RNA–Protein interactions for RNA: ENST00000411973.3

TRAPPC12-203, Transcript of trafficking protein particle complex 12, humanhuman

TSL 5

Gene TRAPPC12, Length 838 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-203ENST00000411973 RTF1Q92541 710 aaKnown RBP20.4■□□□□ 0.86
TRAPPC12-203ENST00000411973 SMARCC1Q92922 1105 aaPredicted RBP20.4■□□□□ 0.86
TRAPPC12-203ENST00000411973 SIPA1L3O60292 1781 aaPredicted RBP20.39■□□□□ 0.86
TRAPPC12-203ENST00000411973 TMPOP42166 694 aaKnown RBP20.39■□□□□ 0.85
TRAPPC12-203ENST00000411973 NUP188Q5SRE5 1749 aa20.39■□□□□ 0.85
TRAPPC12-203ENST00000411973 ASAP1Q9ULH1 1129 aa20.38■□□□□ 0.85
TRAPPC12-203ENST00000411973 PALLDQ8WX93 1383 aa20.37■□□□□ 0.85
TRAPPC12-203ENST00000411973 SLC27A3Q5K4L6 730 aa20.37■□□□□ 0.85
TRAPPC12-203ENST00000411973 ATG3Q9NT62 314 aa20.37■□□□□ 0.85
TRAPPC12-203ENST00000411973 RIPK4P57078 832 aa20.36■□□□□ 0.85
TRAPPC12-203ENST00000411973 TEFQ10587 303 aa20.36■□□□□ 0.85
TRAPPC12-203ENST00000411973 MCM10Q7L590 875 aa20.36■□□□□ 0.85
TRAPPC12-203ENST00000411973 PAPPAQ13219 1627 aa20.35■□□□□ 0.85
TRAPPC12-203ENST00000411973 LMOD3Q0VAK6 560 aa20.34■□□□□ 0.85
TRAPPC12-203ENST00000411973 DCTN1Q14203 1278 aa20.34■□□□□ 0.85
TRAPPC12-203ENST00000411973 MIER1Q8N108 512 aa20.34■□□□□ 0.85
TRAPPC12-203ENST00000411973 ZNF831Q5JPB2 1677 aa20.33■□□□□ 0.85
TRAPPC12-203ENST00000411973 APAF1O14727 1248 aa20.33■□□□□ 0.85
TRAPPC12-203ENST00000411973 LRRC4BQ9NT99 713 aa20.33■□□□□ 0.85
TRAPPC12-203ENST00000411973 CCNL1Q9UK58 526 aaPredicted RBP20.33■□□□□ 0.85
TRAPPC12-203ENST00000411973 HMGB2P26583 209 aaKnown RBP20.32■□□□□ 0.84
TRAPPC12-203ENST00000411973 FAM9BQ8IZU0 186 aa20.32■□□□□ 0.84
TRAPPC12-203ENST00000411973 RRP7AQ9Y3A4 280 aaKnown RBP20.32■□□□□ 0.84
TRAPPC12-203ENST00000411973 LOC102724428A0A0B4J2F2 783 aa20.31■□□□□ 0.84
TRAPPC12-203ENST00000411973 SIK1P57059 783 aa20.31■□□□□ 0.84
TRAPPC12-203ENST00000411973 TRIM35Q9UPQ4 493 aa20.31■□□□□ 0.84
TRAPPC12-203ENST00000411973 TAF1LQ8IZX4 1826 aa20.31■□□□□ 0.84
TRAPPC12-203ENST00000411973 UBR2Q8IWV8 1755 aa20.31■□□□□ 0.84
TRAPPC12-203ENST00000411973 NEUROD2Q15784 382 aa20.3■□□□□ 0.84
TRAPPC12-203ENST00000411973 NCBP3Q53F19 620 aaKnown RBP20.3■□□□□ 0.84
TRAPPC12-203ENST00000411973 C5P01031 1676 aa20.29■□□□□ 0.84
TRAPPC12-203ENST00000411973 SLC39A6Q13433 755 aa20.29■□□□□ 0.84
TRAPPC12-203ENST00000411973 TAF7Q15545 349 aaPredicted RBP20.29■□□□□ 0.84
TRAPPC12-203ENST00000411973 NBPF14Q5TI25 921 aa20.29■□□□□ 0.84
TRAPPC12-203ENST00000411973 CICQ96RK0 1608 aaPredicted RBP20.28■□□□□ 0.84
TRAPPC12-203ENST00000411973 BTBD11A6QL63 1104 aa20.28■□□□□ 0.84
TRAPPC12-203ENST00000411973 KCNQ4P56696 695 aa20.28■□□□□ 0.84
TRAPPC12-203ENST00000411973 ZNF790Q6PG37 636 aa20.28■□□□□ 0.84
TRAPPC12-203ENST00000411973 SLC4A9Q96Q91 983 aa20.28■□□□□ 0.84
TRAPPC12-203ENST00000411973 THUMPD2Q9BTF0 503 aaKnown RBP20.28■□□□□ 0.84
TRAPPC12-203ENST00000411973 KCPQ6ZWJ8 1503 aa20.27■□□□□ 0.84
TRAPPC12-203ENST00000411973 RBM42Q9BTD8 480 aaKnown RBP20.27■□□□□ 0.84
TRAPPC12-203ENST00000411973 PTCD1O75127 700 aaKnown RBP20.26■□□□□ 0.83
TRAPPC12-203ENST00000411973 ATP6V1AP38606 617 aa20.26■□□□□ 0.83
TRAPPC12-203ENST00000411973 TTC5Q8N0Z6 440 aa20.26■□□□□ 0.83
TRAPPC12-203ENST00000411973 ANO8Q9HCE9 1232 aaPredicted RBP20.26■□□□□ 0.83
TRAPPC12-203ENST00000411973 KDM3BQ7LBC6 1761 aa20.26■□□□□ 0.83
TRAPPC12-203ENST00000411973 ITPK1Q13572 414 aa20.25■□□□□ 0.83
TRAPPC12-203ENST00000411973 CCDC27Q2M243 656 aa20.25■□□□□ 0.83
TRAPPC12-203ENST00000411973 AKT1S1Q96B36 256 aa20.25■□□□□ 0.83
TRAPPC12-203ENST00000411973 COL5A3P25940 1745 aaPredicted RBP20.24■□□□□ 0.83
TRAPPC12-203ENST00000411973 SLC15A2Q16348 729 aa20.24■□□□□ 0.83
TRAPPC12-203ENST00000411973 VSIG10Q8N0Z9 540 aa20.24■□□□□ 0.83
TRAPPC12-203ENST00000411973 BABAM1Q9NWV8 329 aa20.24■□□□□ 0.83
TRAPPC12-203ENST00000411973 STK32BQ9NY57 414 aa20.24■□□□□ 0.83
TRAPPC12-203ENST00000411973 TJP1Q07157 1748 aa20.24■□□□□ 0.83
TRAPPC12-203ENST00000411973 C4BP0C0L5 1744 aa20.23■□□□□ 0.83
TRAPPC12-203ENST00000411973 NGEFQ8N5V2 710 aa20.23■□□□□ 0.83
TRAPPC12-203ENST00000411973 ZNF496Q96IT1 587 aaPredicted RBP20.23■□□□□ 0.83
TRAPPC12-203ENST00000411973 QSER1Q2KHR3 1735 aa20.22■□□□□ 0.83
TRAPPC12-203ENST00000411973 KCNQ3O43525 872 aa20.22■□□□□ 0.83
TRAPPC12-203ENST00000411973 ZNF827Q17R98 1081 aa20.22■□□□□ 0.83
TRAPPC12-203ENST00000411973 LINC00116Q8NCU8 138 aa20.22■□□□□ 0.83
TRAPPC12-203ENST00000411973 FMNL2Q96PY5 1086 aa20.22■□□□□ 0.83
TRAPPC12-203ENST00000411973 R3HDM1Q15032 1099 aaKnown RBP20.21■□□□□ 0.83
TRAPPC12-203ENST00000411973 MIS18AQ9NYP9 233 aa20.21■□□□□ 0.83
TRAPPC12-203ENST00000411973 HEG1Q9ULI3 1381 aa20.21■□□□□ 0.83
TRAPPC12-203ENST00000411973 CALD1Q05682 793 aaKnown RBP20.2■□□□□ 0.82
TRAPPC12-203ENST00000411973 MYH14Q7Z406 1995 aaKnown RBP20.19■□□□□ 0.82
TRAPPC12-203ENST00000411973 TUBGCP6Q96RT7 1819 aa20.19■□□□□ 0.82
TRAPPC12-203ENST00000411973 CHL1O00533 1208 aa20.19■□□□□ 0.82
TRAPPC12-203ENST00000411973 RC3H1Q5TC82 1133 aaKnown RBP20.19■□□□□ 0.82
TRAPPC12-203ENST00000411973 WWC1Q8IX03 1113 aa20.19■□□□□ 0.82
TRAPPC12-203ENST00000411973 UBR3Q6ZT12 1888 aa20.18■□□□□ 0.82
TRAPPC12-203ENST00000411973 PSDA5PKW4 1024 aaPredicted RBP20.18■□□□□ 0.82
TRAPPC12-203ENST00000411973 DNAJC10Q8IXB1 793 aa20.18■□□□□ 0.82
TRAPPC12-203ENST00000411973 CFAP44Q96MT7 982 aa20.18■□□□□ 0.82
TRAPPC12-203ENST00000411973 TEX13AQ9BXU3 409 aaPredicted RBP20.18■□□□□ 0.82
TRAPPC12-203ENST00000411973 TSPYL4Q9UJ04 414 aa20.18■□□□□ 0.82
TRAPPC12-203ENST00000411973 CNTNAP4Q9C0A0 1308 aa20.18■□□□□ 0.82
TRAPPC12-203ENST00000411973 ZNF853P0CG23 659 aa20.17■□□□□ 0.82
TRAPPC12-203ENST00000411973 TFCP2L1Q9NZI6 479 aa20.17■□□□□ 0.82
TRAPPC12-203ENST00000411973 SENP3-EIF4A1A0A087X0R7 540 aa20.16■□□□□ 0.82
TRAPPC12-203ENST00000411973 CYP19A1P11511 503 aaPredicted RBP20.16■□□□□ 0.82
TRAPPC12-203ENST00000411973 EIF4A1P60842 406 aaKnown RBP20.16■□□□□ 0.82
TRAPPC12-203ENST00000411973 AK7Q96M32 723 aa20.16■□□□□ 0.82
TRAPPC12-203ENST00000411973 IFT57Q9NWB7 429 aa20.16■□□□□ 0.82
TRAPPC12-203ENST00000411973 SNRPA1P09661 255 aaKnown RBP20.15■□□□□ 0.82
TRAPPC12-203ENST00000411973 CASZ1Q86V15 1759 aa20.15■□□□□ 0.82
TRAPPC12-203ENST00000411973 IL16Q14005 1332 aa20.14■□□□□ 0.81
TRAPPC12-203ENST00000411973 PNPLA7Q6ZV29 1317 aa20.14■□□□□ 0.81
TRAPPC12-203ENST00000411973 STARD3NLO95772 234 aa20.14■□□□□ 0.81
TRAPPC12-203ENST00000411973 CRKLP46109 303 aaKnown RBP20.14■□□□□ 0.81
TRAPPC12-203ENST00000411973 GNAI1P63096 354 aa20.14■□□□□ 0.81
TRAPPC12-203ENST00000411973 INTS5Q6P9B9 1019 aaKnown RBP20.13■□□□□ 0.81
TRAPPC12-203ENST00000411973 WDR63Q8IWG1 891 aa20.13■□□□□ 0.81
TRAPPC12-203ENST00000411973 FLAD1Q8NFF5 587 aa20.13■□□□□ 0.81
TRAPPC12-203ENST00000411973 LAS1LQ9Y4W2 734 aaKnown RBP20.13■□□□□ 0.81
TRAPPC12-203ENST00000411973 GNPATO15228 680 aa20.12■□□□□ 0.81
TRAPPC12-203ENST00000411973 GIGYF1O75420 1035 aaPredicted RBP20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms