RNA–Protein interactions for RNA: ENST00000412828.1

AC003087.1-201, humanhuman

TSL 3 BASIC

Gene AC003087.1, Length 499 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC003087.1-201ENST00000412828 ZCRB1Q8TBF4 217 aaKnown RBP13.16□□□□□ -0.3
AC003087.1-201ENST00000412828 SMARCC1Q92922 1105 aaPredicted RBP13.15□□□□□ -0.3
AC003087.1-201ENST00000412828 PARP3Q9Y6F1 533 aa13.15□□□□□ -0.3
AC003087.1-201ENST00000412828 TTC21BQ7Z4L5 1316 aa13.14□□□□□ -0.31
AC003087.1-201ENST00000412828 SOX10P56693 466 aa13.14□□□□□ -0.31
AC003087.1-201ENST00000412828 LDHDQ86WU2 507 aa13.14□□□□□ -0.31
AC003087.1-201ENST00000412828 TTC21AQ8NDW8 1320 aa13.13□□□□□ -0.31
AC003087.1-201ENST00000412828 LOC105371045A0A1W2PR82 267 aa13.13□□□□□ -0.31
AC003087.1-201ENST00000412828 GNPATO15228 680 aa13.13□□□□□ -0.31
AC003087.1-201ENST00000412828 ITGBL1O95965 494 aaPredicted RBP13.13□□□□□ -0.31
AC003087.1-201ENST00000412828 CABP2Q9NPB3 220 aa13.13□□□□□ -0.31
AC003087.1-201ENST00000412828 ZNF219Q9P2Y4 722 aaPredicted RBP13.13□□□□□ -0.31
AC003087.1-201ENST00000412828 C4AP0C0L4 1744 aa13.13□□□□□ -0.31
AC003087.1-201ENST00000412828 ZNF692Q9BU19 519 aaPredicted RBP13.12□□□□□ -0.31
AC003087.1-201ENST00000412828 CA12O43570 354 aa13.11□□□□□ -0.31
AC003087.1-201ENST00000412828 PIAS4Q8N2W9 510 aaPredicted RBP13.11□□□□□ -0.31
AC003087.1-201ENST00000412828 NBPF15Q8N660 670 aa13.11□□□□□ -0.31
AC003087.1-201ENST00000412828 LINC00116Q8NCU8 138 aa13.11□□□□□ -0.31
AC003087.1-201ENST00000412828 TSKSQ9UJT2 592 aa13.11□□□□□ -0.31
AC003087.1-201ENST00000412828 TIAM2Q8IVF5 1701 aa13.1□□□□□ -0.31
AC003087.1-201ENST00000412828 THSD7BQ9C0I4 1608 aa13.1□□□□□ -0.31
AC003087.1-201ENST00000412828 ECE1P42892 770 aa13.1□□□□□ -0.31
AC003087.1-201ENST00000412828 MPRIPQ6WCQ1 1025 aa13.1□□□□□ -0.31
AC003087.1-201ENST00000412828 MPHOSPH9Q99550 1183 aa13.1□□□□□ -0.31
AC003087.1-201ENST00000412828 ABT1Q9ULW3 272 aaKnown RBP13.1□□□□□ -0.31
AC003087.1-201ENST00000412828 CHRNA5P30532 468 aa13.09□□□□□ -0.31
AC003087.1-201ENST00000412828 TRAPPC3LQ5T215 181 aa13.09□□□□□ -0.31
AC003087.1-201ENST00000412828 GPR101Q96P66 508 aaPredicted RBP13.09□□□□□ -0.31
AC003087.1-201ENST00000412828 IQCA1LA6NCM1 817 aa13.08□□□□□ -0.32
AC003087.1-201ENST00000412828 STAC3Q96MF2 364 aa13.08□□□□□ -0.32
AC003087.1-201ENST00000412828 LOC102724428A0A0B4J2F2 783 aa13.07□□□□□ -0.32
AC003087.1-201ENST00000412828 GYS1P13807 737 aa13.07□□□□□ -0.32
AC003087.1-201ENST00000412828 SIK1P57059 783 aa13.07□□□□□ -0.32
AC003087.1-201ENST00000412828 CAPNS2Q96L46 248 aa13.07□□□□□ -0.32
AC003087.1-201ENST00000412828 KDM2AQ9Y2K7 1162 aa13.07□□□□□ -0.32
AC003087.1-201ENST00000412828 LTBP1Q14766 1721 aa13.06□□□□□ -0.32
AC003087.1-201ENST00000412828 MAP2K2P36507 400 aa13.06□□□□□ -0.32
AC003087.1-201ENST00000412828 RTCBQ9Y3I0 505 aaKnown RBP13.06□□□□□ -0.32
AC003087.1-201ENST00000412828 DDNO94850 711 aaPredicted RBP13.05□□□□□ -0.32
AC003087.1-201ENST00000412828 FXR1P51114 621 aaKnown RBP eCLIP13.05□□□□□ -0.32
AC003087.1-201ENST00000412828 ERFEQ4G0M1 354 aa13.05□□□□□ -0.32
AC003087.1-201ENST00000412828 FAM208AQ9UK61 1670 aaKnown RBP13.05□□□□□ -0.32
AC003087.1-201ENST00000412828 NFKBIEO00221 500 aa13.04□□□□□ -0.32
AC003087.1-201ENST00000412828 NBPF1Q3BBV0 1214 aa13.04□□□□□ -0.32
AC003087.1-201ENST00000412828 PAXIP1Q6ZW49 1069 aaPredicted RBP13.04□□□□□ -0.32
AC003087.1-201ENST00000412828 DCAF11Q8TEB1 546 aa13.04□□□□□ -0.32
AC003087.1-201ENST00000412828 ARHGEF1Q92888 912 aaKnown RBP13.04□□□□□ -0.32
AC003087.1-201ENST00000412828 TAF1DQ9H5J8 278 aaPredicted RBP13.04□□□□□ -0.32
AC003087.1-201ENST00000412828 CGNL1Q0VF96 1302 aa13.04□□□□□ -0.32
AC003087.1-201ENST00000412828 USP31Q70CQ4 1352 aa13.04□□□□□ -0.32
AC003087.1-201ENST00000412828 MEGF6O75095 1541 aa13.03□□□□□ -0.32
AC003087.1-201ENST00000412828 RFC4P35249 363 aa13.03□□□□□ -0.32
AC003087.1-201ENST00000412828 ITPK1Q13572 414 aa13.03□□□□□ -0.32
AC003087.1-201ENST00000412828 CYP4F22Q6NT55 531 aa13.03□□□□□ -0.32
AC003087.1-201ENST00000412828 IP6K1Q92551 441 aa13.03□□□□□ -0.32
AC003087.1-201ENST00000412828 LTV1Q96GA3 475 aaPredicted RBP13.03□□□□□ -0.32
AC003087.1-201ENST00000412828 LTN1O94822 1766 aa13.02□□□□□ -0.32
AC003087.1-201ENST00000412828 ATP6V1AP38606 617 aa13.02□□□□□ -0.33
AC003087.1-201ENST00000412828 GRM1Q13255 1194 aa13.02□□□□□ -0.33
AC003087.1-201ENST00000412828 CNTROBQ8N137 903 aa13.02□□□□□ -0.33
AC003087.1-201ENST00000412828 SLC17A8Q8NDX2 589 aa13.02□□□□□ -0.33
AC003087.1-201ENST00000412828 EAPPQ56P03 285 aaPredicted RBP13.01□□□□□ -0.33
AC003087.1-201ENST00000412828 PIGBQ92521 554 aa13.01□□□□□ -0.33
AC003087.1-201ENST00000412828 L3MBTL3Q96JM7 780 aaPredicted RBP13.01□□□□□ -0.33
AC003087.1-201ENST00000412828 CLEC11AQ9Y240 323 aa13.01□□□□□ -0.33
AC003087.1-201ENST00000412828 MAP2P11137 1827 aaKnown RBP13□□□□□ -0.33
AC003087.1-201ENST00000412828 PITPNM2Q9BZ72 1349 aa13□□□□□ -0.33
AC003087.1-201ENST00000412828 PCDH11XQ9BZA7 1347 aa13□□□□□ -0.33
AC003087.1-201ENST00000412828 PCDH11YQ9BZA8 1340 aa13□□□□□ -0.33
AC003087.1-201ENST00000412828 TTLL6Q8N841 843 aa13□□□□□ -0.33
AC003087.1-201ENST00000412828 BRPF1P55201 1214 aaPredicted RBP12.99□□□□□ -0.33
AC003087.1-201ENST00000412828 KTN1Q86UP2 1357 aaKnown RBP12.98□□□□□ -0.33
AC003087.1-201ENST00000412828 CENPJQ9HC77 1338 aaPredicted RBP12.98□□□□□ -0.33
AC003087.1-201ENST00000412828 AOC2O75106 756 aa12.98□□□□□ -0.33
AC003087.1-201ENST00000412828 DDX21Q9NR30 783 aaKnown RBP eCLIP12.98□□□□□ -0.33
AC003087.1-201ENST00000412828 SMG6Q86US8 1419 aaKnown RBP12.97□□□□□ -0.33
AC003087.1-201ENST00000412828 DDR1Q08345 913 aa12.97□□□□□ -0.33
AC003087.1-201ENST00000412828 MAP1SQ66K74 1059 aaPredicted RBP12.97□□□□□ -0.33
AC003087.1-201ENST00000412828 PNMA8AQ86V59 439 aaPredicted RBP12.97□□□□□ -0.33
AC003087.1-201ENST00000412828 RAPGEF4Q8WZA2 1011 aa12.97□□□□□ -0.33
AC003087.1-201ENST00000412828 CASP8AP2Q9UKL3 1982 aa12.97□□□□□ -0.33
AC003087.1-201ENST00000412828 CCDC88AQ3V6T2 1871 aa12.97□□□□□ -0.33
AC003087.1-201ENST00000412828 SCN4AP35499 1836 aa12.97□□□□□ -0.33
AC003087.1-201ENST00000412828 CD163L1Q9NR16 1453 aa12.97□□□□□ -0.33
AC003087.1-201ENST00000412828 RPS6KA4O75676 772 aa12.96□□□□□ -0.33
AC003087.1-201ENST00000412828 RC3H1Q5TC82 1133 aaKnown RBP12.96□□□□□ -0.33
AC003087.1-201ENST00000412828 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.96□□□□□ -0.33
AC003087.1-201ENST00000412828 ADAMTS7Q9UKP4 1686 aa12.96□□□□□ -0.34
AC003087.1-201ENST00000412828 ADAMTSL1Q8N6G6 1762 aa12.95□□□□□ -0.34
AC003087.1-201ENST00000412828 TATP17735 454 aaPredicted RBP12.95□□□□□ -0.34
AC003087.1-201ENST00000412828 HACL1Q9UJ83 578 aa12.95□□□□□ -0.34
AC003087.1-201ENST00000412828 TLL2Q9Y6L7 1015 aa12.95□□□□□ -0.34
AC003087.1-201ENST00000412828 MAP3K19Q56UN5 1328 aa12.94□□□□□ -0.34
AC003087.1-201ENST00000412828 POLRMTO00411 1230 aaKnown RBP12.94□□□□□ -0.34
AC003087.1-201ENST00000412828 EPHX2P34913 555 aa12.94□□□□□ -0.34
AC003087.1-201ENST00000412828 FKBP8Q14318 412 aa12.94□□□□□ -0.34
AC003087.1-201ENST00000412828 EVC2Q86UK5 1308 aa12.93□□□□□ -0.34
AC003087.1-201ENST00000412828 LTBP3Q9NS15 1303 aa12.93□□□□□ -0.34
AC003087.1-201ENST00000412828 CYP27B1O15528 508 aa12.93□□□□□ -0.34
AC003087.1-201ENST00000412828 NME9Q86XW9 330 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms