RNA–Protein interactions for RNA: ENST00000407263.2

TSPAN9-202, Transcript of tetraspanin 9, humanhuman

TSL 5 BASIC

Gene TSPAN9, Length 956 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-202ENST00000407263 CABP4P57796 275 aa13.68□□□□□ -0.22
TSPAN9-202ENST00000407263 WDR43Q15061 677 aaKnown RBP eCLIP13.68□□□□□ -0.22
TSPAN9-202ENST00000407263 KCPQ6ZWJ8 1503 aa13.68□□□□□ -0.22
TSPAN9-202ENST00000407263 LAMB4A4D0S4 1761 aa13.68□□□□□ -0.22
TSPAN9-202ENST00000407263 RNMTO43148 476 aaKnown RBP13.67□□□□□ -0.22
TSPAN9-202ENST00000407263 FCHSD2O94868 740 aa13.67□□□□□ -0.22
TSPAN9-202ENST00000407263 CCDC184Q52MB2 194 aa13.67□□□□□ -0.22
TSPAN9-202ENST00000407263 CCDC146Q8IYE0 955 aa13.67□□□□□ -0.22
TSPAN9-202ENST00000407263 LGR6Q9HBX8 967 aa13.67□□□□□ -0.22
TSPAN9-202ENST00000407263 LRRC4BQ9NT99 713 aa13.67□□□□□ -0.22
TSPAN9-202ENST00000407263 CCNL1Q9UK58 526 aaPredicted RBP13.67□□□□□ -0.22
TSPAN9-202ENST00000407263 MYH14Q7Z406 1995 aaKnown RBP13.67□□□□□ -0.22
TSPAN9-202ENST00000407263 GNAT3A8MTJ3 354 aa13.66□□□□□ -0.22
TSPAN9-202ENST00000407263 ERVV-2B6SEH9 535 aa13.66□□□□□ -0.22
TSPAN9-202ENST00000407263 NEFMP07197 916 aa13.66□□□□□ -0.22
TSPAN9-202ENST00000407263 ASAP1Q9ULH1 1129 aa13.66□□□□□ -0.22
TSPAN9-202ENST00000407263 ZNF827Q17R98 1081 aa13.65□□□□□ -0.22
TSPAN9-202ENST00000407263 NBPF14Q5TI25 921 aa13.65□□□□□ -0.22
TSPAN9-202ENST00000407263 DAXXQ9UER7 740 aaPredicted RBP13.65□□□□□ -0.22
TSPAN9-202ENST00000407263 SLC27A3Q5K4L6 730 aa13.64□□□□□ -0.23
TSPAN9-202ENST00000407263 NFATC2IPQ8NCF5 419 aa13.64□□□□□ -0.23
TSPAN9-202ENST00000407263 SMARCC1Q92922 1105 aaPredicted RBP13.64□□□□□ -0.23
TSPAN9-202ENST00000407263 PLEKHF1Q96S99 279 aa13.64□□□□□ -0.23
TSPAN9-202ENST00000407263 SLC52A2Q9HAB3 445 aa13.64□□□□□ -0.23
TSPAN9-202ENST00000407263 ATG3Q9NT62 314 aa13.64□□□□□ -0.23
TSPAN9-202ENST00000407263 STK32BQ9NY57 414 aa13.64□□□□□ -0.23
TSPAN9-202ENST00000407263 DCTN1Q14203 1278 aa13.63□□□□□ -0.23
TSPAN9-202ENST00000407263 MCM10Q7L590 875 aa13.63□□□□□ -0.23
TSPAN9-202ENST00000407263 MRS2Q9HD23 443 aa13.63□□□□□ -0.23
TSPAN9-202ENST00000407263 CEMIPQ8WUJ3 1361 aa13.62□□□□□ -0.23
TSPAN9-202ENST00000407263 LOC102724428A0A0B4J2F2 783 aa13.62□□□□□ -0.23
TSPAN9-202ENST00000407263 SIK1P57059 783 aa13.62□□□□□ -0.23
TSPAN9-202ENST00000407263 TEFQ10587 303 aa13.62□□□□□ -0.23
TSPAN9-202ENST00000407263 IL17REQ8NFR9 667 aa13.62□□□□□ -0.23
TSPAN9-202ENST00000407263 RBM42Q9BTD8 480 aaKnown RBP13.62□□□□□ -0.23
TSPAN9-202ENST00000407263 COL24A1Q17RW2 1714 aa13.61□□□□□ -0.23
TSPAN9-202ENST00000407263 SLC39A6Q13433 755 aa13.61□□□□□ -0.23
TSPAN9-202ENST00000407263 NFE2L2Q16236 605 aa13.61□□□□□ -0.23
TSPAN9-202ENST00000407263 SLC15A2Q16348 729 aa13.61□□□□□ -0.23
TSPAN9-202ENST00000407263 RTF1Q92541 710 aaKnown RBP13.61□□□□□ -0.23
TSPAN9-202ENST00000407263 PNNQ9H307 717 aaKnown RBP13.61□□□□□ -0.23
TSPAN9-202ENST00000407263 ADAMTS8Q9UP79 889 aa13.61□□□□□ -0.23
TSPAN9-202ENST00000407263 RRP7AQ9Y3A4 280 aaKnown RBP13.61□□□□□ -0.23
TSPAN9-202ENST00000407263 PTCD1O75127 700 aaKnown RBP13.6□□□□□ -0.23
TSPAN9-202ENST00000407263 ATP6V1AP38606 617 aa13.6□□□□□ -0.23
TSPAN9-202ENST00000407263 ITPK1Q13572 414 aa13.6□□□□□ -0.23
TSPAN9-202ENST00000407263 LINC00116Q8NCU8 138 aa13.6□□□□□ -0.23
TSPAN9-202ENST00000407263 PDGFDQ9GZP0 370 aaPredicted RBP13.6□□□□□ -0.23
TSPAN9-202ENST00000407263 ERICH6Q7L0X2 663 aa13.59□□□□□ -0.23
TSPAN9-202ENST00000407263 AKT1S1Q96B36 256 aa13.59□□□□□ -0.23
TSPAN9-202ENST00000407263 SLC4A9Q96Q91 983 aa13.59□□□□□ -0.23
TSPAN9-202ENST00000407263 THUMPD2Q9BTF0 503 aaKnown RBP13.59□□□□□ -0.23
TSPAN9-202ENST00000407263 SENP3-EIF4A1A0A087X0R7 540 aa13.58□□□□□ -0.24
TSPAN9-202ENST00000407263 NEUROD2Q15784 382 aa13.58□□□□□ -0.24
TSPAN9-202ENST00000407263 RUNDC1Q96C34 613 aa13.58□□□□□ -0.24
TSPAN9-202ENST00000407263 PNPLA7Q6ZV29 1317 aa13.58□□□□□ -0.24
TSPAN9-202ENST00000407263 SCN7AQ01118 1682 aa13.57□□□□□ -0.24
TSPAN9-202ENST00000407263 TTC5Q8N0Z6 440 aa13.57□□□□□ -0.24
TSPAN9-202ENST00000407263 AK7Q96M32 723 aa13.57□□□□□ -0.24
TSPAN9-202ENST00000407263 TFCP2L1Q9NZI6 479 aa13.57□□□□□ -0.24
TSPAN9-202ENST00000407263 BCORQ6W2J9 1755 aa13.57□□□□□ -0.24
TSPAN9-202ENST00000407263 PHF14O94880 888 aa13.56□□□□□ -0.24
TSPAN9-202ENST00000407263 TMPOP42166 694 aaKnown RBP13.56□□□□□ -0.24
TSPAN9-202ENST00000407263 RIPK4P57078 832 aa13.56□□□□□ -0.24
TSPAN9-202ENST00000407263 SMIM5Q71RC9 77 aa13.56□□□□□ -0.24
TSPAN9-202ENST00000407263 BTBD11A6QL63 1104 aa13.55□□□□□ -0.24
TSPAN9-202ENST00000407263 GNPATO15228 680 aa13.55□□□□□ -0.24
TSPAN9-202ENST00000407263 KCNQ3O43525 872 aa13.55□□□□□ -0.24
TSPAN9-202ENST00000407263 HTATSF1O43719 755 aaKnown RBP13.55□□□□□ -0.24
TSPAN9-202ENST00000407263 ZBTB7AO95365 584 aa13.55□□□□□ -0.24
TSPAN9-202ENST00000407263 AMIGO3Q86WK7 504 aa13.55□□□□□ -0.24
TSPAN9-202ENST00000407263 MSH5O43196 834 aa13.54□□□□□ -0.24
TSPAN9-202ENST00000407263 DNAJC10Q8IXB1 793 aa13.54□□□□□ -0.24
TSPAN9-202ENST00000407263 HEG1Q9ULI3 1381 aa13.54□□□□□ -0.24
TSPAN9-202ENST00000407263 APAF1O14727 1248 aa13.53□□□□□ -0.24
TSPAN9-202ENST00000407263 LMOD3Q0VAK6 560 aa13.53□□□□□ -0.24
TSPAN9-202ENST00000407263 ZNF790Q6PG37 636 aa13.53□□□□□ -0.24
TSPAN9-202ENST00000407263 PNISRQ8TF01 805 aaKnown RBP13.53□□□□□ -0.24
TSPAN9-202ENST00000407263 ZNF496Q96IT1 587 aaPredicted RBP13.53□□□□□ -0.24
TSPAN9-202ENST00000407263 MIS18AQ9NYP9 233 aa13.53□□□□□ -0.24
TSPAN9-202ENST00000407263 CNTNAP4Q9C0A0 1308 aa13.53□□□□□ -0.24
TSPAN9-202ENST00000407263 DIEXFQ68CQ4 756 aaKnown RBP13.52□□□□□ -0.25
TSPAN9-202ENST00000407263 FAM9BQ8IZU0 186 aa13.52□□□□□ -0.25
TSPAN9-202ENST00000407263 CRKLP46109 303 aaKnown RBP13.51□□□□□ -0.25
TSPAN9-202ENST00000407263 MSL1Q68DK7 614 aa13.51□□□□□ -0.25
TSPAN9-202ENST00000407263 COL23A1Q86Y22 540 aaPredicted RBP13.51□□□□□ -0.25
TSPAN9-202ENST00000407263 FMNL2Q96PY5 1086 aa13.51□□□□□ -0.25
TSPAN9-202ENST00000407263 ATF5Q9Y2D1 282 aaPredicted RBP13.51□□□□□ -0.25
TSPAN9-202ENST00000407263 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.5□□□□□ -0.25
TSPAN9-202ENST00000407263 TRIM35Q9UPQ4 493 aa13.5□□□□□ -0.25
TSPAN9-202ENST00000407263 AFDNP55196 1824 aaKnown RBP13.49□□□□□ -0.25
TSPAN9-202ENST00000407263 PRAMEF22A3QJZ6 481 aa13.49□□□□□ -0.25
TSPAN9-202ENST00000407263 TAF7Q15545 349 aaPredicted RBP13.49□□□□□ -0.25
TSPAN9-202ENST00000407263 SPON1Q9HCB6 807 aa13.49□□□□□ -0.25
TSPAN9-202ENST00000407263 TSPYL4Q9UJ04 414 aa13.49□□□□□ -0.25
TSPAN9-202ENST00000407263 LAS1LQ9Y4W2 734 aaKnown RBP13.49□□□□□ -0.25
TSPAN9-202ENST00000407263 COL15A1P39059 1388 aa13.48□□□□□ -0.25
TSPAN9-202ENST00000407263 CYP19A1P11511 503 aaPredicted RBP13.48□□□□□ -0.25
TSPAN9-202ENST00000407263 SSFA2P28290 1259 aa13.48□□□□□ -0.25
TSPAN9-202ENST00000407263 VSIG10Q8N0Z9 540 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms