RNA–Protein interactions for RNA: ENST00000406938.2

CHKB-201, Transcript of choline kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHKB, Length 1,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-201ENST00000406938 BABAM1Q9NWV8 329 aa26.54■■□□□ 1.84
CHKB-201ENST00000406938 KDM3BQ7LBC6 1761 aa26.53■■□□□ 1.84
CHKB-201ENST00000406938 ERVV-2B6SEH9 535 aa26.53■■□□□ 1.84
CHKB-201ENST00000406938 BTBD11A6QL63 1104 aa26.52■■□□□ 1.84
CHKB-201ENST00000406938 CABP4P57796 275 aa26.52■■□□□ 1.84
CHKB-201ENST00000406938 NFATC2IPQ8NCF5 419 aa26.52■■□□□ 1.84
CHKB-201ENST00000406938 ILDR1Q86SU0 546 aaPredicted RBP26.51■■□□□ 1.83
CHKB-201ENST00000406938 SEPT12Q8IYM1 358 aa26.51■■□□□ 1.83
CHKB-201ENST00000406938 RBM6P78332 1123 aaKnown RBP26.5■■□□□ 1.83
CHKB-201ENST00000406938 RGS17Q9UGC6 210 aaPredicted RBP26.5■■□□□ 1.83
CHKB-201ENST00000406938 DOT1LQ8TEK3 1739 aa26.5■■□□□ 1.83
CHKB-201ENST00000406938 RCAN3Q9UKA8 241 aa26.49■■□□□ 1.83
CHKB-201ENST00000406938 KRT24Q2M2I5 525 aa26.47■■□□□ 1.83
CHKB-201ENST00000406938 TSPYL6Q8N831 410 aa26.47■■□□□ 1.83
CHKB-201ENST00000406938 C8orf58Q8NAV2 365 aa26.47■■□□□ 1.83
CHKB-201ENST00000406938 KCNQ3O43525 872 aa26.46■■□□□ 1.83
CHKB-201ENST00000406938 CT47B1P0C2W7 299 aaPredicted RBP26.46■■□□□ 1.83
CHKB-201ENST00000406938 TMOD3Q9NYL9 352 aa26.46■■□□□ 1.83
CHKB-201ENST00000406938 SLC39A6Q13433 755 aa26.44■■□□□ 1.82
CHKB-201ENST00000406938 TWISTNBQ3B726 338 aaPredicted RBP26.44■■□□□ 1.82
CHKB-201ENST00000406938 PAPPAQ13219 1627 aa26.43■■□□□ 1.82
CHKB-201ENST00000406938 ELL2O00472 640 aaPredicted RBP26.43■■□□□ 1.82
CHKB-201ENST00000406938 RXRBP28702 533 aa26.43■■□□□ 1.82
CHKB-201ENST00000406938 ZNF790Q6PG37 636 aa26.43■■□□□ 1.82
CHKB-201ENST00000406938 ITGB4P16144 1822 aa26.43■■□□□ 1.82
CHKB-201ENST00000406938 EIF4A1P60842 406 aaKnown RBP26.43■■□□□ 1.82
CHKB-201ENST00000406938 POTEAQ6S8J7 498 aa26.43■■□□□ 1.82
CHKB-201ENST00000406938 BCL9O00512 1426 aa26.42■■□□□ 1.82
CHKB-201ENST00000406938 SYTL4Q96C24 671 aaPredicted RBP26.42■■□□□ 1.82
CHKB-201ENST00000406938 PRIM1P49642 420 aaKnown RBP26.41■■□□□ 1.82
CHKB-201ENST00000406938 PIGBQ92521 554 aa26.41■■□□□ 1.82
CHKB-201ENST00000406938 ACSBG1Q96GR2 724 aa26.41■■□□□ 1.82
CHKB-201ENST00000406938 SUPT16HQ9Y5B9 1047 aaKnown RBP26.41■■□□□ 1.82
CHKB-201ENST00000406938 VAMP4O75379 141 aa26.4■■□□□ 1.82
CHKB-201ENST00000406938 FAM182BQ5T319 152 aa26.4■■□□□ 1.82
CHKB-201ENST00000406938 TTC5Q8N0Z6 440 aa26.4■■□□□ 1.82
CHKB-201ENST00000406938 RARSP54136 660 aaKnown RBP26.39■■□□□ 1.82
CHKB-201ENST00000406938 BRWD3Q6RI45 1802 aa26.39■■□□□ 1.82
CHKB-201ENST00000406938 RGS12O14924 1447 aa26.39■■□□□ 1.82
CHKB-201ENST00000406938 HEG1Q9ULI3 1381 aa26.37■■□□□ 1.81
CHKB-201ENST00000406938 UBR2Q8IWV8 1755 aa26.37■■□□□ 1.81
CHKB-201ENST00000406938 KCPQ6ZWJ8 1503 aa26.36■■□□□ 1.81
CHKB-201ENST00000406938 KRT27Q7Z3Y8 459 aa26.36■■□□□ 1.81
CHKB-201ENST00000406938 ZNF428Q96B54 188 aa26.36■■□□□ 1.81
CHKB-201ENST00000406938 BCAR3O75815 825 aa26.36■■□□□ 1.81
CHKB-201ENST00000406938 ZNF496Q96IT1 587 aaPredicted RBP26.36■■□□□ 1.81
CHKB-201ENST00000406938 BCL2L13Q9BXK5 485 aa26.36■■□□□ 1.81
CHKB-201ENST00000406938 SOS1Q07889 1333 aaPredicted RBP26.35■■□□□ 1.81
CHKB-201ENST00000406938 KCNQ2O43526 872 aa26.34■■□□□ 1.81
CHKB-201ENST00000406938 SSH1Q8WYL5 1049 aa26.34■■□□□ 1.81
CHKB-201ENST00000406938 ASAP1Q9ULH1 1129 aa26.34■■□□□ 1.81
CHKB-201ENST00000406938 NHSQ6T4R5 1651 aa26.34■■□□□ 1.81
CHKB-201ENST00000406938 HOXB7P09629 217 aa26.33■■□□□ 1.81
CHKB-201ENST00000406938 FMNL2Q96PY5 1086 aa26.33■■□□□ 1.81
CHKB-201ENST00000406938 ATG3Q9NT62 314 aa26.33■■□□□ 1.81
CHKB-201ENST00000406938 RNF123Q5XPI4 1314 aa26.33■■□□□ 1.81
CHKB-201ENST00000406938 GIGYF1O75420 1035 aaPredicted RBP26.32■■□□□ 1.8
CHKB-201ENST00000406938 ALDH1L2Q3SY69 923 aa26.32■■□□□ 1.8
CHKB-201ENST00000406938 SMC4Q9NTJ3 1288 aa26.32■■□□□ 1.8
CHKB-201ENST00000406938 KAT6BQ8WYB5 2073 aa26.31■■□□□ 1.8
CHKB-201ENST00000406938 C5P01031 1676 aa26.31■■□□□ 1.8
CHKB-201ENST00000406938 RRP1P56182 461 aaKnown RBP26.31■■□□□ 1.8
CHKB-201ENST00000406938 PRAMEF22A3QJZ6 481 aa26.3■■□□□ 1.8
CHKB-201ENST00000406938 TCERG1O14776 1098 aaKnown RBP26.3■■□□□ 1.8
CHKB-201ENST00000406938 PTCD1O75127 700 aaKnown RBP26.29■■□□□ 1.8
CHKB-201ENST00000406938 HDGFL1Q5TGJ6 251 aa26.28■■□□□ 1.8
CHKB-201ENST00000406938 SBF2Q86WG5 1849 aa26.28■■□□□ 1.8
CHKB-201ENST00000406938 FAM196AQ6ZSG2 479 aa26.28■■□□□ 1.8
CHKB-201ENST00000406938 SNRPA1P09661 255 aaKnown RBP26.27■■□□□ 1.8
CHKB-201ENST00000406938 PTF1AQ7RTS3 328 aa26.27■■□□□ 1.8
CHKB-201ENST00000406938 NECTIN2Q92692 538 aa26.27■■□□□ 1.8
CHKB-201ENST00000406938 PLIN1O60240 522 aa26.26■■□□□ 1.79
CHKB-201ENST00000406938 EIF2S2P20042 333 aaKnown RBP26.26■■□□□ 1.79
CHKB-201ENST00000406938 CCDC30Q5VVM6 783 aa26.26■■□□□ 1.79
CHKB-201ENST00000406938 MRPL50Q8N5N7 158 aaKnown RBP26.25■■□□□ 1.79
CHKB-201ENST00000406938 LAMB4A4D0S4 1761 aa26.25■■□□□ 1.79
CHKB-201ENST00000406938 BTAF1O14981 1849 aa26.25■■□□□ 1.79
CHKB-201ENST00000406938 PALLDQ8WX93 1383 aa26.24■■□□□ 1.79
CHKB-201ENST00000406938 BRPF1P55201 1214 aaPredicted RBP26.24■■□□□ 1.79
CHKB-201ENST00000406938 FRAT1Q92837 279 aaPredicted RBP26.24■■□□□ 1.79
CHKB-201ENST00000406938 RBM42Q9BTD8 480 aaKnown RBP26.24■■□□□ 1.79
CHKB-201ENST00000406938 EP400Q96L91 3159 aa26.24■■□□□ 1.79
CHKB-201ENST00000406938 KIF16BQ96L93 1317 aa26.24■■□□□ 1.79
CHKB-201ENST00000406938 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.23■■□□□ 1.79
CHKB-201ENST00000406938 STK31Q9BXU1 1019 aa26.23■■□□□ 1.79
CHKB-201ENST00000406938 CHMP4AQ9BY43 222 aa26.22■■□□□ 1.79
CHKB-201ENST00000406938 CANXP27824 592 aaKnown RBP26.21■■□□□ 1.79
CHKB-201ENST00000406938 VSIG10Q8N0Z9 540 aa26.21■■□□□ 1.79
CHKB-201ENST00000406938 SMARCC1Q92922 1105 aaPredicted RBP26.21■■□□□ 1.79
CHKB-201ENST00000406938 BCL11BQ9C0K0 894 aaPredicted RBP26.21■■□□□ 1.79
CHKB-201ENST00000406938 USP16Q9Y5T5 823 aa26.21■■□□□ 1.79
CHKB-201ENST00000406938 SLC4A2P04920 1241 aa26.2■■□□□ 1.78
CHKB-201ENST00000406938 SLC4A9Q96Q91 983 aa26.2■■□□□ 1.78
CHKB-201ENST00000406938 CHPF2Q9P2E5 772 aa26.2■■□□□ 1.78
CHKB-201ENST00000406938 NOB1Q9ULX3 412 aaKnown RBP26.2■■□□□ 1.78
CHKB-201ENST00000406938 IRX6P78412 446 aaPredicted RBP26.19■■□□□ 1.78
CHKB-201ENST00000406938 NEFLP07196 543 aa26.18■■□□□ 1.78
CHKB-201ENST00000406938 TJP1Q07157 1748 aa26.18■■□□□ 1.78
CHKB-201ENST00000406938 LOC102724428A0A0B4J2F2 783 aa26.17■■□□□ 1.78
CHKB-201ENST00000406938 TRIM37O94972 964 aa26.17■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms