RNA–Protein interactions for RNA: ENST00000409022.2

PTPN18-203, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 3

Gene PTPN18, Length 993 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-203ENST00000409022 C5P01031 1676 aa24.85■■□□□ 1.57
PTPN18-203ENST00000409022 SYT17Q9BSW7 474 aa24.85■■□□□ 1.57
PTPN18-203ENST00000409022 RBM42Q9BTD8 480 aaKnown RBP24.85■■□□□ 1.57
PTPN18-203ENST00000409022 SSFA2P28290 1259 aa24.84■■□□□ 1.57
PTPN18-203ENST00000409022 NFATC2IPQ8NCF5 419 aa24.84■■□□□ 1.57
PTPN18-203ENST00000409022 MAP3K5Q99683 1374 aa24.83■■□□□ 1.57
PTPN18-203ENST00000409022 LINC00116Q8NCU8 138 aa24.83■■□□□ 1.57
PTPN18-203ENST00000409022 GAS2L2Q8NHY3 880 aa24.82■■□□□ 1.56
PTPN18-203ENST00000409022 COL3A1P02461 1466 aaPredicted RBP24.82■■□□□ 1.56
PTPN18-203ENST00000409022 C4BP0C0L5 1744 aa24.81■■□□□ 1.56
PTPN18-203ENST00000409022 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.81■■□□□ 1.56
PTPN18-203ENST00000409022 PHF14O94880 888 aa24.81■■□□□ 1.56
PTPN18-203ENST00000409022 PPP2R1AP30153 589 aa24.81■■□□□ 1.56
PTPN18-203ENST00000409022 ITPK1Q13572 414 aa24.81■■□□□ 1.56
PTPN18-203ENST00000409022 MTHFSDQ2M296 383 aaKnown RBP24.81■■□□□ 1.56
PTPN18-203ENST00000409022 GNPATO15228 680 aa24.8■■□□□ 1.56
PTPN18-203ENST00000409022 KLHL34Q8N239 644 aa24.8■■□□□ 1.56
PTPN18-203ENST00000409022 SLC52A2Q9HAB3 445 aa24.8■■□□□ 1.56
PTPN18-203ENST00000409022 RNMTO43148 476 aaKnown RBP24.78■■□□□ 1.56
PTPN18-203ENST00000409022 RTCBQ9Y3I0 505 aaKnown RBP24.78■■□□□ 1.56
PTPN18-203ENST00000409022 PTCD1O75127 700 aaKnown RBP24.77■■□□□ 1.56
PTPN18-203ENST00000409022 RC3H1Q5TC82 1133 aaKnown RBP24.77■■□□□ 1.56
PTPN18-203ENST00000409022 MSL1Q68DK7 614 aa24.76■■□□□ 1.55
PTPN18-203ENST00000409022 TAF1LQ8IZX4 1826 aa24.76■■□□□ 1.55
PTPN18-203ENST00000409022 TUBGCP6Q96RT7 1819 aa24.76■■□□□ 1.55
PTPN18-203ENST00000409022 ADRA2BP18089 450 aa24.75■■□□□ 1.55
PTPN18-203ENST00000409022 TRAPPC3LQ5T215 181 aa24.75■■□□□ 1.55
PTPN18-203ENST00000409022 LGR6Q9HBX8 967 aa24.75■■□□□ 1.55
PTPN18-203ENST00000409022 CNTNAP4Q9C0A0 1308 aa24.75■■□□□ 1.55
PTPN18-203ENST00000409022 GNAT3A8MTJ3 354 aa24.74■■□□□ 1.55
PTPN18-203ENST00000409022 U2AF1L5P0DN76 240 aaPredicted RBP24.74■■□□□ 1.55
PTPN18-203ENST00000409022 U2AF1Q01081 240 aaKnown RBP eCLIP24.74■■□□□ 1.55
PTPN18-203ENST00000409022 SLC4A9Q96Q91 983 aa24.73■■□□□ 1.55
PTPN18-203ENST00000409022 PRKAR2BP31323 418 aa24.72■■□□□ 1.55
PTPN18-203ENST00000409022 ZNF831Q5JPB2 1677 aa24.72■■□□□ 1.55
PTPN18-203ENST00000409022 FCHSD2O94868 740 aa24.71■■□□□ 1.55
PTPN18-203ENST00000409022 NEFMP07197 916 aa24.71■■□□□ 1.55
PTPN18-203ENST00000409022 TEFQ10587 303 aa24.71■■□□□ 1.55
PTPN18-203ENST00000409022 RPS6KA4O75676 772 aa24.7■■□□□ 1.54
PTPN18-203ENST00000409022 AMIGO3Q86WK7 504 aa24.7■■□□□ 1.54
PTPN18-203ENST00000409022 TTC5Q8N0Z6 440 aa24.7■■□□□ 1.54
PTPN18-203ENST00000409022 RSPH6AQ9H0K4 717 aa24.7■■□□□ 1.54
PTPN18-203ENST00000409022 MRC1P22897 1456 aa24.7■■□□□ 1.54
PTPN18-203ENST00000409022 COL24A1Q17RW2 1714 aa24.69■■□□□ 1.54
PTPN18-203ENST00000409022 CD2APQ9Y5K6 639 aa24.69■■□□□ 1.54
PTPN18-203ENST00000409022 SCN11AQ9UI33 1791 aa24.68■■□□□ 1.54
PTPN18-203ENST00000409022 YY1P25490 414 aa24.68■■□□□ 1.54
PTPN18-203ENST00000409022 RFC4P35249 363 aa24.68■■□□□ 1.54
PTPN18-203ENST00000409022 GPR162Q16538 588 aa24.68■■□□□ 1.54
PTPN18-203ENST00000409022 CRKLP46109 303 aaKnown RBP24.67■■□□□ 1.54
PTPN18-203ENST00000409022 NLGN1Q8N2Q7 840 aa24.67■■□□□ 1.54
PTPN18-203ENST00000409022 UBR3Q6ZT12 1888 aa24.66■■□□□ 1.54
PTPN18-203ENST00000409022 RALBP1Q15311 655 aa24.66■■□□□ 1.54
PTPN18-203ENST00000409022 SMIM5Q71RC9 77 aa24.66■■□□□ 1.54
PTPN18-203ENST00000409022 VSIG10Q8N0Z9 540 aa24.66■■□□□ 1.54
PTPN18-203ENST00000409022 RTF1Q92541 710 aaKnown RBP24.66■■□□□ 1.54
PTPN18-203ENST00000409022 SLC39A6Q13433 755 aa24.65■■□□□ 1.54
PTPN18-203ENST00000409022 ARHGEF1Q92888 912 aaKnown RBP24.65■■□□□ 1.54
PTPN18-203ENST00000409022 PHACTR3Q96KR7 559 aa24.64■■□□□ 1.54
PTPN18-203ENST00000409022 PNNQ9H307 717 aaKnown RBP24.64■■□□□ 1.54
PTPN18-203ENST00000409022 ZEB1P37275 1124 aaPredicted RBP24.63■■□□□ 1.53
PTPN18-203ENST00000409022 PELP1Q8IZL8 1130 aaKnown RBP24.63■■□□□ 1.53
PTPN18-203ENST00000409022 IL17REQ8NFR9 667 aa24.63■■□□□ 1.53
PTPN18-203ENST00000409022 DDX10Q13206 875 aaKnown RBP24.62■■□□□ 1.53
PTPN18-203ENST00000409022 DNAJC10Q8IXB1 793 aa24.62■■□□□ 1.53
PTPN18-203ENST00000409022 CCDC87Q9NVE4 849 aa24.62■■□□□ 1.53
PTPN18-203ENST00000409022 NLGN2Q8NFZ4 835 aa24.61■■□□□ 1.53
PTPN18-203ENST00000409022 ADAMTS7Q9UKP4 1686 aa24.61■■□□□ 1.53
PTPN18-203ENST00000409022 HTATSF1O43719 755 aaKnown RBP24.6■■□□□ 1.53
PTPN18-203ENST00000409022 STARD3NLO95772 234 aa24.6■■□□□ 1.53
PTPN18-203ENST00000409022 MMP10P09238 476 aa24.6■■□□□ 1.53
PTPN18-203ENST00000409022 TEX13AQ9BXU3 409 aaPredicted RBP24.6■■□□□ 1.53
PTPN18-203ENST00000409022 CEMIPQ8WUJ3 1361 aa24.59■■□□□ 1.53
PTPN18-203ENST00000409022 GRIN3BO60391 1043 aa24.59■■□□□ 1.53
PTPN18-203ENST00000409022 ZNF790Q6PG37 636 aa24.59■■□□□ 1.53
PTPN18-203ENST00000409022 COL5A3P25940 1745 aaPredicted RBP24.58■■□□□ 1.53
PTPN18-203ENST00000409022 CYP19A1P11511 503 aaPredicted RBP24.58■■□□□ 1.53
PTPN18-203ENST00000409022 INTS5Q6P9B9 1019 aaKnown RBP24.58■■□□□ 1.53
PTPN18-203ENST00000409022 CICQ96RK0 1608 aaPredicted RBP24.57■■□□□ 1.52
PTPN18-203ENST00000409022 BTBD11A6QL63 1104 aa24.57■■□□□ 1.52
PTPN18-203ENST00000409022 GYS1P13807 737 aa24.57■■□□□ 1.52
PTPN18-203ENST00000409022 FMNL2Q96PY5 1086 aa24.57■■□□□ 1.52
PTPN18-203ENST00000409022 ZPR1O75312 459 aa24.56■■□□□ 1.52
PTPN18-203ENST00000409022 PARP3Q9Y6F1 533 aa24.56■■□□□ 1.52
PTPN18-203ENST00000409022 KCPQ6ZWJ8 1503 aa24.56■■□□□ 1.52
PTPN18-203ENST00000409022 USP42Q9H9J4 1324 aaKnown RBP24.55■■□□□ 1.52
PTPN18-203ENST00000409022 MAPK8IP3Q9UPT6 1336 aa24.55■■□□□ 1.52
PTPN18-203ENST00000409022 SOS1Q07889 1333 aaPredicted RBP24.54■■□□□ 1.52
PTPN18-203ENST00000409022 HEG1Q9ULI3 1381 aa24.54■■□□□ 1.52
PTPN18-203ENST00000409022 TJP1Q07157 1748 aa24.53■■□□□ 1.52
PTPN18-203ENST00000409022 NPM2Q86SE8 214 aaKnown RBP24.53■■□□□ 1.52
PTPN18-203ENST00000409022 ZNF496Q96IT1 587 aaPredicted RBP24.53■■□□□ 1.52
PTPN18-203ENST00000409022 MYBBP1AQ9BQG0 1328 aaKnown RBP24.52■■□□□ 1.52
PTPN18-203ENST00000409022 A0A087WZG4 1122 aa24.51■■□□□ 1.51
PTPN18-203ENST00000409022 MCM10Q7L590 875 aa24.51■■□□□ 1.51
PTPN18-203ENST00000409022 ZBTB1Q9Y2K1 713 aa24.51■■□□□ 1.51
PTPN18-203ENST00000409022 TGFB2P61812 414 aa24.5■■□□□ 1.51
PTPN18-203ENST00000409022 SRP68Q9UHB9 627 aaKnown RBP24.5■■□□□ 1.51
PTPN18-203ENST00000409022 COL15A1P39059 1388 aa24.5■■□□□ 1.51
PTPN18-203ENST00000409022 CANXP27824 592 aaKnown RBP24.49■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms