RNA–Protein interactions for RNA: ENST00000399543.1

AC025171.2-203, humanhuman

TSL 1 (best)

Gene AC025171.2, Length 2,423 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC025171.2-203ENST00000399543 EXOC6BQ9Y2D4 811 aa16.03■□□□□ 0.16
AC025171.2-203ENST00000399543 XRN1Q8IZH2 1706 aaKnown RBP16.03■□□□□ 0.16
AC025171.2-203ENST00000399543 SALL3Q9BXA9 1300 aa16.03■□□□□ 0.16
AC025171.2-203ENST00000399543 AMPHP49418 695 aa16.03■□□□□ 0.16
AC025171.2-203ENST00000399543 DDX49Q9Y6V7 483 aaKnown RBP16.03■□□□□ 0.16
AC025171.2-203ENST00000399543 IBTKQ9P2D0 1353 aaPredicted RBP16.03■□□□□ 0.16
AC025171.2-203ENST00000399543 NGDNQ8NEJ9 315 aaKnown RBP16.02■□□□□ 0.16
AC025171.2-203ENST00000399543 STK31Q9BXU1 1019 aa16.02■□□□□ 0.16
AC025171.2-203ENST00000399543 FLIIQ13045 1269 aa16.02■□□□□ 0.15
AC025171.2-203ENST00000399543 ZGPATQ8N5A5 531 aaKnown RBP16.02■□□□□ 0.15
AC025171.2-203ENST00000399543 TSHZ3Q63HK5 1081 aa16.01■□□□□ 0.15
AC025171.2-203ENST00000399543 CEBPAP49715 358 aaPredicted RBP16■□□□□ 0.15
AC025171.2-203ENST00000399543 CWC22Q9HCG8 908 aaKnown RBP16■□□□□ 0.15
AC025171.2-203ENST00000399543 PNMA6EA0A0J9YXQ4 647 aa16■□□□□ 0.15
AC025171.2-203ENST00000399543 HTATSF1O43719 755 aaKnown RBP16■□□□□ 0.15
AC025171.2-203ENST00000399543 FKBP5Q13451 457 aaPredicted RBP16■□□□□ 0.15
AC025171.2-203ENST00000399543 MCTP1Q6DN14 999 aa16■□□□□ 0.15
AC025171.2-203ENST00000399543 MARF1Q9Y4F3 1742 aaKnown RBP16■□□□□ 0.15
AC025171.2-203ENST00000399543 EID1Q9Y6B2 187 aa16■□□□□ 0.15
AC025171.2-203ENST00000399543 N4BP2Q86UW6 1770 aaPredicted RBP16■□□□□ 0.15
AC025171.2-203ENST00000399543 ERBB4Q15303 1308 aa16■□□□□ 0.15
AC025171.2-203ENST00000399543 SLIT1O75093 1534 aa16■□□□□ 0.15
AC025171.2-203ENST00000399543 NWD1Q149M9 1564 aa16■□□□□ 0.15
AC025171.2-203ENST00000399543 ARHGAP23Q9P227 1491 aa15.99■□□□□ 0.15
AC025171.2-203ENST00000399543 GNAT3A8MTJ3 354 aa15.99■□□□□ 0.15
AC025171.2-203ENST00000399543 CCDC30Q5VVM6 783 aa15.99■□□□□ 0.15
AC025171.2-203ENST00000399543 LRRCC1Q9C099 1032 aa15.99■□□□□ 0.15
AC025171.2-203ENST00000399543 TBX22Q9Y458 520 aa15.99■□□□□ 0.15
AC025171.2-203ENST00000399543 ESPNB1AK53 854 aa15.98■□□□□ 0.15
AC025171.2-203ENST00000399543 GNAI3P08754 354 aa15.98■□□□□ 0.15
AC025171.2-203ENST00000399543 LMBRD1Q9NUN5 540 aa15.98■□□□□ 0.15
AC025171.2-203ENST00000399543 ZDHHC9Q9Y397 364 aa15.98■□□□□ 0.15
AC025171.2-203ENST00000399543 MX1P20591 662 aa15.98■□□□□ 0.15
AC025171.2-203ENST00000399543 NLRP6P59044 892 aa15.98■□□□□ 0.15
AC025171.2-203ENST00000399543 NECTIN2Q92692 538 aa15.98■□□□□ 0.15
AC025171.2-203ENST00000399543 HOXC9P31274 260 aa15.97■□□□□ 0.15
AC025171.2-203ENST00000399543 ATP8B2P98198 1209 aa15.97■□□□□ 0.15
AC025171.2-203ENST00000399543 IL17REQ8NFR9 667 aa15.97■□□□□ 0.15
AC025171.2-203ENST00000399543 ESYT1Q9BSJ8 1104 aa15.97■□□□□ 0.15
AC025171.2-203ENST00000399543 MAP3K5Q99683 1374 aa15.96■□□□□ 0.15
AC025171.2-203ENST00000399543 NASPP49321 788 aaPredicted RBP15.95■□□□□ 0.14
AC025171.2-203ENST00000399543 NEK4P51957 841 aa15.95■□□□□ 0.14
AC025171.2-203ENST00000399543 ZNF445P59923 1031 aa15.95■□□□□ 0.14
AC025171.2-203ENST00000399543 TRIM44Q96DX7 344 aaPredicted RBP15.95■□□□□ 0.14
AC025171.2-203ENST00000399543 LRRFIP2Q9Y608 721 aaKnown RBP15.95■□□□□ 0.14
AC025171.2-203ENST00000399543 PXDNLA1KZ92 1463 aa15.95■□□□□ 0.14
AC025171.2-203ENST00000399543 NUTM2GQ5VZR2 741 aa15.95■□□□□ 0.14
AC025171.2-203ENST00000399543 CAVIN1Q6NZI2 390 aaKnown RBP15.95■□□□□ 0.14
AC025171.2-203ENST00000399543 USP54Q70EL1 1684 aa15.94■□□□□ 0.14
AC025171.2-203ENST00000399543 SOS1Q07889 1333 aaPredicted RBP15.94■□□□□ 0.14
AC025171.2-203ENST00000399543 TMX3Q96JJ7 454 aa15.94■□□□□ 0.14
AC025171.2-203ENST00000399543 USP44Q9H0E7 712 aa15.94■□□□□ 0.14
AC025171.2-203ENST00000399543 STAP2Q9UGK3 403 aa15.94■□□□□ 0.14
AC025171.2-203ENST00000399543 PALD1Q9ULE6 856 aa15.94■□□□□ 0.14
AC025171.2-203ENST00000399543 CHMLP26374 656 aa15.94■□□□□ 0.14
AC025171.2-203ENST00000399543 ZSCAN23Q3MJ62 389 aa15.94■□□□□ 0.14
AC025171.2-203ENST00000399543 PPP1R9BQ96SB3 815 aa15.94■□□□□ 0.14
AC025171.2-203ENST00000399543 TAF7Q15545 349 aaPredicted RBP15.93■□□□□ 0.14
AC025171.2-203ENST00000399543 ANKARQ7Z5J8 1434 aa15.93■□□□□ 0.14
AC025171.2-203ENST00000399543 CCDC173Q0VFZ6 552 aa15.93■□□□□ 0.14
AC025171.2-203ENST00000399543 PRPF40AO75400 957 aaKnown RBP15.92■□□□□ 0.14
AC025171.2-203ENST00000399543 UNC5CLQ8IV45 518 aa15.92■□□□□ 0.14
AC025171.2-203ENST00000399543 GPT2Q8TD30 523 aa15.92■□□□□ 0.14
AC025171.2-203ENST00000399543 RILPL2Q969X0 211 aa15.92■□□□□ 0.14
AC025171.2-203ENST00000399543 CHAMP1Q96JM3 812 aa15.92■□□□□ 0.14
AC025171.2-203ENST00000399543 BABAM1Q9NWV8 329 aa15.92■□□□□ 0.14
AC025171.2-203ENST00000399543 TRIM6-TRIM34B2RNG4 842 aa15.92■□□□□ 0.14
AC025171.2-203ENST00000399543 NCLP19338 710 aaKnown RBP15.92■□□□□ 0.14
AC025171.2-203ENST00000399543 SRCIN1Q9C0H9 1055 aa15.92■□□□□ 0.14
AC025171.2-203ENST00000399543 ANO2Q9NQ90 1003 aa15.92■□□□□ 0.14
AC025171.2-203ENST00000399543 ANAPC15P60006 121 aa15.91■□□□□ 0.14
AC025171.2-203ENST00000399543 LTV1Q96GA3 475 aaPredicted RBP15.91■□□□□ 0.14
AC025171.2-203ENST00000399543 UBTFL1P0CB47 393 aaPredicted RBP15.9■□□□□ 0.14
AC025171.2-203ENST00000399543 MCM2P49736 904 aa15.9■□□□□ 0.14
AC025171.2-203ENST00000399543 CUL4AQ13619 759 aa15.9■□□□□ 0.14
AC025171.2-203ENST00000399543 HDGFL1Q5TGJ6 251 aa15.9■□□□□ 0.14
AC025171.2-203ENST00000399543 ABTB2Q8N961 1025 aa15.9■□□□□ 0.14
AC025171.2-203ENST00000399543 SSH3Q8TE77 659 aa15.9■□□□□ 0.14
AC025171.2-203ENST00000399543 PHAXQ9H814 394 aaKnown RBP15.9■□□□□ 0.14
AC025171.2-203ENST00000399543 LTN1O94822 1766 aa15.9■□□□□ 0.14
AC025171.2-203ENST00000399543 KCNA6P17658 529 aa15.89■□□□□ 0.13
AC025171.2-203ENST00000399543 MCCP23508 829 aa15.89■□□□□ 0.13
AC025171.2-203ENST00000399543 IL17RAQ96F46 866 aa15.89■□□□□ 0.13
AC025171.2-203ENST00000399543 NAP1L5Q96NT1 182 aaPredicted RBP15.89■□□□□ 0.13
AC025171.2-203ENST00000399543 IL25Q9H293 177 aa15.89■□□□□ 0.13
AC025171.2-203ENST00000399543 IL1RAPL2Q9NP60 686 aa15.89■□□□□ 0.13
AC025171.2-203ENST00000399543 AOX1Q06278 1338 aa15.89■□□□□ 0.13
AC025171.2-203ENST00000399543 USHBP1Q8N6Y0 703 aa15.89■□□□□ 0.13
AC025171.2-203ENST00000399543 CEMIPQ8WUJ3 1361 aa15.88■□□□□ 0.13
AC025171.2-203ENST00000399543 FER1L4A9Z1Z3 1794 aa15.88■□□□□ 0.13
AC025171.2-203ENST00000399543 BRD1O95696 1058 aa15.88■□□□□ 0.13
AC025171.2-203ENST00000399543 RBM27Q9P2N5 1060 aaKnown RBP15.88■□□□□ 0.13
AC025171.2-203ENST00000399543 SETD1BQ9UPS6 1966 aaKnown RBP15.87■□□□□ 0.13
AC025171.2-203ENST00000399543 PRIM1P49642 420 aaKnown RBP15.87■□□□□ 0.13
AC025171.2-203ENST00000399543 FOXD4L5Q5VV16 416 aaPredicted RBP15.87■□□□□ 0.13
AC025171.2-203ENST00000399543 THEMISQ8N1K5 641 aaPredicted RBP15.87■□□□□ 0.13
AC025171.2-203ENST00000399543 FOXD4L4Q8WXT5 416 aaPredicted RBP15.87■□□□□ 0.13
AC025171.2-203ENST00000399543 ANP32BQ92688 251 aaKnown RBP15.87■□□□□ 0.13
AC025171.2-203ENST00000399543 RBSNQ9H1K0 784 aa15.87■□□□□ 0.13
AC025171.2-203ENST00000399543 POLA2Q14181 598 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms