RNA–Protein interactions for RNA: ENST00000409001.5

SSFA2-202, Transcript of Sperm-specific antigen 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SSFA2, Length 4,987 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSFA2-202ENST00000409001 CTNNA3Q9UI47 895 aa18.59■□□□□ 0.57
SSFA2-202ENST00000409001 PDIA4P13667 645 aaKnown RBP18.59■□□□□ 0.57
SSFA2-202ENST00000409001 MEIS3Q99687 375 aa18.59■□□□□ 0.57
SSFA2-202ENST00000409001 SDSP20132 328 aa18.59■□□□□ 0.57
SSFA2-202ENST00000409001 MPRIPQ6WCQ1 1025 aa18.59■□□□□ 0.57
SSFA2-202ENST00000409001 SAMD1Q6SPF0 538 aaPredicted RBP18.58■□□□□ 0.57
SSFA2-202ENST00000409001 SCAND2PQ9GZW5 306 aaPredicted RBP18.58■□□□□ 0.57
SSFA2-202ENST00000409001 SH2B1Q9NRF2 756 aaPredicted RBP18.58■□□□□ 0.56
SSFA2-202ENST00000409001 NACAP1Q9BZK3 213 aa18.58■□□□□ 0.56
SSFA2-202ENST00000409001 CKAP2LQ8IYA6 745 aa18.58■□□□□ 0.56
SSFA2-202ENST00000409001 ARHGAP45Q92619 1136 aa18.58■□□□□ 0.56
SSFA2-202ENST00000409001 SMARCE1Q969G3 411 aa18.58■□□□□ 0.56
SSFA2-202ENST00000409001 NUP153P49790 1475 aaKnown RBP18.57■□□□□ 0.56
SSFA2-202ENST00000409001 CCDC69A6NI79 296 aa18.57■□□□□ 0.56
SSFA2-202ENST00000409001 CARD14Q9BXL6 1004 aa18.57■□□□□ 0.56
SSFA2-202ENST00000409001 TXLNAP40222 546 aa18.57■□□□□ 0.56
SSFA2-202ENST00000409001 LARP1Q6PKG0 1096 aaKnown RBP18.57■□□□□ 0.56
SSFA2-202ENST00000409001 IDH1O75874 414 aaKnown RBP18.56■□□□□ 0.56
SSFA2-202ENST00000409001 AK7Q96M32 723 aa18.56■□□□□ 0.56
SSFA2-202ENST00000409001 TCEAL9Q9UHQ7 104 aa18.56■□□□□ 0.56
SSFA2-202ENST00000409001 ANKRD36BQ8N2N9 1353 aa18.56■□□□□ 0.56
SSFA2-202ENST00000409001 TFIP11Q9UBB9 837 aaKnown RBP18.56■□□□□ 0.56
SSFA2-202ENST00000409001 MPHOSPH8Q99549 860 aa18.56■□□□□ 0.56
SSFA2-202ENST00000409001 PRDM11Q9NQV5 511 aa18.56■□□□□ 0.56
SSFA2-202ENST00000409001 PPP1R42Q7Z4L9 355 aa18.55■□□□□ 0.56
SSFA2-202ENST00000409001 ANKLE2Q86XL3 938 aa18.55■□□□□ 0.56
SSFA2-202ENST00000409001 C8orf58Q8NAV2 365 aa18.55■□□□□ 0.56
SSFA2-202ENST00000409001 PPFIBP1Q86W92 1011 aa18.55■□□□□ 0.56
SSFA2-202ENST00000409001 PTCD1O75127 700 aaKnown RBP18.55■□□□□ 0.56
SSFA2-202ENST00000409001 GUCY1B3Q02153 619 aa18.55■□□□□ 0.56
SSFA2-202ENST00000409001 MYD88Q99836 296 aa18.55■□□□□ 0.56
SSFA2-202ENST00000409001 ATP10BO94823 1461 aa18.55■□□□□ 0.56
SSFA2-202ENST00000409001 KCNH5Q8NCM2 988 aa18.55■□□□□ 0.56
SSFA2-202ENST00000409001 TMX3Q96JJ7 454 aa18.55■□□□□ 0.56
SSFA2-202ENST00000409001 C16orf71Q8IYS4 520 aaPredicted RBP18.54■□□□□ 0.56
SSFA2-202ENST00000409001 ECHDC1Q9NTX5 307 aa18.54■□□□□ 0.56
SSFA2-202ENST00000409001 STX6O43752 255 aa18.54■□□□□ 0.56
SSFA2-202ENST00000409001 ZSCAN25Q6NSZ9 544 aa18.54■□□□□ 0.56
SSFA2-202ENST00000409001 U3KPZ7 1027 aaPredicted RBP18.54■□□□□ 0.56
SSFA2-202ENST00000409001 POLR3AO14802 1390 aaPredicted RBP18.54■□□□□ 0.56
SSFA2-202ENST00000409001 PDCL2Q8N4E4 241 aa18.54■□□□□ 0.56
SSFA2-202ENST00000409001 DBF4Q9UBU7 674 aaPredicted RBP18.54■□□□□ 0.56
SSFA2-202ENST00000409001 CDKL5O76039 1030 aa18.53■□□□□ 0.56
SSFA2-202ENST00000409001 ANXA1P04083 346 aa18.53■□□□□ 0.56
SSFA2-202ENST00000409001 IMMTQ16891 758 aaKnown RBP18.53■□□□□ 0.56
SSFA2-202ENST00000409001 HSP90AB2PQ58FF8 381 aa18.53■□□□□ 0.56
SSFA2-202ENST00000409001 PI4KAP2A4QPH2 592 aa18.53■□□□□ 0.56
SSFA2-202ENST00000409001 EPS15P42566 896 aa18.53■□□□□ 0.56
SSFA2-202ENST00000409001 PI4KAP1Q8N8J0 262 aa18.53■□□□□ 0.56
SSFA2-202ENST00000409001 CCDC66A2RUB6 948 aa18.53■□□□□ 0.56
SSFA2-202ENST00000409001 MAGEC2Q9UBF1 373 aaPredicted RBP18.53■□□□□ 0.56
SSFA2-202ENST00000409001 AMOTL2Q9Y2J4 779 aa18.53■□□□□ 0.56
SSFA2-202ENST00000409001 FANCAO15360 1455 aa18.53■□□□□ 0.56
SSFA2-202ENST00000409001 ZSCAN23Q3MJ62 389 aa18.53■□□□□ 0.56
SSFA2-202ENST00000409001 PKNOX2Q96KN3 472 aa18.53■□□□□ 0.56
SSFA2-202ENST00000409001 DHX8Q14562 1220 aaKnown RBP18.52■□□□□ 0.56
SSFA2-202ENST00000409001 CFAP100Q494V2 611 aa18.52■□□□□ 0.56
SSFA2-202ENST00000409001 TDO2P48775 406 aa18.52■□□□□ 0.56
SSFA2-202ENST00000409001 PATL2C9JE40 543 aaKnown RBP18.52■□□□□ 0.56
SSFA2-202ENST00000409001 SLC3A2P08195 630 aaKnown RBP18.52■□□□□ 0.56
SSFA2-202ENST00000409001 GJB2P29033 226 aa18.52■□□□□ 0.56
SSFA2-202ENST00000409001 GNL3LQ9NVN8 582 aaKnown RBP18.52■□□□□ 0.56
SSFA2-202ENST00000409001 ANKRD44Q8N8A2 993 aa18.52■□□□□ 0.55
SSFA2-202ENST00000409001 ERCC4Q92889 916 aaPredicted RBP18.52■□□□□ 0.55
SSFA2-202ENST00000409001 DACH1Q9UI36 760 aa18.52■□□□□ 0.55
SSFA2-202ENST00000409001 TCOF1Q13428 1488 aaKnown RBP18.52■□□□□ 0.55
SSFA2-202ENST00000409001 PIP4K2AP48426 406 aaPredicted RBP18.51■□□□□ 0.55
SSFA2-202ENST00000409001 MRPL50Q8N5N7 158 aaKnown RBP18.51■□□□□ 0.55
SSFA2-202ENST00000409001 TSPYL6Q8N831 410 aa18.51■□□□□ 0.55
SSFA2-202ENST00000409001 NUP160Q12769 1436 aa18.51■□□□□ 0.55
SSFA2-202ENST00000409001 CBFA2T2O43439 604 aa18.51■□□□□ 0.55
SSFA2-202ENST00000409001 PDE1AP54750 535 aa18.51■□□□□ 0.55
SSFA2-202ENST00000409001 FOXO3O43524 673 aa18.51■□□□□ 0.55
SSFA2-202ENST00000409001 CCDC43Q96MW1 224 aaKnown RBP18.5■□□□□ 0.55
SSFA2-202ENST00000409001 UBAC1Q9BSL1 405 aa18.5■□□□□ 0.55
SSFA2-202ENST00000409001 IFIT1P09914 478 aaKnown RBP18.5■□□□□ 0.55
SSFA2-202ENST00000409001 ADCY5O95622 1261 aa18.5■□□□□ 0.55
SSFA2-202ENST00000409001 HCLS1P14317 486 aaPredicted RBP18.5■□□□□ 0.55
SSFA2-202ENST00000409001 SMC5Q8IY18 1101 aa18.5■□□□□ 0.55
SSFA2-202ENST00000409001 CDK5RAP3Q96JB5 506 aa18.5■□□□□ 0.55
SSFA2-202ENST00000409001 SFPQP23246 707 aaKnown RBP eCLIP18.49■□□□□ 0.55
SSFA2-202ENST00000409001 SNX21Q969T3 373 aa18.49■□□□□ 0.55
SSFA2-202ENST00000409001 ZBTB40Q9NUA8 1239 aa18.49■□□□□ 0.55
SSFA2-202ENST00000409001 KDM5BQ9UGL1 1544 aa18.49■□□□□ 0.55
SSFA2-202ENST00000409001 ACEP12821 1306 aa18.49■□□□□ 0.55
SSFA2-202ENST00000409001 PTPN14Q15678 1187 aa18.49■□□□□ 0.55
SSFA2-202ENST00000409001 CTDP1Q9Y5B0 961 aaPredicted RBP18.49■□□□□ 0.55
SSFA2-202ENST00000409001 TTC21BQ7Z4L5 1316 aa18.49■□□□□ 0.55
SSFA2-202ENST00000409001 SMTNL1A8MU46 457 aa18.49■□□□□ 0.55
SSFA2-202ENST00000409001 AMOTQ4VCS5 1084 aa18.49■□□□□ 0.55
SSFA2-202ENST00000409001 EVI5LQ96CN4 794 aa18.49■□□□□ 0.55
SSFA2-202ENST00000409001 ZNHIT6Q9NWK9 470 aaKnown RBP18.49■□□□□ 0.55
SSFA2-202ENST00000409001 PPFIA3O75145 1194 aa18.49■□□□□ 0.55
SSFA2-202ENST00000409001 CCT2P78371 535 aaKnown RBP18.49■□□□□ 0.55
SSFA2-202ENST00000409001 SKIDA1Q1XH10 827 aa18.49■□□□□ 0.55
SSFA2-202ENST00000409001 RHPN1Q8TCX5 695 aa18.49■□□□□ 0.55
SSFA2-202ENST00000409001 ANO10Q9NW15 660 aa18.49■□□□□ 0.55
SSFA2-202ENST00000409001 POLKQ9UBT6 870 aa18.49■□□□□ 0.55
SSFA2-202ENST00000409001 PHF8Q9UPP1 1060 aa18.49■□□□□ 0.55
SSFA2-202ENST00000409001 IKQ13123 557 aaPredicted RBP18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms