RNA–Protein interactions for RNA: ENST00000405655.7

PRAME-205, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PRAME, Length 2,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-205ENST00000405655 FLIIQ13045 1269 aa17.75■□□□□ 0.43
PRAME-205ENST00000405655 FKBP5Q13451 457 aaPredicted RBP17.75■□□□□ 0.43
PRAME-205ENST00000405655 HDGFL1Q5TGJ6 251 aa17.75■□□□□ 0.43
PRAME-205ENST00000405655 SMC5Q8IY18 1101 aa17.75■□□□□ 0.43
PRAME-205ENST00000405655 PRDM11Q9NQV5 511 aa17.75■□□□□ 0.43
PRAME-205ENST00000405655 KDM3BQ7LBC6 1761 aa17.75■□□□□ 0.43
PRAME-205ENST00000405655 ANP32AP39687 249 aaKnown RBP17.74■□□□□ 0.43
PRAME-205ENST00000405655 RAPGEF4Q8WZA2 1011 aa17.74■□□□□ 0.43
PRAME-205ENST00000405655 STK31Q9BXU1 1019 aa17.74■□□□□ 0.43
PRAME-205ENST00000405655 APBB1O00213 710 aa17.74■□□□□ 0.43
PRAME-205ENST00000405655 CHPF2Q9P2E5 772 aa17.74■□□□□ 0.43
PRAME-205ENST00000405655 PROSER3Q2NL68 480 aa17.73■□□□□ 0.43
PRAME-205ENST00000405655 AMOTQ4VCS5 1084 aa17.73■□□□□ 0.43
PRAME-205ENST00000405655 ANKRD45Q5TZF3 282 aa17.73■□□□□ 0.43
PRAME-205ENST00000405655 STRN4Q9NRL3 753 aa17.73■□□□□ 0.43
PRAME-205ENST00000405655 SLC4A3P48751 1232 aa17.73■□□□□ 0.43
PRAME-205ENST00000405655 CCDC30Q5VVM6 783 aa17.73■□□□□ 0.43
PRAME-205ENST00000405655 CYP27B1O15528 508 aa17.72■□□□□ 0.43
PRAME-205ENST00000405655 NFATC2IPQ8NCF5 419 aa17.72■□□□□ 0.43
PRAME-205ENST00000405655 USP35Q9P2H5 1018 aa17.72■□□□□ 0.43
PRAME-205ENST00000405655 PTPRCP08575 1304 aa17.72■□□□□ 0.43
PRAME-205ENST00000405655 KDM6AO15550 1401 aaPredicted RBP17.72■□□□□ 0.43
PRAME-205ENST00000405655 TATP17735 454 aaPredicted RBP17.71■□□□□ 0.43
PRAME-205ENST00000405655 PIP4K2AP48426 406 aaPredicted RBP17.71■□□□□ 0.43
PRAME-205ENST00000405655 IPO9Q96P70 1041 aaKnown RBP17.71■□□□□ 0.43
PRAME-205ENST00000405655 NUCB1Q02818 461 aa17.7■□□□□ 0.42
PRAME-205ENST00000405655 C16orf71Q8IYS4 520 aaPredicted RBP17.7■□□□□ 0.42
PRAME-205ENST00000405655 PHKG2P15735 406 aa17.7■□□□□ 0.42
PRAME-205ENST00000405655 TOM1L2Q6ZVM7 507 aa17.7■□□□□ 0.42
PRAME-205ENST00000405655 SMARCA5O60264 1052 aaPredicted RBP17.69■□□□□ 0.42
PRAME-205ENST00000405655 LARP1Q6PKG0 1096 aaKnown RBP17.69■□□□□ 0.42
PRAME-205ENST00000405655 CHD1LQ86WJ1 897 aa17.69■□□□□ 0.42
PRAME-205ENST00000405655 ATP10DQ9P241 1426 aa17.69■□□□□ 0.42
PRAME-205ENST00000405655 SIPA1L3O60292 1781 aaPredicted RBP17.69■□□□□ 0.42
PRAME-205ENST00000405655 CEP85Q6P2H3 762 aa17.69■□□□□ 0.42
PRAME-205ENST00000405655 ABCA3Q99758 1704 aa17.68■□□□□ 0.42
PRAME-205ENST00000405655 OTUD7AQ8TE49 926 aaPredicted RBP17.68■□□□□ 0.42
PRAME-205ENST00000405655 SCN11AQ9UI33 1791 aa17.67■□□□□ 0.42
PRAME-205ENST00000405655 CPDO75976 1380 aa17.67■□□□□ 0.42
PRAME-205ENST00000405655 GIGYF1O75420 1035 aaPredicted RBP17.66■□□□□ 0.42
PRAME-205ENST00000405655 CACNA1FO60840 1977 aa17.66■□□□□ 0.42
PRAME-205ENST00000405655 BABAM1Q9NWV8 329 aa17.65■□□□□ 0.42
PRAME-205ENST00000405655 NOP58Q9Y2X3 529 aaKnown RBP17.65■□□□□ 0.42
PRAME-205ENST00000405655 ANKRD44Q8N8A2 993 aa17.64■□□□□ 0.42
PRAME-205ENST00000405655 SPG7Q9UQ90 795 aa17.64■□□□□ 0.42
PRAME-205ENST00000405655 PI4KAP2A4QPH2 592 aa17.64■□□□□ 0.41
PRAME-205ENST00000405655 C5P01031 1676 aa17.64■□□□□ 0.41
PRAME-205ENST00000405655 COL5A2P05997 1499 aaPredicted RBP17.64■□□□□ 0.41
PRAME-205ENST00000405655 NHSL1Q5SYE7 1610 aa17.64■□□□□ 0.41
PRAME-205ENST00000405655 PI4KAP1Q8N8J0 262 aa17.64■□□□□ 0.41
PRAME-205ENST00000405655 DDX54Q8TDD1 881 aaKnown RBP17.64■□□□□ 0.41
PRAME-205ENST00000405655 SLC52A2Q9HAB3 445 aa17.64■□□□□ 0.41
PRAME-205ENST00000405655 KAT6BQ8WYB5 2073 aa17.64■□□□□ 0.41
PRAME-205ENST00000405655 WDR17Q8IZU2 1322 aa17.63■□□□□ 0.41
PRAME-205ENST00000405655 AIMP1Q12904 312 aaKnown RBP17.63■□□□□ 0.41
PRAME-205ENST00000405655 IFNL2Q8IZJ0 200 aa17.63■□□□□ 0.41
PRAME-205ENST00000405655 PNMA6EA0A0J9YXQ4 647 aa17.63■□□□□ 0.41
PRAME-205ENST00000405655 ZNF790Q6PG37 636 aa17.63■□□□□ 0.41
PRAME-205ENST00000405655 ZNF496Q96IT1 587 aaPredicted RBP17.63■□□□□ 0.41
PRAME-205ENST00000405655 LRRFIP2Q9Y608 721 aaKnown RBP17.63■□□□□ 0.41
PRAME-205ENST00000405655 CCT4P50991 539 aaKnown RBP17.62■□□□□ 0.41
PRAME-205ENST00000405655 USP44Q9H0E7 712 aa17.62■□□□□ 0.41
PRAME-205ENST00000405655 ADAMTS7Q9UKP4 1686 aa17.62■□□□□ 0.41
PRAME-205ENST00000405655 ROBO1Q9Y6N7 1651 aa17.62■□□□□ 0.41
PRAME-205ENST00000405655 MYL6BP14649 208 aa17.62■□□□□ 0.41
PRAME-205ENST00000405655 EVA1CP58658 441 aa17.62■□□□□ 0.41
PRAME-205ENST00000405655 DCTPP1Q9H773 170 aa17.62■□□□□ 0.41
PRAME-205ENST00000405655 ZBTB47Q9UFB7 747 aaPredicted RBP17.62■□□□□ 0.41
PRAME-205ENST00000405655 BTG4Q9NY30 223 aa17.61■□□□□ 0.41
PRAME-205ENST00000405655 EXOC6BQ9Y2D4 811 aa17.61■□□□□ 0.41
PRAME-205ENST00000405655 NBPF7P0C2Y1 421 aaPredicted RBP17.6■□□□□ 0.41
PRAME-205ENST00000405655 ERICH6Q7L0X2 663 aa17.6■□□□□ 0.41
PRAME-205ENST00000405655 GCC1Q96CN9 775 aa17.6■□□□□ 0.41
PRAME-205ENST00000405655 USP16Q9Y5T5 823 aa17.6■□□□□ 0.41
PRAME-205ENST00000405655 ADCY9O60503 1353 aa17.6■□□□□ 0.41
PRAME-205ENST00000405655 CHMP4BQ9H444 224 aaKnown RBP17.6■□□□□ 0.41
PRAME-205ENST00000405655 PKD1L3Q7Z443 1732 aa17.6■□□□□ 0.41
PRAME-205ENST00000405655 HEG1Q9ULI3 1381 aa17.6■□□□□ 0.41
PRAME-205ENST00000405655 PDIA6Q15084 440 aa17.59■□□□□ 0.41
PRAME-205ENST00000405655 CWF19L2Q2TBE0 894 aaKnown RBP17.59■□□□□ 0.41
PRAME-205ENST00000405655 TSHZ3Q63HK5 1081 aa17.59■□□□□ 0.41
PRAME-205ENST00000405655 OVOS2A0A0G2JMS6 1433 aa17.58■□□□□ 0.41
PRAME-205ENST00000405655 MFAP1P55081 439 aaKnown RBP17.58■□□□□ 0.4
PRAME-205ENST00000405655 PIP4K2BP78356 416 aa17.58■□□□□ 0.4
PRAME-205ENST00000405655 ZCRB1Q8TBF4 217 aaKnown RBP17.58■□□□□ 0.4
PRAME-205ENST00000405655 MAP3K2Q9Y2U5 619 aa17.58■□□□□ 0.4
PRAME-205ENST00000405655 ABCC6O95255 1503 aa17.58■□□□□ 0.4
PRAME-205ENST00000405655 GNAI2P04899 355 aa17.57■□□□□ 0.4
PRAME-205ENST00000405655 CABP4P57796 275 aa17.57■□□□□ 0.4
PRAME-205ENST00000405655 DNAAF4Q8WXU2 420 aa17.57■□□□□ 0.4
PRAME-205ENST00000405655 ANP32EQ9BTT0 268 aa17.57■□□□□ 0.4
PRAME-205ENST00000405655 BEND3Q5T5X7 828 aa17.57■□□□□ 0.4
PRAME-205ENST00000405655 RPAP2Q8IXW5 612 aaPredicted RBP17.57■□□□□ 0.4
PRAME-205ENST00000405655 JARID2Q92833 1246 aaPredicted RBP17.57■□□□□ 0.4
PRAME-205ENST00000405655 DCAF5Q96JK2 942 aa17.57■□□□□ 0.4
PRAME-205ENST00000405655 ADAMTS2O95450 1211 aa17.56■□□□□ 0.4
PRAME-205ENST00000405655 PLEKHM2Q8IWE5 1019 aa17.56■□□□□ 0.4
PRAME-205ENST00000405655 DBF4Q9UBU7 674 aaPredicted RBP17.56■□□□□ 0.4
PRAME-205ENST00000405655 GSPT1P15170 499 aaKnown RBP17.56■□□□□ 0.4
PRAME-205ENST00000405655 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms