RNA–Protein interactions for RNA: ENST00000411917.1

PTPA-208, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 3

Gene PTPA, Length 738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-208ENST00000411917 VIRMAQ69YN4 1812 aaKnown RBP26.26■■□□□ 1.79
PTPA-208ENST00000411917 MBIPQ9NS73 344 aa26.26■■□□□ 1.79
PTPA-208ENST00000411917 TOGARAM1Q9Y4F4 1720 aa26.25■■□□□ 1.79
PTPA-208ENST00000411917 ZNF428Q96B54 188 aa26.24■■□□□ 1.79
PTPA-208ENST00000411917 KDM3BQ7LBC6 1761 aa26.23■■□□□ 1.79
PTPA-208ENST00000411917 CABP4P57796 275 aa26.23■■□□□ 1.79
PTPA-208ENST00000411917 TSPYL4Q9UJ04 414 aa26.23■■□□□ 1.79
PTPA-208ENST00000411917 BTBD11A6QL63 1104 aa26.21■■□□□ 1.79
PTPA-208ENST00000411917 POTEAQ6S8J7 498 aa26.21■■□□□ 1.79
PTPA-208ENST00000411917 HEG1Q9ULI3 1381 aa26.2■■□□□ 1.79
PTPA-208ENST00000411917 A0A0G2JS52 829 aa26.2■■□□□ 1.78
PTPA-208ENST00000411917 MYT1Q01538 1121 aa26.2■■□□□ 1.78
PTPA-208ENST00000411917 NFATC2IPQ8NCF5 419 aa26.2■■□□□ 1.78
PTPA-208ENST00000411917 PAPPAQ13219 1627 aa26.2■■□□□ 1.78
PTPA-208ENST00000411917 HOXB7P09629 217 aa26.19■■□□□ 1.78
PTPA-208ENST00000411917 TSR2Q969E8 191 aaKnown RBP26.19■■□□□ 1.78
PTPA-208ENST00000411917 TMOD3Q9NYL9 352 aa26.19■■□□□ 1.78
PTPA-208ENST00000411917 RGS12O14924 1447 aa26.18■■□□□ 1.78
PTPA-208ENST00000411917 KRT27Q7Z3Y8 459 aa26.18■■□□□ 1.78
PTPA-208ENST00000411917 CHMP4AQ9BY43 222 aa26.18■■□□□ 1.78
PTPA-208ENST00000411917 LAS1LQ9Y4W2 734 aaKnown RBP26.18■■□□□ 1.78
PTPA-208ENST00000411917 DOT1LQ8TEK3 1739 aa26.17■■□□□ 1.78
PTPA-208ENST00000411917 ZNF790Q6PG37 636 aa26.17■■□□□ 1.78
PTPA-208ENST00000411917 EIF4A1P60842 406 aaKnown RBP26.15■■□□□ 1.78
PTPA-208ENST00000411917 FAM196AQ6ZSG2 479 aa26.15■■□□□ 1.78
PTPA-208ENST00000411917 EXOSC9Q06265 439 aaKnown RBP26.14■■□□□ 1.78
PTPA-208ENST00000411917 PIGBQ92521 554 aa26.14■■□□□ 1.78
PTPA-208ENST00000411917 NHSQ6T4R5 1651 aa26.14■■□□□ 1.78
PTPA-208ENST00000411917 ITGB4P16144 1822 aa26.14■■□□□ 1.77
PTPA-208ENST00000411917 UBR2Q8IWV8 1755 aa26.12■■□□□ 1.77
PTPA-208ENST00000411917 TTC5Q8N0Z6 440 aa26.12■■□□□ 1.77
PTPA-208ENST00000411917 PRIM1P49642 420 aaKnown RBP26.11■■□□□ 1.77
PTPA-208ENST00000411917 MIS18AQ9NYP9 233 aa26.11■■□□□ 1.77
PTPA-208ENST00000411917 BRWD3Q6RI45 1802 aa26.11■■□□□ 1.77
PTPA-208ENST00000411917 KCPQ6ZWJ8 1503 aa26.1■■□□□ 1.77
PTPA-208ENST00000411917 VAMP4O75379 141 aa26.1■■□□□ 1.77
PTPA-208ENST00000411917 TWISTNBQ3B726 338 aaPredicted RBP26.1■■□□□ 1.77
PTPA-208ENST00000411917 VSIG10Q8N0Z9 540 aa26.1■■□□□ 1.77
PTPA-208ENST00000411917 BRPF1P55201 1214 aaPredicted RBP26.09■■□□□ 1.77
PTPA-208ENST00000411917 ALDH1L2Q3SY69 923 aa26.09■■□□□ 1.77
PTPA-208ENST00000411917 FMNL2Q96PY5 1086 aa26.09■■□□□ 1.77
PTPA-208ENST00000411917 CICQ96RK0 1608 aaPredicted RBP26.08■■□□□ 1.77
PTPA-208ENST00000411917 C8orf58Q8NAV2 365 aa26.08■■□□□ 1.77
PTPA-208ENST00000411917 SMARCC1Q92922 1105 aaPredicted RBP26.08■■□□□ 1.77
PTPA-208ENST00000411917 RCAN3Q9UKA8 241 aa26.08■■□□□ 1.77
PTPA-208ENST00000411917 ATG3Q9NT62 314 aa26.07■■□□□ 1.76
PTPA-208ENST00000411917 ZNF831Q5JPB2 1677 aa26.06■■□□□ 1.76
PTPA-208ENST00000411917 GIGYF1O75420 1035 aaPredicted RBP26.06■■□□□ 1.76
PTPA-208ENST00000411917 BCL11BQ9C0K0 894 aaPredicted RBP26.06■■□□□ 1.76
PTPA-208ENST00000411917 KCNQ3O43525 872 aa26.05■■□□□ 1.76
PTPA-208ENST00000411917 TSPYL6Q8N831 410 aa26.05■■□□□ 1.76
PTPA-208ENST00000411917 SBF2Q86WG5 1849 aa26.04■■□□□ 1.76
PTPA-208ENST00000411917 SNRPA1P09661 255 aaKnown RBP26.04■■□□□ 1.76
PTPA-208ENST00000411917 RARSP54136 660 aaKnown RBP26.04■■□□□ 1.76
PTPA-208ENST00000411917 SLC39A6Q13433 755 aa26.04■■□□□ 1.76
PTPA-208ENST00000411917 ZNF496Q96IT1 587 aaPredicted RBP26.04■■□□□ 1.76
PTPA-208ENST00000411917 RNF123Q5XPI4 1314 aa26.04■■□□□ 1.76
PTPA-208ENST00000411917 TEX13AQ9BXU3 409 aaPredicted RBP26.03■■□□□ 1.76
PTPA-208ENST00000411917 SYTL4Q96C24 671 aaPredicted RBP26.02■■□□□ 1.76
PTPA-208ENST00000411917 ACSBG1Q96GR2 724 aa26.02■■□□□ 1.76
PTPA-208ENST00000411917 ASAP1Q9ULH1 1129 aa26.02■■□□□ 1.76
PTPA-208ENST00000411917 KCNQ2O43526 872 aa26.01■■□□□ 1.75
PTPA-208ENST00000411917 ERBB4Q15303 1308 aa26.01■■□□□ 1.75
PTPA-208ENST00000411917 HMGB2P26583 209 aaKnown RBP26■■□□□ 1.75
PTPA-208ENST00000411917 CCDC30Q5VVM6 783 aa26■■□□□ 1.75
PTPA-208ENST00000411917 KRT24Q2M2I5 525 aa25.99■■□□□ 1.75
PTPA-208ENST00000411917 PALLDQ8WX93 1383 aa25.98■■□□□ 1.75
PTPA-208ENST00000411917 LAMB4A4D0S4 1761 aa25.97■■□□□ 1.75
PTPA-208ENST00000411917 BTAF1O14981 1849 aa25.97■■□□□ 1.75
PTPA-208ENST00000411917 SSH1Q8WYL5 1049 aa25.96■■□□□ 1.75
PTPA-208ENST00000411917 KIF16BQ96L93 1317 aa25.95■■□□□ 1.75
PTPA-208ENST00000411917 FAM182BQ5T319 152 aa25.95■■□□□ 1.74
PTPA-208ENST00000411917 HDGFL1Q5TGJ6 251 aa25.95■■□□□ 1.74
PTPA-208ENST00000411917 ELL2O00472 640 aaPredicted RBP25.94■■□□□ 1.74
PTPA-208ENST00000411917 LOC102724428A0A0B4J2F2 783 aa25.93■■□□□ 1.74
PTPA-208ENST00000411917 SIK1P57059 783 aa25.93■■□□□ 1.74
PTPA-208ENST00000411917 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.93■■□□□ 1.74
PTPA-208ENST00000411917 ARHGAP45Q92619 1136 aa25.93■■□□□ 1.74
PTPA-208ENST00000411917 STK31Q9BXU1 1019 aa25.93■■□□□ 1.74
PTPA-208ENST00000411917 C5P01031 1676 aa25.93■■□□□ 1.74
PTPA-208ENST00000411917 PTCD1O75127 700 aaKnown RBP25.92■■□□□ 1.74
PTPA-208ENST00000411917 MRPL50Q8N5N7 158 aaKnown RBP25.92■■□□□ 1.74
PTPA-208ENST00000411917 SMC4Q9NTJ3 1288 aa25.92■■□□□ 1.74
PTPA-208ENST00000411917 DBF4Q9UBU7 674 aaPredicted RBP25.92■■□□□ 1.74
PTPA-208ENST00000411917 CACNA1FO60840 1977 aa25.92■■□□□ 1.74
PTPA-208ENST00000411917 LY75O60449 1722 aa25.91■■□□□ 1.74
PTPA-208ENST00000411917 PLSCR1O15162 318 aa25.91■■□□□ 1.74
PTPA-208ENST00000411917 STARD3NLO95772 234 aa25.91■■□□□ 1.74
PTPA-208ENST00000411917 RGPD3A6NKT7 1758 aaPredicted RBP25.91■■□□□ 1.74
PTPA-208ENST00000411917 RGPD4Q7Z3J3 1758 aa25.91■■□□□ 1.74
PTPA-208ENST00000411917 SLC4A9Q96Q91 983 aa25.9■■□□□ 1.74
PTPA-208ENST00000411917 TJP1Q07157 1748 aa25.89■■□□□ 1.74
PTPA-208ENST00000411917 IPO8O15397 1037 aaKnown RBP25.89■■□□□ 1.74
PTPA-208ENST00000411917 RRP1P56182 461 aaKnown RBP25.89■■□□□ 1.74
PTPA-208ENST00000411917 DDX21Q9NR30 783 aaKnown RBP eCLIP25.89■■□□□ 1.74
PTPA-208ENST00000411917 PTPRCP08575 1304 aa25.88■■□□□ 1.73
PTPA-208ENST00000411917 BCAR3O75815 825 aa25.88■■□□□ 1.73
PTPA-208ENST00000411917 SLC27A3Q5K4L6 730 aa25.88■■□□□ 1.73
PTPA-208ENST00000411917 PTF1AQ7RTS3 328 aa25.88■■□□□ 1.73
PTPA-208ENST00000411917 RBM42Q9BTD8 480 aaKnown RBP25.88■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms