RNA–Protein interactions for RNA: ENST00000407583.7

GPN1-202, Transcript of GPN-loop GTPase 1, humanhuman

TSL 1 (best) BASIC

Gene GPN1, Length 1,395 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN1-202ENST00000407583 UBR3Q6ZT12 1888 aa12.11□□□□□ -0.47
GPN1-202ENST00000407583 POTEIP0CG38 1075 aa12.11□□□□□ -0.47
GPN1-202ENST00000407583 POTEJP0CG39 1038 aa12.11□□□□□ -0.47
GPN1-202ENST00000407583 CHADLQ6NUI6 762 aa12.11□□□□□ -0.47
GPN1-202ENST00000407583 KDM6AO15550 1401 aaPredicted RBP12.1□□□□□ -0.47
GPN1-202ENST00000407583 SBF1O95248 1867 aa12.1□□□□□ -0.47
GPN1-202ENST00000407583 SSFA2P28290 1259 aa12.09□□□□□ -0.47
GPN1-202ENST00000407583 MAP2K1Q02750 393 aaPredicted RBP12.09□□□□□ -0.47
GPN1-202ENST00000407583 PASKQ96RG2 1323 aa12.09□□□□□ -0.47
GPN1-202ENST00000407583 PALLDQ8WX93 1383 aa12.09□□□□□ -0.47
GPN1-202ENST00000407583 NSD3Q9BZ95 1437 aa12.09□□□□□ -0.47
GPN1-202ENST00000407583 DALRD3Q5D0E6 543 aaKnown RBP12.08□□□□□ -0.48
GPN1-202ENST00000407583 PIM2Q9P1W9 311 aa12.08□□□□□ -0.48
GPN1-202ENST00000407583 SOX10P56693 466 aa12.07□□□□□ -0.48
GPN1-202ENST00000407583 ANKRD24Q8TF21 1146 aa12.07□□□□□ -0.48
GPN1-202ENST00000407583 TSKSQ9UJT2 592 aa12.07□□□□□ -0.48
GPN1-202ENST00000407583 TMEM88BA6NKF7 163 aa12.06□□□□□ -0.48
GPN1-202ENST00000407583 CCDC87Q9NVE4 849 aa12.06□□□□□ -0.48
GPN1-202ENST00000407583 TIAM2Q8IVF5 1701 aa12.06□□□□□ -0.48
GPN1-202ENST00000407583 WDR33Q9C0J8 1336 aaKnown RBP12.05□□□□□ -0.48
GPN1-202ENST00000407583 SRPK2P78362 688 aaKnown RBP12.05□□□□□ -0.48
GPN1-202ENST00000407583 DDX10Q13206 875 aaKnown RBP12.05□□□□□ -0.48
GPN1-202ENST00000407583 RASSF10A6NK89 507 aa12.05□□□□□ -0.48
GPN1-202ENST00000407583 LMNB1P20700 586 aa12.05□□□□□ -0.48
GPN1-202ENST00000407583 FKBP8Q14318 412 aa12.05□□□□□ -0.48
GPN1-202ENST00000407583 CABP2Q9NPB3 220 aa12.05□□□□□ -0.48
GPN1-202ENST00000407583 CABP1Q9NZU7 370 aa12.05□□□□□ -0.48
GPN1-202ENST00000407583 DLL1O00548 723 aa12.04□□□□□ -0.48
GPN1-202ENST00000407583 HMGB2P26583 209 aaKnown RBP12.04□□□□□ -0.48
GPN1-202ENST00000407583 C4AP0C0L4 1744 aa12.04□□□□□ -0.48
GPN1-202ENST00000407583 TTC21BQ7Z4L5 1316 aa12.03□□□□□ -0.48
GPN1-202ENST00000407583 DGKZQ13574 1117 aa12.03□□□□□ -0.48
GPN1-202ENST00000407583 DEFB115Q30KQ5 88 aa12.03□□□□□ -0.48
GPN1-202ENST00000407583 LINC00116Q8NCU8 138 aa12.03□□□□□ -0.48
GPN1-202ENST00000407583 LTBP1Q14766 1721 aa12.02□□□□□ -0.48
GPN1-202ENST00000407583 THSD7BQ9C0I4 1608 aa12.02□□□□□ -0.49
GPN1-202ENST00000407583 GNPATO15228 680 aa12.02□□□□□ -0.49
GPN1-202ENST00000407583 CHRNA5P30532 468 aa12.02□□□□□ -0.49
GPN1-202ENST00000407583 HABP4Q5JVS0 413 aaKnown RBP12.02□□□□□ -0.49
GPN1-202ENST00000407583 ZNF219Q9P2Y4 722 aaPredicted RBP12.02□□□□□ -0.49
GPN1-202ENST00000407583 ZCRB1Q8TBF4 217 aaKnown RBP12.01□□□□□ -0.49
GPN1-202ENST00000407583 GCC1Q96CN9 775 aa12.01□□□□□ -0.49
GPN1-202ENST00000407583 BEGAINQ9BUH8 593 aa12.01□□□□□ -0.49
GPN1-202ENST00000407583 FANCIQ9NVI1 1328 aa12□□□□□ -0.49
GPN1-202ENST00000407583 MEGF6O75095 1541 aa12□□□□□ -0.49
GPN1-202ENST00000407583 ITGBL1O95965 494 aaPredicted RBP12□□□□□ -0.49
GPN1-202ENST00000407583 TMF1P82094 1093 aa12□□□□□ -0.49
GPN1-202ENST00000407583 DPY19L2Q6NUT2 758 aa11.99□□□□□ -0.49
GPN1-202ENST00000407583 NLGN1Q8N2Q7 840 aa11.99□□□□□ -0.49
GPN1-202ENST00000407583 SIN3AQ96ST3 1273 aa11.99□□□□□ -0.49
GPN1-202ENST00000407583 MPRIPQ6WCQ1 1025 aa11.98□□□□□ -0.49
GPN1-202ENST00000407583 PARP3Q9Y6F1 533 aa11.98□□□□□ -0.49
GPN1-202ENST00000407583 LDHDQ86WU2 507 aa11.97□□□□□ -0.49
GPN1-202ENST00000407583 MPHOSPH9Q99550 1183 aa11.97□□□□□ -0.49
GPN1-202ENST00000407583 KDM2AQ9Y2K7 1162 aa11.97□□□□□ -0.49
GPN1-202ENST00000407583 LTN1O94822 1766 aa11.97□□□□□ -0.49
GPN1-202ENST00000407583 A0A0C4DFX4 3053 aa11.97□□□□□ -0.49
GPN1-202ENST00000407583 TTC21AQ8NDW8 1320 aa11.97□□□□□ -0.49
GPN1-202ENST00000407583 FAM208AQ9UK61 1670 aaKnown RBP11.96□□□□□ -0.49
GPN1-202ENST00000407583 LTV1Q96GA3 475 aaPredicted RBP11.96□□□□□ -0.49
GPN1-202ENST00000407583 ABT1Q9ULW3 272 aaKnown RBP11.96□□□□□ -0.49
GPN1-202ENST00000407583 SZT2Q5T011 3432 aa11.95□□□□□ -0.5
GPN1-202ENST00000407583 NFKBIEO00221 500 aa11.95□□□□□ -0.5
GPN1-202ENST00000407583 GYS1P13807 737 aa11.95□□□□□ -0.5
GPN1-202ENST00000407583 FXR1P51114 621 aaKnown RBP eCLIP11.95□□□□□ -0.5
GPN1-202ENST00000407583 GRM1Q13255 1194 aa11.95□□□□□ -0.5
GPN1-202ENST00000407583 ITPK1Q13572 414 aa11.95□□□□□ -0.5
GPN1-202ENST00000407583 SMARCC1Q92922 1105 aaPredicted RBP11.95□□□□□ -0.5
GPN1-202ENST00000407583 CAPNS2Q96L46 248 aa11.95□□□□□ -0.5
GPN1-202ENST00000407583 LOC102724428A0A0B4J2F2 783 aa11.94□□□□□ -0.5
GPN1-202ENST00000407583 DDNO94850 711 aaPredicted RBP11.94□□□□□ -0.5
GPN1-202ENST00000407583 SIK1P57059 783 aa11.94□□□□□ -0.5
GPN1-202ENST00000407583 GPR101Q96P66 508 aaPredicted RBP11.94□□□□□ -0.5
GPN1-202ENST00000407583 RBM19Q9Y4C8 960 aaKnown RBP11.94□□□□□ -0.5
GPN1-202ENST00000407583 MAP2P11137 1827 aaKnown RBP11.94□□□□□ -0.5
GPN1-202ENST00000407583 CASP8AP2Q9UKL3 1982 aa11.94□□□□□ -0.5
GPN1-202ENST00000407583 CYP4F22Q6NT55 531 aa11.93□□□□□ -0.5
GPN1-202ENST00000407583 PAXIP1Q6ZW49 1069 aaPredicted RBP11.93□□□□□ -0.5
GPN1-202ENST00000407583 HOXD11P31277 338 aaPredicted RBP11.92□□□□□ -0.5
GPN1-202ENST00000407583 EIF4G2P78344 907 aaKnown RBP eCLIP11.92□□□□□ -0.5
GPN1-202ENST00000407583 TRAPPC3LQ5T215 181 aa11.92□□□□□ -0.5
GPN1-202ENST00000407583 DDR1Q08345 913 aa11.92□□□□□ -0.5
GPN1-202ENST00000407583 NBPF15Q8N660 670 aa11.92□□□□□ -0.5
GPN1-202ENST00000407583 DCAF11Q8TEB1 546 aa11.92□□□□□ -0.5
GPN1-202ENST00000407583 ARHGEF1Q92888 912 aaKnown RBP11.92□□□□□ -0.5
GPN1-202ENST00000407583 TAF1DQ9H5J8 278 aaPredicted RBP11.92□□□□□ -0.5
GPN1-202ENST00000407583 AOC2O75106 756 aa11.91□□□□□ -0.5
GPN1-202ENST00000407583 NBPF1Q3BBV0 1214 aa11.91□□□□□ -0.5
GPN1-202ENST00000407583 ERFEQ4G0M1 354 aa11.91□□□□□ -0.5
GPN1-202ENST00000407583 EAPPQ56P03 285 aaPredicted RBP11.91□□□□□ -0.5
GPN1-202ENST00000407583 PIGBQ92521 554 aa11.91□□□□□ -0.5
GPN1-202ENST00000407583 RTCBQ9Y3I0 505 aaKnown RBP11.91□□□□□ -0.5
GPN1-202ENST00000407583 CCDC88AQ3V6T2 1871 aa11.9□□□□□ -0.5
GPN1-202ENST00000407583 USP31Q70CQ4 1352 aa11.9□□□□□ -0.5
GPN1-202ENST00000407583 MKI67P46013 3256 aaKnown RBP11.9□□□□□ -0.5
GPN1-202ENST00000407583 ECE1P42892 770 aa11.9□□□□□ -0.5
GPN1-202ENST00000407583 ZNF692Q9BU19 519 aaPredicted RBP11.9□□□□□ -0.5
GPN1-202ENST00000407583 IQCA1LA6NCM1 817 aa11.89□□□□□ -0.51
GPN1-202ENST00000407583 CA12O43570 354 aa11.89□□□□□ -0.51
GPN1-202ENST00000407583 ATP6V1AP38606 617 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms