPredicted RBP8.73□□□□□ -1.01
LINC00472-201ENST00000413945 ZFP91Q96JP5 570 aaPredicted RBP8.73□□□□□ -1.01
LINC00472-201ENST00000413945 VEGFAP15692 232 aaPredicted RBP8.72□□□□□ -1.01
LINC00472-201ENST00000413945 COL23A1Q86Y22 540 aaPredicted RBP8.72□□□□□ -1.01
LINC00472-201ENST00000413945 NBPF15Q8N660 670 aa8.72□□□□□ -1.01
LINC00472-201ENST00000413945 ANKRD30BQ9BXX2 1392 aa8.72□□□□□ -1.01
LINC00472-201ENST00000413945 MYOM3Q5VTT5 1437 aa8.71□□□□□ -1.01
LINC00472-201ENST00000413945 SLC27A3Q5K4L6 730 aa8.71□□□□□ -1.02
LINC00472-201ENST00000413945 ARHGAP27Q6ZUM4 889 aa8.71□□□□□ -1.02
LINC00472-201ENST00000413945 RNF25Q96BH1 459 aaPredicted RBP8.71□□□□□ -1.02
LINC00472-201ENST00000413945 PRR36Q9H6K5 1346 aa8.71□□□□□ -1.02
LINC00472-201ENST00000413945 CPDO75976 1380 aa8.71□□□□□ -1.02
LINC00472-201ENST00000413945 KIF13BQ9NQT8 1826 aa8.7□□□□□ -1.02
LINC00472-201ENST00000413945 BRCA1P38398 1863 aaKnown RBP8.7□□□□□ -1.02
LINC00472-201ENST00000413945 PASKQ96RG2 1323 aa8.7□□□□□ -1.02
LINC00472-201ENST00000413945 PLEKHH1Q9ULM0 1364 aa8.7□□□□□ -1.02
LINC00472-201ENST00000413945 SBF1O95248 1867 aa8.69□□□□□ -1.02
LINC00472-201ENST00000413945 BHMG1C9JSJ3 638 aaPredicted RBP8.69□□□□□ -1.02
LINC00472-201ENST00000413945 UBTFP17480 764 aaKnown RBP8.69□□□□□ -1.02
LINC00472-201ENST00000413945 NLRP6P59044 892 aa8.69□□□□□ -1.02
LINC00472-201ENST00000413945 ZC3H6P61129 1189 aaKnown RBP8.69□□□□□ -1.02
LINC00472-201ENST00000413945 DGKZQ13574 1117 aa8.69□□□□□ -1.02
LINC00472-201ENST00000413945 TRAF7Q6Q0C0 670 aa8.69□□□□□ -1.02
LINC00472-201ENST00000413945 WAPLQ7Z5K2 1190 aa8.69□□□□□ -1.02
LINC00472-201ENST00000413945 KCNK17Q96T54 332 aa8.69□□□□□ -1.02
LINC00472-201ENST00000413945 ZC3H4Q9UPT8 1303 aaKnown RBP8.69□□□□□ -1.02
LINC00472-201ENST00000413945 USP6P35125 1406 aa8.69□□□□□ -1.02
LINC00472-201ENST00000413945 USP54Q70EL1 1684 aa8.69□□□□□ -1.02
LINC00472-201ENST00000413945 ARFGEF1Q9Y6D6 1849 aa8.68□□□□□ -1.02
LINC00472-201ENST00000413945 CASP8AP2Q9UKL3 1982 aa8.68□□□□□ -1.02
LINC00472-201ENST00000413945 RASSF10A6NK89 507 aa8.68□□□□□ -1.02
LINC00472-201ENST00000413945 POTECB2RU33 542 aa8.68□□□□□ -1.02
LINC00472-201ENST00000413945 HIRIP3Q9BW71 556 aaPredicted RBP8.68□□□□□ -1.02
LINC00472-201ENST00000413945 ACIN1Q9UKV3 1341 aaKnown RBP8.67□□□□□ -1.02
LINC00472-201ENST00000413945 N4BP2Q86UW6 1770 aaPredicted RBP8.66□□□□□ -1.02
LINC00472-201ENST00000413945 WDR33Q9C0J8 1336 aaKnown RBP8.66□□□□□ -1.02
LINC00472-201ENST00000413945 PPP4R3BQ5MIZ7 849 aa8.66□□□□□ -1.02
LINC00472-201ENST00000413945 PTCD2Q8WV60 388 aaKnown RBP8.66□□□□□ -1.02
LINC00472-201ENST00000413945 CDCA7Q9BWT1 371 aaPredicted RBP8.66□□□□□ -1.02
LINC00472-201ENST00000413945 COL25A1Q9BXS0 654 aaPredicted RBP8.66□□□□□ -1.02
LINC00472-201ENST00000413945 RNF181Q9P0P0 153 aa8.66□□□□□ -1.02
LINC00472-201ENST00000413945 BCS1LQ9Y276 419 aa8.66□□□□□ -1.02
LINC00472-201ENST00000413945 LY75O60449 1722 aa8.66□□□□□ -1.02
LINC00472-201ENST00000413945 VCANP13611 3396 aa8.65□□□□□ -1.02
LINC00472-201ENST00000413945 KDM6AO15550 1401 aaPredicted RBP8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms