RNA–Protein interactions for RNA: ENST00000400908.6

RERE-204, Transcript of arginine-glutamic acid dipeptide repeats, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RERE, Length 5,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RERE-204ENST00000400908 POLR3GO15318 223 aaPredicted RBP16.17■□□□□ 0.18
RERE-204ENST00000400908 CCDC178Q5BJE1 867 aa16.17■□□□□ 0.18
RERE-204ENST00000400908 SPECC1Q5M775 1068 aa16.17■□□□□ 0.18
RERE-204ENST00000400908 ZWINTO95229 277 aa16.17■□□□□ 0.18
RERE-204ENST00000400908 NUTM2GQ5VZR2 741 aa16.17■□□□□ 0.18
RERE-204ENST00000400908 DNAAF4Q8WXU2 420 aa16.17■□□□□ 0.18
RERE-204ENST00000400908 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.16■□□□□ 0.183e-6■□□□□ 9.3
RERE-204ENST00000400908 COMMD10Q9Y6G5 202 aa16.16■□□□□ 0.18
RERE-204ENST00000400908 V9GYY5 206 aaPredicted RBP16.16■□□□□ 0.18
RERE-204ENST00000400908 PPP1R12BO60237 982 aaPredicted RBP16.16■□□□□ 0.18
RERE-204ENST00000400908 CFAP100Q494V2 611 aa16.16■□□□□ 0.18
RERE-204ENST00000400908 KLHL34Q8N239 644 aa16.16■□□□□ 0.18
RERE-204ENST00000400908 KIF18AQ8NI77 898 aa16.16■□□□□ 0.18
RERE-204ENST00000400908 NUP153P49790 1475 aaKnown RBP16.16■□□□□ 0.18
RERE-204ENST00000400908 RPRD2Q5VT52 1461 aaKnown RBP16.16■□□□□ 0.18
RERE-204ENST00000400908 CCDC69A6NI79 296 aa16.15■□□□□ 0.18
RERE-204ENST00000400908 GTF2A1P52655 376 aaPredicted RBP16.15■□□□□ 0.18
RERE-204ENST00000400908 LARP1Q6PKG0 1096 aaKnown RBP16.15■□□□□ 0.18
RERE-204ENST00000400908 PANK1Q8TE04 598 aa16.15■□□□□ 0.18
RERE-204ENST00000400908 SPATA32Q96LK8 384 aa16.15■□□□□ 0.18
RERE-204ENST00000400908 HOMER2Q9NSB8 354 aa16.15■□□□□ 0.18
RERE-204ENST00000400908 ADAMTS12P58397 1594 aa16.15■□□□□ 0.18
RERE-204ENST00000400908 ZSCAN30Q86W11 494 aa16.15■□□□□ 0.18
RERE-204ENST00000400908 KIF4BQ2VIQ3 1234 aa16.15■□□□□ 0.18
RERE-204ENST00000400908 NAP1L3Q99457 506 aaPredicted RBP16.15■□□□□ 0.18
RERE-204ENST00000400908 CABP1Q9NZU7 370 aa16.15■□□□□ 0.18
RERE-204ENST00000400908 TAOK3Q9H2K8 898 aa16.15■□□□□ 0.18
RERE-204ENST00000400908 KIF21AQ7Z4S6 1674 aa16.15■□□□□ 0.18
RERE-204ENST00000400908 POTEB2H3BUK9 544 aa16.14■□□□□ 0.17
RERE-204ENST00000400908 SFPQP23246 707 aaKnown RBP eCLIP16.14■□□□□ 0.171e-6■■■□□ 17.5
RERE-204ENST00000400908 PAFAH1B1P43034 410 aa16.14■□□□□ 0.17
RERE-204ENST00000400908 ATP2B2Q01814 1243 aa16.14■□□□□ 0.17
RERE-204ENST00000400908 AIMP1Q12904 312 aaKnown RBP16.14■□□□□ 0.17
RERE-204ENST00000400908 SERPINA10Q9UK55 444 aa16.14■□□□□ 0.17
RERE-204ENST00000400908 STK3Q13188 491 aa16.14■□□□□ 0.17
RERE-204ENST00000400908 CCDC160A6NGH7 325 aa16.14■□□□□ 0.17
RERE-204ENST00000400908 URI1O94763 535 aaPredicted RBP16.14■□□□□ 0.17
RERE-204ENST00000400908 LARP1BQ659C4 914 aaKnown RBP16.14■□□□□ 0.17
RERE-204ENST00000400908 VPS36Q86VN1 386 aa16.14■□□□□ 0.17
RERE-204ENST00000400908 NLRP6P59044 892 aa16.13■□□□□ 0.17
RERE-204ENST00000400908 ATP10BO94823 1461 aa16.13■□□□□ 0.17
RERE-204ENST00000400908 CTNNBL1Q8WYA6 563 aaPredicted RBP16.13■□□□□ 0.17
RERE-204ENST00000400908 SURF6O75683 361 aaKnown RBP16.13■□□□□ 0.17
RERE-204ENST00000400908 TIGD1Q96MW7 591 aa16.13■□□□□ 0.17
RERE-204ENST00000400908 CDKL5O76039 1030 aa16.13■□□□□ 0.17
RERE-204ENST00000400908 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.13■□□□□ 0.175e-7■■■□□ 18.4
RERE-204ENST00000400908 FSD2A1L4K1 749 aa16.13■□□□□ 0.17
RERE-204ENST00000400908 MPHOSPH10O00566 681 aaKnown RBP16.13■□□□□ 0.17
RERE-204ENST00000400908 GNAI3P08754 354 aa16.13■□□□□ 0.17
RERE-204ENST00000400908 CCDC6Q16204 474 aa16.13■□□□□ 0.17
RERE-204ENST00000400908 WDR66Q8TBY9 1149 aa16.12■□□□□ 0.17
RERE-204ENST00000400908 NACAP1Q9BZK3 213 aa16.12■□□□□ 0.17
RERE-204ENST00000400908 FAM114A1Q8IWE2 563 aa16.12■□□□□ 0.17
RERE-204ENST00000400908 CTR9Q6PD62 1173 aa16.12■□□□□ 0.17
RERE-204ENST00000400908 CCDC83Q8IWF9 413 aa16.12■□□□□ 0.17
RERE-204ENST00000400908 MAPKBP1O60336 1514 aa16.12■□□□□ 0.17
RERE-204ENST00000400908 TMCO5BA8MYB1 307 aa16.12■□□□□ 0.17
RERE-204ENST00000400908 HSPA4P34932 840 aa16.12■□□□□ 0.17
RERE-204ENST00000400908 NAA15Q9BXJ9 866 aaKnown RBP16.11■□□□□ 0.17
RERE-204ENST00000400908 RAI14Q9P0K7 980 aa16.11■□□□□ 0.17
RERE-204ENST00000400908 FANCAO15360 1455 aa16.11■□□□□ 0.17
RERE-204ENST00000400908 FKBP15Q5T1M5 1219 aa16.11■□□□□ 0.17
RERE-204ENST00000400908 PRKAR2BP31323 418 aa16.11■□□□□ 0.17
RERE-204ENST00000400908 TTC39AQ5SRH9 613 aa16.11■□□□□ 0.17
RERE-204ENST00000400908 DDX46Q7L014 1031 aaKnown RBP16.11■□□□□ 0.17
RERE-204ENST00000400908 KIAA0556O60303 1618 aa16.11■□□□□ 0.17
RERE-204ENST00000400908 CFAP43Q8NDM7 1665 aa16.11■□□□□ 0.17
RERE-204ENST00000400908 K7ELQ4 463 aaPredicted RBP16.1■□□□□ 0.17
RERE-204ENST00000400908 TSNARE1Q96NA8 513 aa16.1■□□□□ 0.17
RERE-204ENST00000400908 GNL3LQ9NVN8 582 aaKnown RBP16.1■□□□□ 0.17
RERE-204ENST00000400908 NOL3O60936 208 aaKnown RBP16.1■□□□□ 0.17
RERE-204ENST00000400908 CCDC158Q5M9N0 1113 aa16.1■□□□□ 0.17
RERE-204ENST00000400908 PABPN1LA6NDY0 278 aaKnown RBP16.1■□□□□ 0.17
RERE-204ENST00000400908 NUP133Q8WUM0 1156 aa16.1■□□□□ 0.17
RERE-204ENST00000400908 USO1O60763 962 aaKnown RBP16.09■□□□□ 0.17
RERE-204ENST00000400908 MAP3K11Q16584 847 aa16.09■□□□□ 0.17
RERE-204ENST00000400908 HLTFQ14527 1009 aaKnown RBP eCLIP16.09■□□□□ 0.171e-6■■□□□ 12
RERE-204ENST00000400908 CACNA2D4Q7Z3S7 1137 aa16.09■□□□□ 0.17
RERE-204ENST00000400908 CEP112Q8N8E3 955 aa16.09■□□□□ 0.17
RERE-204ENST00000400908 ITSN2Q9NZM3 1697 aa16.09■□□□□ 0.17
RERE-204ENST00000400908 RTEL1-TNFRSF6BF6WH68 1400 aa16.09■□□□□ 0.17
RERE-204ENST00000400908 LMAN1P49257 510 aa16.09■□□□□ 0.17
RERE-204ENST00000400908 MACROD2A1Z1Q3 448 aa16.09■□□□□ 0.17
RERE-204ENST00000400908 ATF3P18847 181 aa16.09■□□□□ 0.17
RERE-204ENST00000400908 CTNNA2P26232 953 aa16.08■□□□□ 0.17
RERE-204ENST00000400908 ZNF76P36508 570 aa16.08■□□□□ 0.16
RERE-204ENST00000400908 THEMISQ8N1K5 641 aaPredicted RBP16.08■□□□□ 0.16
RERE-204ENST00000400908 RAB3IL1Q8TBN0 382 aa16.08■□□□□ 0.16
RERE-204ENST00000400908 FAM135AQ9P2D6 1515 aa16.08■□□□□ 0.16
RERE-204ENST00000400908 ABTB2Q8N961 1025 aa16.08■□□□□ 0.16
RERE-204ENST00000400908 MAATS1Q7Z4T9 603 aa16.07■□□□□ 0.16
RERE-204ENST00000400908 PPP1R14CQ8TAE6 165 aa16.07■□□□□ 0.16
RERE-204ENST00000400908 CEP131Q9UPN4 1083 aa16.07■□□□□ 0.16
RERE-204ENST00000400908 CEP83Q9Y592 693 aa16.07■□□□□ 0.16
RERE-204ENST00000400908 TSG101Q99816 390 aa16.07■□□□□ 0.16
RERE-204ENST00000400908 PPP6R1Q9UPN7 881 aa16.07■□□□□ 0.16
RERE-204ENST00000400908 WDR62O43379 1518 aa16.07■□□□□ 0.16
RERE-204ENST00000400908 NSD3Q9BZ95 1437 aa16.07■□□□□ 0.16
RERE-204ENST00000400908 EXOSC9Q06265 439 aaKnown RBP16.07■□□□□ 0.16
RERE-204ENST00000400908 WASF1Q92558 559 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms