RNA–Protein interactions for RNA: ENST00000411464.3

MRPL55-220, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-220ENST00000411464 HSP90AB1P08238 724 aaKnown RBP22.98■■□□□ 1.27
MRPL55-220ENST00000411464 MMP10P09238 476 aa22.98■■□□□ 1.27
MRPL55-220ENST00000411464 ITGB4P16144 1822 aa22.97■■□□□ 1.27
MRPL55-220ENST00000411464 PLEKHO1Q53GL0 409 aaPredicted RBP22.97■■□□□ 1.27
MRPL55-220ENST00000411464 DCAF5Q96JK2 942 aa22.97■■□□□ 1.27
MRPL55-220ENST00000411464 RBM42Q9BTD8 480 aaKnown RBP22.97■■□□□ 1.27
MRPL55-220ENST00000411464 PLEKHG2Q9H7P9 1386 aa22.97■■□□□ 1.27
MRPL55-220ENST00000411464 NLGN1Q8N2Q7 840 aa22.96■■□□□ 1.27
MRPL55-220ENST00000411464 ADCY9O60503 1353 aa22.95■■□□□ 1.26
MRPL55-220ENST00000411464 CEP350Q5VT06 3117 aa22.95■■□□□ 1.26
MRPL55-220ENST00000411464 CLSPNQ9HAW4 1339 aa22.94■■□□□ 1.26
MRPL55-220ENST00000411464 AMOTQ4VCS5 1084 aa22.94■■□□□ 1.26
MRPL55-220ENST00000411464 PCGF6Q9BYE7 350 aa22.94■■□□□ 1.26
MRPL55-220ENST00000411464 PANK3Q9H999 370 aa22.94■■□□□ 1.26
MRPL55-220ENST00000411464 ADRA2BP18089 450 aa22.93■■□□□ 1.26
MRPL55-220ENST00000411464 CABP4P57796 275 aa22.93■■□□□ 1.26
MRPL55-220ENST00000411464 EIF4G2P78344 907 aaKnown RBP eCLIP22.93■■□□□ 1.26
MRPL55-220ENST00000411464 RC3H1Q5TC82 1133 aaKnown RBP22.93■■□□□ 1.26
MRPL55-220ENST00000411464 ZNF530Q6P9A1 599 aaPredicted RBP22.93■■□□□ 1.26
MRPL55-220ENST00000411464 SLC4A9Q96Q91 983 aa22.93■■□□□ 1.26
MRPL55-220ENST00000411464 ANKRD26Q9UPS8 1709 aa22.93■■□□□ 1.26
MRPL55-220ENST00000411464 UBR3Q6ZT12 1888 aa22.92■■□□□ 1.26
MRPL55-220ENST00000411464 RFC4P35249 363 aa22.92■■□□□ 1.26
MRPL55-220ENST00000411464 TGFB2P61812 414 aa22.92■■□□□ 1.26
MRPL55-220ENST00000411464 ARHGEF1Q92888 912 aaKnown RBP22.92■■□□□ 1.26
MRPL55-220ENST00000411464 MAP2P11137 1827 aaKnown RBP22.91■■□□□ 1.26
MRPL55-220ENST00000411464 KDRP35968 1356 aa22.9■■□□□ 1.26
MRPL55-220ENST00000411464 RPS6KA4O75676 772 aa22.9■■□□□ 1.26
MRPL55-220ENST00000411464 MTHFSP49914 203 aa22.9■■□□□ 1.26
MRPL55-220ENST00000411464 CNTNAP4Q9C0A0 1308 aa22.89■■□□□ 1.26
MRPL55-220ENST00000411464 A0A0G2JLW4 131 aa22.89■■□□□ 1.25
MRPL55-220ENST00000411464 HSPA6P17066 643 aa22.89■■□□□ 1.25
MRPL55-220ENST00000411464 C1orf141Q5JVX7 400 aa22.89■■□□□ 1.25
MRPL55-220ENST00000411464 MORC1Q86VD1 984 aa22.89■■□□□ 1.25
MRPL55-220ENST00000411464 BCS1LQ9Y276 419 aa22.89■■□□□ 1.25
MRPL55-220ENST00000411464 HSPA5P11021 654 aaKnown RBP22.88■■□□□ 1.25
MRPL55-220ENST00000411464 CCDC87Q9NVE4 849 aa22.88■■□□□ 1.25
MRPL55-220ENST00000411464 PTCD1O75127 700 aaKnown RBP22.87■■□□□ 1.25
MRPL55-220ENST00000411464 PARP3Q9Y6F1 533 aa22.87■■□□□ 1.25
MRPL55-220ENST00000411464 GYS1P13807 737 aa22.86■■□□□ 1.25
MRPL55-220ENST00000411464 PXDNLA1KZ92 1463 aa22.85■■□□□ 1.25
MRPL55-220ENST00000411464 ARHGAP27Q6ZUM4 889 aa22.85■■□□□ 1.25
MRPL55-220ENST00000411464 AEBP1Q8IUX7 1158 aa22.85■■□□□ 1.25
MRPL55-220ENST00000411464 NFATC2IPQ8NCF5 419 aa22.85■■□□□ 1.25
MRPL55-220ENST00000411464 DPEP1P16444 411 aa22.84■■□□□ 1.25
MRPL55-220ENST00000411464 SULT6B1Q6IMI4 303 aa22.84■■□□□ 1.25
MRPL55-220ENST00000411464 KDM6AO15550 1401 aaPredicted RBP22.83■■□□□ 1.25
MRPL55-220ENST00000411464 KIF3CO14782 793 aa22.83■■□□□ 1.25
MRPL55-220ENST00000411464 FCHSD2O94868 740 aa22.82■■□□□ 1.24
MRPL55-220ENST00000411464 CRKLP46109 303 aaKnown RBP22.82■■□□□ 1.24
MRPL55-220ENST00000411464 IFFO2Q5TF58 517 aa22.82■■□□□ 1.24
MRPL55-220ENST00000411464 KNSTRNQ9Y448 316 aa22.82■■□□□ 1.24
MRPL55-220ENST00000411464 C10orf71Q711Q0 1435 aa22.82■■□□□ 1.24
MRPL55-220ENST00000411464 CICQ96RK0 1608 aaPredicted RBP22.81■■□□□ 1.24
MRPL55-220ENST00000411464 IL13P35225 146 aa22.78■■□□□ 1.24
MRPL55-220ENST00000411464 PIM2Q9P1W9 311 aa22.77■■□□□ 1.24
MRPL55-220ENST00000411464 SRP68Q9UHB9 627 aaKnown RBP22.77■■□□□ 1.24
MRPL55-220ENST00000411464 KCNA3P22001 575 aa22.76■■□□□ 1.23
MRPL55-220ENST00000411464 FKBP8Q14318 412 aa22.76■■□□□ 1.23
MRPL55-220ENST00000411464 ZNF831Q5JPB2 1677 aa22.76■■□□□ 1.23
MRPL55-220ENST00000411464 TOMM70O94826 608 aa22.75■■□□□ 1.23
MRPL55-220ENST00000411464 AKAP4Q5JQC9 854 aa22.75■■□□□ 1.23
MRPL55-220ENST00000411464 USP42Q9H9J4 1324 aaKnown RBP22.75■■□□□ 1.23
MRPL55-220ENST00000411464 DALRD3Q5D0E6 543 aaKnown RBP22.74■■□□□ 1.23
MRPL55-220ENST00000411464 INTS5Q6P9B9 1019 aaKnown RBP22.74■■□□□ 1.23
MRPL55-220ENST00000411464 ZPR1O75312 459 aa22.73■■□□□ 1.23
MRPL55-220ENST00000411464 APLP1P51693 650 aa22.73■■□□□ 1.23
MRPL55-220ENST00000411464 C9orf131Q5VYM1 1079 aa22.73■■□□□ 1.23
MRPL55-220ENST00000411464 C4AP0C0L4 1744 aa22.72■■□□□ 1.23
MRPL55-220ENST00000411464 DDR1Q08345 913 aa22.72■■□□□ 1.23
MRPL55-220ENST00000411464 SLC52A2Q9HAB3 445 aa22.72■■□□□ 1.23
MRPL55-220ENST00000411464 DNAJC10Q8IXB1 793 aa22.71■■□□□ 1.23
MRPL55-220ENST00000411464 LGR6Q9HBX8 967 aa22.71■■□□□ 1.23
MRPL55-220ENST00000411464 NMRK2Q9NPI5 230 aa22.71■■□□□ 1.23
MRPL55-220ENST00000411464 KIF13BQ9NQT8 1826 aa22.71■■□□□ 1.23
MRPL55-220ENST00000411464 CCER1Q8TC90 406 aaPredicted RBP22.7■■□□□ 1.22
MRPL55-220ENST00000411464 TM4SF1P30408 202 aa22.69■■□□□ 1.22
MRPL55-220ENST00000411464 AMER1Q5JTC6 1135 aaPredicted RBP22.69■■□□□ 1.22
MRPL55-220ENST00000411464 USPL1Q5W0Q7 1092 aa22.69■■□□□ 1.22
MRPL55-220ENST00000411464 C16orf71Q8IYS4 520 aaPredicted RBP22.69■■□□□ 1.22
MRPL55-220ENST00000411464 N4BP2Q86UW6 1770 aaPredicted RBP22.68■■□□□ 1.22
MRPL55-220ENST00000411464 COL5A3P25940 1745 aaPredicted RBP22.68■■□□□ 1.22
MRPL55-220ENST00000411464 POLRMTO00411 1230 aaKnown RBP22.68■■□□□ 1.22
MRPL55-220ENST00000411464 HMOX1P09601 288 aa22.68■■□□□ 1.22
MRPL55-220ENST00000411464 CHRNA5P30532 468 aa22.68■■□□□ 1.22
MRPL55-220ENST00000411464 RNMTO43148 476 aaKnown RBP22.67■■□□□ 1.22
MRPL55-220ENST00000411464 SLC39A6Q13433 755 aa22.67■■□□□ 1.22
MRPL55-220ENST00000411464 KIAA1551Q9HCM1 1747 aa22.67■■□□□ 1.22
MRPL55-220ENST00000411464 SOS1Q07889 1333 aaPredicted RBP22.66■■□□□ 1.22
MRPL55-220ENST00000411464 CYP19A1P11511 503 aaPredicted RBP22.66■■□□□ 1.22
MRPL55-220ENST00000411464 RNF181Q9P0P0 153 aa22.66■■□□□ 1.22
MRPL55-220ENST00000411464 KDM2BQ8NHM5 1336 aa22.65■■□□□ 1.22
MRPL55-220ENST00000411464 MYH14Q7Z406 1995 aaKnown RBP22.65■■□□□ 1.22
MRPL55-220ENST00000411464 RBM46Q8TBY0 533 aaKnown RBP22.64■■□□□ 1.21
MRPL55-220ENST00000411464 NARFQ9UHQ1 456 aa22.64■■□□□ 1.21
MRPL55-220ENST00000411464 DIAPH1O60610 1272 aaKnown RBP22.63■■□□□ 1.21
MRPL55-220ENST00000411464 MTHFSDQ2M296 383 aaKnown RBP22.63■■□□□ 1.21
MRPL55-220ENST00000411464 NFIXQ14938 502 aa22.62■■□□□ 1.21
MRPL55-220ENST00000411464 VSIG10Q8N0Z9 540 aa22.62■■□□□ 1.21
MRPL55-220ENST00000411464 DNAJC5GQ8N7S2 189 aa22.62■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms