RNA–Protein interactions for RNA: ENST00000409116.5

SNRNP27-202, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 5 BASIC

Gene SNRNP27, Length 1,339 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-202ENST00000409116 BTAF1O14981 1849 aa19.89■□□□□ 0.77
SNRNP27-202ENST00000409116 TEFQ10587 303 aa19.89■□□□□ 0.77
SNRNP27-202ENST00000409116 UPF1Q92900 1129 aaKnown RBP eCLIP19.88■□□□□ 0.77
SNRNP27-202ENST00000409116 APBA3O96018 575 aa19.87■□□□□ 0.77
SNRNP27-202ENST00000409116 SF3B2Q13435 895 aaKnown RBP19.85■□□□□ 0.77
SNRNP27-202ENST00000409116 ASAP1Q9ULH1 1129 aa19.85■□□□□ 0.77
SNRNP27-202ENST00000409116 SIPA1L3O60292 1781 aaPredicted RBP19.85■□□□□ 0.77
SNRNP27-202ENST00000409116 ATG3Q9NT62 314 aa19.84■□□□□ 0.77
SNRNP27-202ENST00000409116 SLC39A6Q13433 755 aa19.83■□□□□ 0.77
SNRNP27-202ENST00000409116 DEFB132Q7Z7B7 95 aa19.83■□□□□ 0.77
SNRNP27-202ENST00000409116 WWC1Q8IX03 1113 aa19.83■□□□□ 0.77
SNRNP27-202ENST00000409116 TAF7Q15545 349 aaPredicted RBP19.82■□□□□ 0.76
SNRNP27-202ENST00000409116 CCDC27Q2M243 656 aa19.82■□□□□ 0.76
SNRNP27-202ENST00000409116 CCDC125Q86Z20 511 aa19.82■□□□□ 0.76
SNRNP27-202ENST00000409116 MIS18AQ9NYP9 233 aa19.82■□□□□ 0.76
SNRNP27-202ENST00000409116 PAPPAQ13219 1627 aa19.81■□□□□ 0.76
SNRNP27-202ENST00000409116 PALLDQ8WX93 1383 aa19.81■□□□□ 0.76
SNRNP27-202ENST00000409116 BTBD11A6QL63 1104 aa19.8■□□□□ 0.76
SNRNP27-202ENST00000409116 BAG6P46379 1132 aa19.8■□□□□ 0.76
SNRNP27-202ENST00000409116 HNRNPUQ00839 825 aaKnown RBP eCLIP19.8■□□□□ 0.76
SNRNP27-202ENST00000409116 EN1Q05925 392 aaPredicted RBP19.8■□□□□ 0.76
SNRNP27-202ENST00000409116 NCBP3Q53F19 620 aaKnown RBP19.8■□□□□ 0.76
SNRNP27-202ENST00000409116 LAS1LQ9Y4W2 734 aaKnown RBP19.8■□□□□ 0.76
SNRNP27-202ENST00000409116 KCNQ3O43525 872 aa19.79■□□□□ 0.76
SNRNP27-202ENST00000409116 ADRA2BP18089 450 aa19.79■□□□□ 0.76
SNRNP27-202ENST00000409116 NGEFQ8N5V2 710 aa19.79■□□□□ 0.76
SNRNP27-202ENST00000409116 SMARCC1Q92922 1105 aaPredicted RBP19.79■□□□□ 0.76
SNRNP27-202ENST00000409116 PTCD1O75127 700 aaKnown RBP19.78■□□□□ 0.76
SNRNP27-202ENST00000409116 PLSCR1O15162 318 aa19.77■□□□□ 0.76
SNRNP27-202ENST00000409116 CALD1Q05682 793 aaKnown RBP19.77■□□□□ 0.76
SNRNP27-202ENST00000409116 EZH2Q15910 746 aaKnown RBP19.77■□□□□ 0.76
SNRNP27-202ENST00000409116 ZNF790Q6PG37 636 aa19.77■□□□□ 0.76
SNRNP27-202ENST00000409116 ZNF521Q96K83 1311 aa19.77■□□□□ 0.76
SNRNP27-202ENST00000409116 KCPQ6ZWJ8 1503 aa19.77■□□□□ 0.75
SNRNP27-202ENST00000409116 KCNQ4P56696 695 aa19.76■□□□□ 0.75
SNRNP27-202ENST00000409116 TTC5Q8N0Z6 440 aa19.76■□□□□ 0.75
SNRNP27-202ENST00000409116 CAMKK2Q96RR4 588 aa19.76■□□□□ 0.75
SNRNP27-202ENST00000409116 RBM42Q9BTD8 480 aaKnown RBP19.76■□□□□ 0.75
SNRNP27-202ENST00000409116 TSPYL4Q9UJ04 414 aa19.76■□□□□ 0.75
SNRNP27-202ENST00000409116 LY75O60449 1722 aa19.76■□□□□ 0.75
SNRNP27-202ENST00000409116 SOCS7O14512 581 aa19.76■□□□□ 0.75
SNRNP27-202ENST00000409116 TXNRD1Q16881 649 aa19.76■□□□□ 0.75
SNRNP27-202ENST00000409116 PROM2Q8N271 834 aa19.76■□□□□ 0.75
SNRNP27-202ENST00000409116 RGPD3A6NKT7 1758 aaPredicted RBP19.75■□□□□ 0.75
SNRNP27-202ENST00000409116 KDM3BQ7LBC6 1761 aa19.75■□□□□ 0.75
SNRNP27-202ENST00000409116 RGPD4Q7Z3J3 1758 aa19.75■□□□□ 0.75
SNRNP27-202ENST00000409116 UBR2Q8IWV8 1755 aa19.75■□□□□ 0.75
SNRNP27-202ENST00000409116 LOC102724428A0A0B4J2F2 783 aa19.75■□□□□ 0.75
SNRNP27-202ENST00000409116 SIK1P57059 783 aa19.75■□□□□ 0.75
SNRNP27-202ENST00000409116 WDR63Q8IWG1 891 aa19.75■□□□□ 0.75
SNRNP27-202ENST00000409116 ZNF496Q96IT1 587 aaPredicted RBP19.75■□□□□ 0.75
SNRNP27-202ENST00000409116 CFAP44Q96MT7 982 aa19.75■□□□□ 0.75
SNRNP27-202ENST00000409116 SLC4A9Q96Q91 983 aa19.75■□□□□ 0.75
SNRNP27-202ENST00000409116 IFT57Q9NWB7 429 aa19.75■□□□□ 0.75
SNRNP27-202ENST00000409116 CHL1O00533 1208 aa19.74■□□□□ 0.75
SNRNP27-202ENST00000409116 ZNF853P0CG23 659 aa19.74■□□□□ 0.75
SNRNP27-202ENST00000409116 LRRC4BQ9NT99 713 aa19.74■□□□□ 0.75
SNRNP27-202ENST00000409116 CCNL1Q9UK58 526 aaPredicted RBP19.74■□□□□ 0.75
SNRNP27-202ENST00000409116 IL16Q14005 1332 aa19.73■□□□□ 0.75
SNRNP27-202ENST00000409116 GNAI1P63096 354 aa19.73■□□□□ 0.75
SNRNP27-202ENST00000409116 SPINK5Q9NQ38 1064 aaPredicted RBP19.73■□□□□ 0.75
SNRNP27-202ENST00000409116 MBIPQ9NS73 344 aa19.73■□□□□ 0.75
SNRNP27-202ENST00000409116 TSR2Q969E8 191 aaKnown RBP19.72■□□□□ 0.75
SNRNP27-202ENST00000409116 BABAM1Q9NWV8 329 aa19.72■□□□□ 0.75
SNRNP27-202ENST00000409116 RREB1Q92766 1687 aa19.71■□□□□ 0.75
SNRNP27-202ENST00000409116 EIF4A1P60842 406 aaKnown RBP19.71■□□□□ 0.75
SNRNP27-202ENST00000409116 ITPK1Q13572 414 aa19.71■□□□□ 0.75
SNRNP27-202ENST00000409116 FMNL2Q96PY5 1086 aa19.71■□□□□ 0.75
SNRNP27-202ENST00000409116 HEG1Q9ULI3 1381 aa19.7■□□□□ 0.74
SNRNP27-202ENST00000409116 ATP6V1AP38606 617 aa19.7■□□□□ 0.74
SNRNP27-202ENST00000409116 SLC27A3Q5K4L6 730 aa19.7■□□□□ 0.74
SNRNP27-202ENST00000409116 GOLGA2Q08379 1002 aa19.69■□□□□ 0.74
SNRNP27-202ENST00000409116 KRT24Q2M2I5 525 aa19.69■□□□□ 0.74
SNRNP27-202ENST00000409116 YTHDC1Q96MU7 727 aaKnown RBP19.69■□□□□ 0.74
SNRNP27-202ENST00000409116 TJP1Q07157 1748 aa19.68■□□□□ 0.74
SNRNP27-202ENST00000409116 NUP188Q5SRE5 1749 aa19.68■□□□□ 0.74
SNRNP27-202ENST00000409116 PRAMEF22A3QJZ6 481 aa19.68■□□□□ 0.74
SNRNP27-202ENST00000409116 DNAJC10Q8IXB1 793 aa19.68■□□□□ 0.74
SNRNP27-202ENST00000409116 LINC00116Q8NCU8 138 aa19.68■□□□□ 0.74
SNRNP27-202ENST00000409116 CDCA7LQ96GN5 454 aa19.68■□□□□ 0.74
SNRNP27-202ENST00000409116 FANCIQ9NVI1 1328 aa19.68■□□□□ 0.74
SNRNP27-202ENST00000409116 ZBED9Q6R2W3 1325 aa19.67■□□□□ 0.74
SNRNP27-202ENST00000409116 ZNF831Q5JPB2 1677 aa19.67■□□□□ 0.74
SNRNP27-202ENST00000409116 C5P01031 1676 aa19.66■□□□□ 0.74
SNRNP27-202ENST00000409116 VSIG10Q8N0Z9 540 aa19.66■□□□□ 0.74
SNRNP27-202ENST00000409116 CICQ96RK0 1608 aaPredicted RBP19.65■□□□□ 0.74
SNRNP27-202ENST00000409116 TAF1LQ8IZX4 1826 aa19.65■□□□□ 0.74
SNRNP27-202ENST00000409116 MYH16Q9H6N6 1097 aa19.65■□□□□ 0.74
SNRNP27-202ENST00000409116 E9PSI1 815 aa19.64■□□□□ 0.73
SNRNP27-202ENST00000409116 GIGYF1O75420 1035 aaPredicted RBP19.64■□□□□ 0.73
SNRNP27-202ENST00000409116 SNRPA1P09661 255 aaKnown RBP19.64■□□□□ 0.73
SNRNP27-202ENST00000409116 SLFN5Q08AF3 891 aa19.64■□□□□ 0.73
SNRNP27-202ENST00000409116 ANO8Q9HCE9 1232 aaPredicted RBP19.64■□□□□ 0.73
SNRNP27-202ENST00000409116 COL5A3P25940 1745 aaPredicted RBP19.64■□□□□ 0.73
SNRNP27-202ENST00000409116 ZNF827Q17R98 1081 aa19.63■□□□□ 0.73
SNRNP27-202ENST00000409116 C8orf58Q8NAV2 365 aa19.63■□□□□ 0.73
SNRNP27-202ENST00000409116 C4BP0C0L5 1744 aa19.62■□□□□ 0.73
SNRNP27-202ENST00000409116 ELL2O00472 640 aaPredicted RBP19.62■□□□□ 0.73
SNRNP27-202ENST00000409116 CYP19A1P11511 503 aaPredicted RBP19.62■□□□□ 0.73
SNRNP27-202ENST00000409116 USP16Q9Y5T5 823 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms