RNA–Protein interactions for RNA: ENST00000399537.8

TNRC18-203, Transcript of trinucleotide repeat containing 18, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TNRC18, Length 10,572 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18-203ENST00000399537 SF3B2Q13435 895 aaKnown RBP16.79■□□□□ 0.28
TNRC18-203ENST00000399537 UBXN4Q92575 508 aa16.79■□□□□ 0.28
TNRC18-203ENST00000399537 SFPQP23246 707 aaKnown RBP eCLIP16.79■□□□□ 0.286e-7■□□□□ 11.3
TNRC18-203ENST00000399537 PPP4R3AQ6IN85 833 aa16.78■□□□□ 0.28
TNRC18-203ENST00000399537 NBPF1Q3BBV0 1214 aa16.78■□□□□ 0.28
TNRC18-203ENST00000399537 SULT6B1Q6IMI4 303 aa16.78■□□□□ 0.28
TNRC18-203ENST00000399537 SRGAP3O43295 1099 aa16.78■□□□□ 0.28
TNRC18-203ENST00000399537 SCLT1Q96NL6 688 aa16.78■□□□□ 0.28
TNRC18-203ENST00000399537 BTBD11A6QL63 1104 aa16.78■□□□□ 0.28
TNRC18-203ENST00000399537 KIF5CO60282 957 aa16.78■□□□□ 0.28
TNRC18-203ENST00000399537 CCDC183Q5T5S1 534 aa16.78■□□□□ 0.28
TNRC18-203ENST00000399537 AIDAQ96BJ3 306 aa16.78■□□□□ 0.28
TNRC18-203ENST00000399537 CCDC150Q8NCX0 1101 aa16.77■□□□□ 0.28
TNRC18-203ENST00000399537 FKBP15Q5T1M5 1219 aa16.77■□□□□ 0.28
TNRC18-203ENST00000399537 CTNNBL1Q8WYA6 563 aaPredicted RBP16.77■□□□□ 0.28
TNRC18-203ENST00000399537 MCM3P25205 808 aa16.77■□□□□ 0.28
TNRC18-203ENST00000399537 GSTTP1A0A1W2PQM5 241 aa16.77■□□□□ 0.27
TNRC18-203ENST00000399537 PPM1FP49593 454 aaPredicted RBP16.77■□□□□ 0.27
TNRC18-203ENST00000399537 SYNJ2O15056 1496 aa16.77■□□□□ 0.27
TNRC18-203ENST00000399537 UBA5Q9GZZ9 404 aa16.76■□□□□ 0.27
TNRC18-203ENST00000399537 GBP3Q9H0R5 595 aa16.76■□□□□ 0.27
TNRC18-203ENST00000399537 DDX54Q8TDD1 881 aaKnown RBP16.76■□□□□ 0.27
TNRC18-203ENST00000399537 XPCQ01831 940 aaPredicted RBP16.76■□□□□ 0.27
TNRC18-203ENST00000399537 IGHMBP2P38935 993 aaKnown RBP16.76■□□□□ 0.27
TNRC18-203ENST00000399537 KLHL10Q6JEL2 608 aa16.76■□□□□ 0.27
TNRC18-203ENST00000399537 ZSCAN12O43309 604 aa16.75■□□□□ 0.27
TNRC18-203ENST00000399537 HOOK3Q86VS8 718 aa16.75■□□□□ 0.27
TNRC18-203ENST00000399537 TMOD2Q9NZR1 351 aa16.75■□□□□ 0.27
TNRC18-203ENST00000399537 PLEKHH1Q9ULM0 1364 aa16.75■□□□□ 0.27
TNRC18-203ENST00000399537 CC2D2AQ9P2K1 1620 aa16.75■□□□□ 0.27
TNRC18-203ENST00000399537 CDK19Q9BWU1 502 aa16.75■□□□□ 0.27
TNRC18-203ENST00000399537 U3KPZ7 1027 aaPredicted RBP16.75■□□□□ 0.27
TNRC18-203ENST00000399537 IDH1O75874 414 aaKnown RBP16.75■□□□□ 0.27
TNRC18-203ENST00000399537 NSD3Q9BZ95 1437 aa16.75■□□□□ 0.27
TNRC18-203ENST00000399537 CHMP4BP1P59074 171 aa16.74■□□□□ 0.27
TNRC18-203ENST00000399537 UBE4AQ14139 1066 aa16.74■□□□□ 0.27
TNRC18-203ENST00000399537 PROSER2Q86WR7 435 aaPredicted RBP16.74■□□□□ 0.27
TNRC18-203ENST00000399537 CFAP70Q5T0N1 1121 aa16.74■□□□□ 0.27
TNRC18-203ENST00000399537 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.74■□□□□ 0.272e-6■□□□□ 10.6
TNRC18-203ENST00000399537 PHAXQ9H814 394 aaKnown RBP16.74■□□□□ 0.27
TNRC18-203ENST00000399537 MACROD2A1Z1Q3 448 aa16.73■□□□□ 0.27
TNRC18-203ENST00000399537 FGFR1OPO95684 399 aaKnown RBP16.73■□□□□ 0.27
TNRC18-203ENST00000399537 GCOM1H8Y6P7 765 aaPredicted RBP16.73■□□□□ 0.27
TNRC18-203ENST00000399537 MYZAPP0CAP1 466 aa16.73■□□□□ 0.27
TNRC18-203ENST00000399537 DAPK1P53355 1430 aa16.73■□□□□ 0.27
TNRC18-203ENST00000399537 TMEM57Q8N5G2 664 aa16.73■□□□□ 0.27
TNRC18-203ENST00000399537 ANKRD30BQ9BXX2 1392 aa16.73■□□□□ 0.27
TNRC18-203ENST00000399537 PTPN14Q15678 1187 aa16.73■□□□□ 0.27
TNRC18-203ENST00000399537 NUP88Q99567 741 aaPredicted RBP16.73■□□□□ 0.27
TNRC18-203ENST00000399537 CEP126Q9P2H0 1117 aa16.73■□□□□ 0.27
TNRC18-203ENST00000399537 DNA2P51530 1060 aa16.73■□□□□ 0.27
TNRC18-203ENST00000399537 TICAM2Q86XR7 235 aa16.73■□□□□ 0.27
TNRC18-203ENST00000399537 ZNF287Q9HBT7 754 aa16.73■□□□□ 0.27
TNRC18-203ENST00000399537 RNF187Q5TA31 235 aaPredicted RBP16.72■□□□□ 0.27
TNRC18-203ENST00000399537 NBPF8Q3BBV2 869 aa16.72■□□□□ 0.27
TNRC18-203ENST00000399537 NUTM2BA6NNL0 878 aaPredicted RBP16.72■□□□□ 0.27
TNRC18-203ENST00000399537 NUTM2EB1AL46 878 aaPredicted RBP16.72■□□□□ 0.27
TNRC18-203ENST00000399537 CACNA2D4Q7Z3S7 1137 aa16.72■□□□□ 0.27
TNRC18-203ENST00000399537 NUTM2AQ8IVF1 878 aaPredicted RBP16.72■□□□□ 0.27
TNRC18-203ENST00000399537 PDIA4P13667 645 aaKnown RBP16.72■□□□□ 0.27
TNRC18-203ENST00000399537 SMC1AQ14683 1233 aaKnown RBP16.72■□□□□ 0.27
TNRC18-203ENST00000399537 KIF18AQ8NI77 898 aa16.72■□□□□ 0.27
TNRC18-203ENST00000399537 OSCARQ8IYS5 282 aa16.72■□□□□ 0.27
TNRC18-203ENST00000399537 BCCIPQ9P287 314 aaKnown RBP eCLIP16.72■□□□□ 0.271e-6■■■■□ 20.9
TNRC18-203ENST00000399537 BICDL1Q6ZP65 573 aa16.71■□□□□ 0.27
TNRC18-203ENST00000399537 CCDC85AQ96PX6 553 aaPredicted RBP16.71■□□□□ 0.27
TNRC18-203ENST00000399537 KIF14Q15058 1648 aa16.71■□□□□ 0.27
TNRC18-203ENST00000399537 RTEL1-TNFRSF6BF6WH68 1400 aa16.71■□□□□ 0.27
TNRC18-203ENST00000399537 CBX1P83916 185 aa16.71■□□□□ 0.27
TNRC18-203ENST00000399537 CLIP2Q9UDT6 1046 aa16.71■□□□□ 0.27
TNRC18-203ENST00000399537 TOP1P11387 765 aaKnown RBP16.71■□□□□ 0.27
TNRC18-203ENST00000399537 ALS2CR12Q96Q35 445 aa16.7■□□□□ 0.26
TNRC18-203ENST00000399537 CGNQ9P2M7 1197 aaKnown RBP16.7■□□□□ 0.26
TNRC18-203ENST00000399537 POLR3DP05423 398 aaPredicted RBP16.7■□□□□ 0.26
TNRC18-203ENST00000399537 FERMT3Q86UX7 667 aa16.7■□□□□ 0.26
TNRC18-203ENST00000399537 TNNT1P13805 278 aa16.7■□□□□ 0.26
TNRC18-203ENST00000399537 METTL24Q5JXM2 366 aa16.7■□□□□ 0.26
TNRC18-203ENST00000399537 AQRO60306 1485 aaKnown RBP eCLIP16.7■□□□□ 0.269e-7■■■■■ 27
TNRC18-203ENST00000399537 CCDC184Q52MB2 194 aa16.7■□□□□ 0.26
TNRC18-203ENST00000399537 TXNDC2Q86VQ3 553 aa16.7■□□□□ 0.26
TNRC18-203ENST00000399537 NUTM1Q86Y26 1132 aa16.7■□□□□ 0.26
TNRC18-203ENST00000399537 CCDC141Q6ZP82 1450 aa16.7■□□□□ 0.26
TNRC18-203ENST00000399537 LARP1Q6PKG0 1096 aaKnown RBP16.7■□□□□ 0.26
TNRC18-203ENST00000399537 C16orf45Q96MC5 204 aaPredicted RBP16.7■□□□□ 0.26
TNRC18-203ENST00000399537 CCDC96Q2M329 555 aa16.7■□□□□ 0.26
TNRC18-203ENST00000399537 CRACR2BQ8N4Y2 399 aaPredicted RBP16.69■□□□□ 0.26
TNRC18-203ENST00000399537 CUL5Q93034 780 aa16.69■□□□□ 0.26
TNRC18-203ENST00000399537 MX1P20591 662 aa16.69■□□□□ 0.26
TNRC18-203ENST00000399537 SSFA2P28290 1259 aa16.69■□□□□ 0.26
TNRC18-203ENST00000399537 TNPO1Q92973 898 aaKnown RBP16.69■□□□□ 0.26
TNRC18-203ENST00000399537 TMEM266Q2M3C6 531 aa16.69■□□□□ 0.26
TNRC18-203ENST00000399537 CUL7Q14999 1698 aa16.69■□□□□ 0.26
TNRC18-203ENST00000399537 MICALCLQ6ZW33 695 aa16.69■□□□□ 0.26
TNRC18-203ENST00000399537 ANKIB1Q9P2G1 1089 aa16.69■□□□□ 0.26
TNRC18-203ENST00000399537 ANO10Q9NW15 660 aa16.69■□□□□ 0.26
TNRC18-203ENST00000399537 COMMD10Q9Y6G5 202 aa16.69■□□□□ 0.26
TNRC18-203ENST00000399537 CDK13Q14004 1512 aaKnown RBP16.68■□□□□ 0.26
TNRC18-203ENST00000399537 CTNNA2P26232 953 aa16.68■□□□□ 0.26
TNRC18-203ENST00000399537 PRPF40BQ6NWY9 871 aaKnown RBP16.68■□□□□ 0.26
TNRC18-203ENST00000399537 SH2B1Q9NRF2 756 aaPredicted RBP16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms