RNA–Protein interactions for RNA: ENST00000412104.6

VRK2-202, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best) BASIC

Gene VRK2, Length 1,916 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-202ENST00000412104 ZC3H6P61129 1189 aaKnown RBP30.73■■■□□ 2.51
VRK2-202ENST00000412104 NBR1Q14596 966 aa30.73■■■□□ 2.51
VRK2-202ENST00000412104 ERBB3P21860 1342 aa30.72■■■□□ 2.51
VRK2-202ENST00000412104 NPHP3Q7Z494 1330 aa30.72■■■□□ 2.51
VRK2-202ENST00000412104 DCTPP1Q9H773 170 aa30.72■■■□□ 2.51
VRK2-202ENST00000412104 OVOS2A0A0G2JMS6 1433 aa30.7■■■□□ 2.51
VRK2-202ENST00000412104 TNS3Q68CZ2 1445 aa30.7■■■□□ 2.51
VRK2-202ENST00000412104 FKBP5Q13451 457 aaPredicted RBP30.7■■■□□ 2.51
VRK2-202ENST00000412104 C1orf141Q5JVX7 400 aa30.69■■■□□ 2.5
VRK2-202ENST00000412104 EIF4A1P60842 406 aaKnown RBP30.69■■■□□ 2.5
VRK2-202ENST00000412104 TEFQ10587 303 aa30.69■■■□□ 2.5
VRK2-202ENST00000412104 HDGFL1Q5TGJ6 251 aa30.69■■■□□ 2.5
VRK2-202ENST00000412104 MPRIPQ6WCQ1 1025 aa30.69■■■□□ 2.5
VRK2-202ENST00000412104 BMP2KLQ5H9B9 411 aa30.68■■■□□ 2.5
VRK2-202ENST00000412104 COL18A1P39060 1754 aa30.68■■■□□ 2.5
VRK2-202ENST00000412104 CRYBG1Q9Y4K1 1723 aa30.68■■■□□ 2.5
VRK2-202ENST00000412104 STRCQ7RTU9 1775 aa30.67■■■□□ 2.5
VRK2-202ENST00000412104 PXDNLA1KZ92 1463 aa30.66■■■□□ 2.5
VRK2-202ENST00000412104 RNMTO43148 476 aaKnown RBP30.66■■■□□ 2.5
VRK2-202ENST00000412104 LMTK3Q96Q04 1460 aa30.66■■■□□ 2.5
VRK2-202ENST00000412104 HOXB7P09629 217 aa30.65■■■□□ 2.5
VRK2-202ENST00000412104 BTBD11A6QL63 1104 aa30.64■■■□□ 2.5
VRK2-202ENST00000412104 ADAMTS7Q9UKP4 1686 aa30.64■■■□□ 2.5
VRK2-202ENST00000412104 SIPA1L3O60292 1781 aaPredicted RBP30.63■■■□□ 2.49
VRK2-202ENST00000412104 MFAP1P55081 439 aaKnown RBP30.63■■■□□ 2.49
VRK2-202ENST00000412104 KCNQ3O43525 872 aa30.63■■■□□ 2.49
VRK2-202ENST00000412104 ABCC6O95255 1503 aa30.62■■■□□ 2.49
VRK2-202ENST00000412104 SPATA31A3Q5VYP0 1347 aa30.61■■■□□ 2.49
VRK2-202ENST00000412104 CABLES1Q8TDN4 633 aa30.6■■■□□ 2.49
VRK2-202ENST00000412104 HMMRO75330 724 aa30.59■■■□□ 2.49
VRK2-202ENST00000412104 GNAI2P04899 355 aa30.59■■■□□ 2.49
VRK2-202ENST00000412104 EIF2S2P20042 333 aaKnown RBP30.59■■■□□ 2.49
VRK2-202ENST00000412104 C22orf23Q9BZE7 217 aa30.59■■■□□ 2.49
VRK2-202ENST00000412104 PHAXQ9H814 394 aaKnown RBP30.59■■■□□ 2.49
VRK2-202ENST00000412104 NLRP2Q9NX02 1062 aa30.58■■■□□ 2.49
VRK2-202ENST00000412104 BECN1Q14457 450 aa30.57■■■□□ 2.48
VRK2-202ENST00000412104 PLEKHM2Q8IWE5 1019 aa30.57■■■□□ 2.48
VRK2-202ENST00000412104 GNAI3P08754 354 aa30.57■■■□□ 2.48
VRK2-202ENST00000412104 CHMP4AQ9BY43 222 aa30.57■■■□□ 2.48
VRK2-202ENST00000412104 KDM4FA0A1W2PPD8 638 aa30.56■■■□□ 2.48
VRK2-202ENST00000412104 RAPGEF4Q8WZA2 1011 aa30.56■■■□□ 2.48
VRK2-202ENST00000412104 BRINP3Q76B58 766 aa30.55■■■□□ 2.48
VRK2-202ENST00000412104 CHPF2Q9P2E5 772 aa30.55■■■□□ 2.48
VRK2-202ENST00000412104 MEGF6O75095 1541 aa30.54■■■□□ 2.48
VRK2-202ENST00000412104 SCN11AQ9UI33 1791 aa30.53■■■□□ 2.48
VRK2-202ENST00000412104 CPDO75976 1380 aa30.52■■■□□ 2.48
VRK2-202ENST00000412104 CHRNA2Q15822 529 aa30.52■■■□□ 2.48
VRK2-202ENST00000412104 RTL5Q5HYW3 569 aaPredicted RBP30.52■■■□□ 2.48
VRK2-202ENST00000412104 GSPT1P15170 499 aaKnown RBP30.51■■■□□ 2.48
VRK2-202ENST00000412104 C16orf71Q8IYS4 520 aaPredicted RBP30.51■■■□□ 2.48
VRK2-202ENST00000412104 HEG1Q9ULI3 1381 aa30.51■■■□□ 2.47
VRK2-202ENST00000412104 CSB-PGBD3P0DP91 1061 aa30.51■■■□□ 2.47
VRK2-202ENST00000412104 TATP17735 454 aaPredicted RBP30.51■■■□□ 2.47
VRK2-202ENST00000412104 SMARCA5O60264 1052 aaPredicted RBP30.5■■■□□ 2.47
VRK2-202ENST00000412104 APBB1O00213 710 aa30.49■■■□□ 2.47
VRK2-202ENST00000412104 KDM6AO15550 1401 aaPredicted RBP30.49■■■□□ 2.47
VRK2-202ENST00000412104 TTC22Q5TAA0 569 aa30.49■■■□□ 2.47
VRK2-202ENST00000412104 TBC1D9Q6ZT07 1266 aa30.49■■■□□ 2.47
VRK2-202ENST00000412104 USP44Q9H0E7 712 aa30.49■■■□□ 2.47
VRK2-202ENST00000412104 BCL11AQ9H165 835 aa30.49■■■□□ 2.47
VRK2-202ENST00000412104 ZNF335Q9H4Z2 1342 aaPredicted RBP30.48■■■□□ 2.47
VRK2-202ENST00000412104 GIGYF1O75420 1035 aaPredicted RBP30.48■■■□□ 2.47
VRK2-202ENST00000412104 OTUD7AQ8TE49 926 aaPredicted RBP30.48■■■□□ 2.47
VRK2-202ENST00000412104 PLEKHG2Q9H7P9 1386 aa30.48■■■□□ 2.47
VRK2-202ENST00000412104 SPG7Q9UQ90 795 aa30.47■■■□□ 2.47
VRK2-202ENST00000412104 PKD1L3Q7Z443 1732 aa30.47■■■□□ 2.47
VRK2-202ENST00000412104 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP30.47■■■□□ 2.472e-6■■■■□ 23.5
VRK2-202ENST00000412104 LRRFIP2Q9Y608 721 aaKnown RBP30.47■■■□□ 2.47
VRK2-202ENST00000412104 CDC45O75419 566 aa30.46■■■□□ 2.47
VRK2-202ENST00000412104 ATP8B2P98198 1209 aa30.46■■■□□ 2.47
VRK2-202ENST00000412104 TBC1D2Q9BYX2 928 aa30.46■■■□□ 2.47
VRK2-202ENST00000412104 SRCIN1Q9C0H9 1055 aa30.46■■■□□ 2.47
VRK2-202ENST00000412104 ANXA1P04083 346 aa30.45■■■□□ 2.47
VRK2-202ENST00000412104 PHKG2P15735 406 aa30.45■■■□□ 2.47
VRK2-202ENST00000412104 RBM25P49756 843 aaKnown RBP30.45■■■□□ 2.47
VRK2-202ENST00000412104 DBF4Q9UBU7 674 aaPredicted RBP30.45■■■□□ 2.47
VRK2-202ENST00000412104 UBTFL1P0CB47 393 aaPredicted RBP30.45■■■□□ 2.46
VRK2-202ENST00000412104 PNMA6EA0A0J9YXQ4 647 aa30.44■■■□□ 2.46
VRK2-202ENST00000412104 DNAAF4Q8WXU2 420 aa30.44■■■□□ 2.46
VRK2-202ENST00000412104 USP35Q9P2H5 1018 aa30.43■■■□□ 2.46
VRK2-202ENST00000412104 ADCY9O60503 1353 aa30.43■■■□□ 2.46
VRK2-202ENST00000412104 PI4KAP2A4QPH2 592 aa30.43■■■□□ 2.46
VRK2-202ENST00000412104 PI4KAP1Q8N8J0 262 aa30.43■■■□□ 2.46
VRK2-202ENST00000412104 EXOC6BQ9Y2D4 811 aa30.43■■■□□ 2.46
VRK2-202ENST00000412104 SLAIN2Q9P270 581 aa30.42■■■□□ 2.46
VRK2-202ENST00000412104 PRAMEF22A3QJZ6 481 aa30.41■■■□□ 2.46
VRK2-202ENST00000412104 BEND3Q5T5X7 828 aa30.41■■■□□ 2.46
VRK2-202ENST00000412104 SLC52A2Q9HAB3 445 aa30.41■■■□□ 2.46
VRK2-202ENST00000412104 SOS2Q07890 1332 aaPredicted RBP30.41■■■□□ 2.46
VRK2-202ENST00000412104 IFNL2Q8IZJ0 200 aa30.41■■■□□ 2.46
VRK2-202ENST00000412104 C5P01031 1676 aa30.4■■■□□ 2.46
VRK2-202ENST00000412104 MRC1P22897 1456 aa30.4■■■□□ 2.46
VRK2-202ENST00000412104 PROSER3Q2NL68 480 aa30.39■■■□□ 2.46
VRK2-202ENST00000412104 IBTKQ9P2D0 1353 aaPredicted RBP30.38■■■□□ 2.45
VRK2-202ENST00000412104 ABCA3Q99758 1704 aa30.38■■■□□ 2.45
VRK2-202ENST00000412104 ZNF790Q6PG37 636 aa30.38■■■□□ 2.45
VRK2-202ENST00000412104 NFKBIBQ15653 356 aa30.37■■■□□ 2.45
VRK2-202ENST00000412104 LRRCC1Q9C099 1032 aa30.36■■■□□ 2.45
VRK2-202ENST00000412104 CYP27B1O15528 508 aa30.35■■■□□ 2.45
VRK2-202ENST00000412104 SLC39A6Q13433 755 aa30.35■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms