RNA–Protein interactions for RNA: ENST00000399448.5

PTPN6-202, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPN6, Length 2,159 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-202ENST00000399448 RBM42Q9BTD8 480 aaKnown RBP16.91■□□□□ 0.3
PTPN6-202ENST00000399448 BRPF3Q9ULD4 1205 aa16.91■□□□□ 0.3
PTPN6-202ENST00000399448 RBM33Q96EV2 1170 aaKnown RBP16.9■□□□□ 0.3
PTPN6-202ENST00000399448 CEMIPQ8WUJ3 1361 aa16.9■□□□□ 0.3
PTPN6-202ENST00000399448 DDX11L8A8MPP1 907 aa16.89■□□□□ 0.3
PTPN6-202ENST00000399448 NBPF6Q5VWK0 638 aa16.89■□□□□ 0.3
PTPN6-202ENST00000399448 NBPF4Q96M43 638 aa16.89■□□□□ 0.3
PTPN6-202ENST00000399448 ZNF142P52746 1687 aaPredicted RBP16.89■□□□□ 0.29
PTPN6-202ENST00000399448 HSP90AA1P07900 732 aaKnown RBP16.89■□□□□ 0.29
PTPN6-202ENST00000399448 PDE1AP54750 535 aa16.89■□□□□ 0.29
PTPN6-202ENST00000399448 PXDNLA1KZ92 1463 aa16.88■□□□□ 0.29
PTPN6-202ENST00000399448 HDGFL1Q5TGJ6 251 aa16.88■□□□□ 0.29
PTPN6-202ENST00000399448 CHMP4AQ9BY43 222 aa16.88■□□□□ 0.29
PTPN6-202ENST00000399448 TRAK2O60296 914 aa16.88■□□□□ 0.29
PTPN6-202ENST00000399448 RAB3GAP1Q15042 981 aa16.88■□□□□ 0.29
PTPN6-202ENST00000399448 L1TD1Q5T7N2 865 aaKnown RBP16.88■□□□□ 0.29
PTPN6-202ENST00000399448 REC8O95072 547 aa16.87■□□□□ 0.29
PTPN6-202ENST00000399448 LRRCC1Q9C099 1032 aa16.87■□□□□ 0.29
PTPN6-202ENST00000399448 EXOC6BQ9Y2D4 811 aa16.87■□□□□ 0.29
PTPN6-202ENST00000399448 HOXB7P09629 217 aa16.87■□□□□ 0.29
PTPN6-202ENST00000399448 TNPO1Q92973 898 aaKnown RBP16.87■□□□□ 0.29
PTPN6-202ENST00000399448 PNMA6EA0A0J9YXQ4 647 aa16.86■□□□□ 0.29
PTPN6-202ENST00000399448 GBP4Q96PP9 640 aa16.86■□□□□ 0.29
PTPN6-202ENST00000399448 USP44Q9H0E7 712 aa16.86■□□□□ 0.29
PTPN6-202ENST00000399448 SALL3Q9BXA9 1300 aa16.85■□□□□ 0.29
PTPN6-202ENST00000399448 ERC2O15083 957 aa16.85■□□□□ 0.29
PTPN6-202ENST00000399448 EIF4A1P60842 406 aaKnown RBP16.85■□□□□ 0.29
PTPN6-202ENST00000399448 LGR6Q9HBX8 967 aa16.85■□□□□ 0.29
PTPN6-202ENST00000399448 LRRFIP2Q9Y608 721 aaKnown RBP16.85■□□□□ 0.29
PTPN6-202ENST00000399448 PHRF1Q9P1Y6 1649 aaKnown RBP16.85■□□□□ 0.29
PTPN6-202ENST00000399448 PLEKHO1Q53GL0 409 aaPredicted RBP16.85■□□□□ 0.29
PTPN6-202ENST00000399448 AKAP4Q5JQC9 854 aa16.85■□□□□ 0.29
PTPN6-202ENST00000399448 N4BP2Q86UW6 1770 aaPredicted RBP16.85■□□□□ 0.29
PTPN6-202ENST00000399448 MED1Q15648 1581 aaPredicted RBP16.85■□□□□ 0.29
PTPN6-202ENST00000399448 IBTKQ9P2D0 1353 aaPredicted RBP16.85■□□□□ 0.29
PTPN6-202ENST00000399448 UBTFL1P0CB47 393 aaPredicted RBP16.84■□□□□ 0.29
PTPN6-202ENST00000399448 NPHP4O75161 1426 aaPredicted RBP16.84■□□□□ 0.29
PTPN6-202ENST00000399448 ZBTB7CA1YPR0 619 aa16.84■□□□□ 0.29
PTPN6-202ENST00000399448 AMOTQ4VCS5 1084 aa16.84■□□□□ 0.29
PTPN6-202ENST00000399448 PHAXQ9H814 394 aaKnown RBP16.84■□□□□ 0.29
PTPN6-202ENST00000399448 GCP02774 474 aa16.83■□□□□ 0.28
PTPN6-202ENST00000399448 SRCIN1Q9C0H9 1055 aa16.83■□□□□ 0.28
PTPN6-202ENST00000399448 FOXD4L1Q9NU39 408 aa16.83■□□□□ 0.28
PTPN6-202ENST00000399448 SETD1BQ9UPS6 1966 aaKnown RBP16.83■□□□□ 0.28
PTPN6-202ENST00000399448 MX1P20591 662 aa16.82■□□□□ 0.28
PTPN6-202ENST00000399448 PTMSP20962 102 aa16.82■□□□□ 0.28
PTPN6-202ENST00000399448 ZNF530Q6P9A1 599 aaPredicted RBP16.82■□□□□ 0.28
PTPN6-202ENST00000399448 ARHGEF25Q86VW2 580 aa16.82■□□□□ 0.28
PTPN6-202ENST00000399448 STAP2Q9UGK3 403 aa16.82■□□□□ 0.28
PTPN6-202ENST00000399448 EIF2S2P20042 333 aaKnown RBP16.82■□□□□ 0.28
PTPN6-202ENST00000399448 TEFQ10587 303 aa16.82■□□□□ 0.28
PTPN6-202ENST00000399448 LRRC59Q96AG4 307 aaKnown RBP16.82■□□□□ 0.28
PTPN6-202ENST00000399448 ORAI2Q96SN7 254 aa16.82■□□□□ 0.28
PTPN6-202ENST00000399448 FSD2A1L4K1 749 aa16.81■□□□□ 0.28
PTPN6-202ENST00000399448 SSH3Q8TE77 659 aa16.81■□□□□ 0.28
PTPN6-202ENST00000399448 ADAMTSL3P82987 1691 aa16.81■□□□□ 0.28
PTPN6-202ENST00000399448 GOLGA6L3A6NEY3 463 aa16.81■□□□□ 0.28
PTPN6-202ENST00000399448 BTBD11A6QL63 1104 aa16.81■□□□□ 0.28
PTPN6-202ENST00000399448 LMO7Q8WWI1 1683 aa16.8■□□□□ 0.28
PTPN6-202ENST00000399448 KDM3BQ7LBC6 1761 aa16.8■□□□□ 0.28
PTPN6-202ENST00000399448 SLIT3O75094 1523 aa16.8■□□□□ 0.28
PTPN6-202ENST00000399448 ST18O60284 1047 aa16.8■□□□□ 0.28
PTPN6-202ENST00000399448 RAB11FIP3O75154 756 aa16.8■□□□□ 0.28
PTPN6-202ENST00000399448 GZF1Q9H116 711 aaPredicted RBP16.8■□□□□ 0.28
PTPN6-202ENST00000399448 CHPF2Q9P2E5 772 aa16.79■□□□□ 0.28
PTPN6-202ENST00000399448 NCAPD2Q15021 1401 aa16.79■□□□□ 0.28
PTPN6-202ENST00000399448 AOX1Q06278 1338 aa16.79■□□□□ 0.28
PTPN6-202ENST00000399448 KCNQ3O43525 872 aa16.79■□□□□ 0.28
PTPN6-202ENST00000399448 POLA2Q14181 598 aa16.79■□□□□ 0.28
PTPN6-202ENST00000399448 SKOR2Q2VWA4 1001 aaPredicted RBP16.79■□□□□ 0.28
PTPN6-202ENST00000399448 CLEC17AQ6ZS10 378 aa16.79■□□□□ 0.28
PTPN6-202ENST00000399448 RGPD2P0DJD1 1756 aa16.78■□□□□ 0.28
PTPN6-202ENST00000399448 RNMTO43148 476 aaKnown RBP16.78■□□□□ 0.28
PTPN6-202ENST00000399448 C1orf141Q5JVX7 400 aa16.78■□□□□ 0.28
PTPN6-202ENST00000399448 MPRIPQ6WCQ1 1025 aa16.78■□□□□ 0.28
PTPN6-202ENST00000399448 DNAAF4Q8WXU2 420 aa16.78■□□□□ 0.28
PTPN6-202ENST00000399448 ESYT1Q9BSJ8 1104 aa16.78■□□□□ 0.28
PTPN6-202ENST00000399448 BEND3Q5T5X7 828 aa16.78■□□□□ 0.28
PTPN6-202ENST00000399448 TSHZ3Q63HK5 1081 aa16.78■□□□□ 0.28
PTPN6-202ENST00000399448 PPP1R42Q7Z4L9 355 aa16.78■□□□□ 0.28
PTPN6-202ENST00000399448 ANKRD24Q8TF21 1146 aa16.78■□□□□ 0.28
PTPN6-202ENST00000399448 OVOS2A0A0G2JMS6 1433 aa16.77■□□□□ 0.28
PTPN6-202ENST00000399448 XPCQ01831 940 aaPredicted RBP16.77■□□□□ 0.28
PTPN6-202ENST00000399448 CWC22Q9HCG8 908 aaKnown RBP16.77■□□□□ 0.28
PTPN6-202ENST00000399448 PI4KAP2A4QPH2 592 aa16.77■□□□□ 0.27
PTPN6-202ENST00000399448 SSFA2P28290 1259 aa16.77■□□□□ 0.27
PTPN6-202ENST00000399448 NUCB2P80303 420 aa16.77■□□□□ 0.27
PTPN6-202ENST00000399448 PI4KAP1Q8N8J0 262 aa16.77■□□□□ 0.27
PTPN6-202ENST00000399448 RTN4Q9NQC3 1192 aaKnown RBP16.77■□□□□ 0.27
PTPN6-202ENST00000399448 CHMLP26374 656 aa16.76■□□□□ 0.27
PTPN6-202ENST00000399448 KRT28Q7Z3Y7 464 aa16.76■□□□□ 0.27
PTPN6-202ENST00000399448 TUBGCP6Q96RT7 1819 aa16.76■□□□□ 0.27
PTPN6-202ENST00000399448 TRIM6-TRIM34B2RNG4 842 aa16.75■□□□□ 0.27
PTPN6-202ENST00000399448 SURF6O75683 361 aaKnown RBP16.75■□□□□ 0.27
PTPN6-202ENST00000399448 LMOD2Q6P5Q4 547 aa16.75■□□□□ 0.27
PTPN6-202ENST00000399448 RILPL2Q969X0 211 aa16.75■□□□□ 0.27
PTPN6-202ENST00000399448 DBF4Q9UBU7 674 aaPredicted RBP16.75■□□□□ 0.27
PTPN6-202ENST00000399448 ISY1Q9ULR0 285 aaKnown RBP16.75■□□□□ 0.27
PTPN6-202ENST00000399448 PROSER2Q86WR7 435 aaPredicted RBP16.75■□□□□ 0.27
PTPN6-202ENST00000399448 GOLGA6L22H0YM25 854 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms