RNA–Protein interactions for RNA: ENST00000399434.2

TNRC18-202, Transcript of trinucleotide repeat containing 18, humanhuman

TSL 2 BASIC

Gene TNRC18, Length 1,459 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18-202ENST00000399434 TSPYL4Q9UJ04 414 aa21.05■□□□□ 0.96
TNRC18-202ENST00000399434 RCAN3Q9UKA8 241 aa21.05■□□□□ 0.96
TNRC18-202ENST00000399434 TEFQ10587 303 aa21.04■□□□□ 0.96
TNRC18-202ENST00000399434 KRT24Q2M2I5 525 aa21.04■□□□□ 0.96
TNRC18-202ENST00000399434 MARCH10Q8NA82 808 aaPredicted RBP21.04■□□□□ 0.96
TNRC18-202ENST00000399434 QTRT2Q9H974 415 aaKnown RBP21.04■□□□□ 0.96
TNRC18-202ENST00000399434 BABAM1Q9NWV8 329 aa21.04■□□□□ 0.96
TNRC18-202ENST00000399434 RGS17Q9UGC6 210 aaPredicted RBP21.04■□□□□ 0.96
TNRC18-202ENST00000399434 TSPYL6Q8N831 410 aa21.03■□□□□ 0.96
TNRC18-202ENST00000399434 C8orf58Q8NAV2 365 aa21.03■□□□□ 0.96
TNRC18-202ENST00000399434 KCNQ3O43525 872 aa21.02■□□□□ 0.96
TNRC18-202ENST00000399434 ONECUT3O60422 494 aaPredicted RBP21.02■□□□□ 0.96
TNRC18-202ENST00000399434 RNF123Q5XPI4 1314 aa21.02■□□□□ 0.96
TNRC18-202ENST00000399434 NFATC2IPQ8NCF5 419 aa21.01■□□□□ 0.95
TNRC18-202ENST00000399434 SUPT16HQ9Y5B9 1047 aaKnown RBP21.01■□□□□ 0.95
TNRC18-202ENST00000399434 SBF2Q86WG5 1849 aa21■□□□□ 0.95
TNRC18-202ENST00000399434 KCPQ6ZWJ8 1503 aa21■□□□□ 0.95
TNRC18-202ENST00000399434 ERVV-2B6SEH9 535 aa21■□□□□ 0.95
TNRC18-202ENST00000399434 LAMB4A4D0S4 1761 aa20.99■□□□□ 0.95
TNRC18-202ENST00000399434 NHSQ6T4R5 1651 aa20.99■□□□□ 0.95
TNRC18-202ENST00000399434 BTBD11A6QL63 1104 aa20.99■□□□□ 0.95
TNRC18-202ENST00000399434 ZNF772Q68DY9 489 aaPredicted RBP20.99■□□□□ 0.95
TNRC18-202ENST00000399434 CT47B1P0C2W7 299 aaPredicted RBP20.98■□□□□ 0.95
TNRC18-202ENST00000399434 CABP4P57796 275 aa20.98■□□□□ 0.95
TNRC18-202ENST00000399434 HEG1Q9ULI3 1381 aa20.98■□□□□ 0.95
TNRC18-202ENST00000399434 VAMP4O75379 141 aa20.97■□□□□ 0.95
TNRC18-202ENST00000399434 RARSP54136 660 aaKnown RBP20.97■□□□□ 0.95
TNRC18-202ENST00000399434 EIF4A1P60842 406 aaKnown RBP20.97■□□□□ 0.95
TNRC18-202ENST00000399434 BCL9O00512 1426 aa20.97■□□□□ 0.95
TNRC18-202ENST00000399434 ELL2O00472 640 aaPredicted RBP20.96■□□□□ 0.95
TNRC18-202ENST00000399434 SLC39A6Q13433 755 aa20.96■□□□□ 0.95
TNRC18-202ENST00000399434 TWISTNBQ3B726 338 aaPredicted RBP20.96■□□□□ 0.95
TNRC18-202ENST00000399434 SEPT12Q8IYM1 358 aa20.96■□□□□ 0.95
TNRC18-202ENST00000399434 A0A0G2JS52 829 aa20.94■□□□□ 0.94
TNRC18-202ENST00000399434 BCAR3O75815 825 aa20.94■□□□□ 0.94
TNRC18-202ENST00000399434 MYT1Q01538 1121 aa20.94■□□□□ 0.94
TNRC18-202ENST00000399434 ZNF790Q6PG37 636 aa20.94■□□□□ 0.94
TNRC18-202ENST00000399434 BTAF1O14981 1849 aa20.93■□□□□ 0.94
TNRC18-202ENST00000399434 RRP1P56182 461 aaKnown RBP20.93■□□□□ 0.94
TNRC18-202ENST00000399434 RBM6P78332 1123 aaKnown RBP20.93■□□□□ 0.94
TNRC18-202ENST00000399434 SSH1Q8WYL5 1049 aa20.93■□□□□ 0.94
TNRC18-202ENST00000399434 PIGBQ92521 554 aa20.93■□□□□ 0.94
TNRC18-202ENST00000399434 BCL2L13Q9BXK5 485 aa20.93■□□□□ 0.94
TNRC18-202ENST00000399434 TJP1Q07157 1748 aa20.92■□□□□ 0.94
TNRC18-202ENST00000399434 KAT6BQ8WYB5 2073 aa20.92■□□□□ 0.94
TNRC18-202ENST00000399434 RGS12O14924 1447 aa20.92■□□□□ 0.94
TNRC18-202ENST00000399434 TMOD3Q9NYL9 352 aa20.92■□□□□ 0.94
TNRC18-202ENST00000399434 POTEAQ6S8J7 498 aa20.91■□□□□ 0.94
TNRC18-202ENST00000399434 CICQ96RK0 1608 aaPredicted RBP20.91■□□□□ 0.94
TNRC18-202ENST00000399434 PRIM1P49642 420 aaKnown RBP20.9■□□□□ 0.94
TNRC18-202ENST00000399434 ZNF496Q96IT1 587 aaPredicted RBP20.9■□□□□ 0.94
TNRC18-202ENST00000399434 CACNA1FO60840 1977 aa20.9■□□□□ 0.94
TNRC18-202ENST00000399434 PRAMEF22A3QJZ6 481 aa20.89■□□□□ 0.94
TNRC18-202ENST00000399434 FAM182BQ5T319 152 aa20.89■□□□□ 0.94
TNRC18-202ENST00000399434 ZNF428Q96B54 188 aa20.89■□□□□ 0.94
TNRC18-202ENST00000399434 ACSBG1Q96GR2 724 aa20.89■□□□□ 0.94
TNRC18-202ENST00000399434 SOS1Q07889 1333 aaPredicted RBP20.89■□□□□ 0.93
TNRC18-202ENST00000399434 TCERG1O14776 1098 aaKnown RBP20.88■□□□□ 0.93
TNRC18-202ENST00000399434 PLIN1O60240 522 aa20.88■□□□□ 0.93
TNRC18-202ENST00000399434 ALDH1L2Q3SY69 923 aa20.88■□□□□ 0.93
TNRC18-202ENST00000399434 GIGYF1O75420 1035 aaPredicted RBP20.88■□□□□ 0.93
TNRC18-202ENST00000399434 SMC4Q9NTJ3 1288 aa20.88■□□□□ 0.93
TNRC18-202ENST00000399434 ASAP1Q9ULH1 1129 aa20.88■□□□□ 0.93
TNRC18-202ENST00000399434 KCNQ2O43526 872 aa20.87■□□□□ 0.93
TNRC18-202ENST00000399434 HOXB7P09629 217 aa20.87■□□□□ 0.93
TNRC18-202ENST00000399434 MRPL50Q8N5N7 158 aaKnown RBP20.87■□□□□ 0.93
TNRC18-202ENST00000399434 ATG3Q9NT62 314 aa20.87■□□□□ 0.93
TNRC18-202ENST00000399434 TTC5Q8N0Z6 440 aa20.86■□□□□ 0.93
TNRC18-202ENST00000399434 ZNF831Q5JPB2 1677 aa20.85■□□□□ 0.93
TNRC18-202ENST00000399434 BRPF1P55201 1214 aaPredicted RBP20.85■□□□□ 0.93
TNRC18-202ENST00000399434 IRX6P78412 446 aaPredicted RBP20.85■□□□□ 0.93
TNRC18-202ENST00000399434 PTF1AQ7RTS3 328 aa20.85■□□□□ 0.93
TNRC18-202ENST00000399434 SYTL4Q96C24 671 aaPredicted RBP20.85■□□□□ 0.93
TNRC18-202ENST00000399434 LY75O60449 1722 aa20.84■□□□□ 0.93
TNRC18-202ENST00000399434 RXRBP28702 533 aa20.84■□□□□ 0.93
TNRC18-202ENST00000399434 FMNL2Q96PY5 1086 aa20.84■□□□□ 0.93
TNRC18-202ENST00000399434 TNNQ9UQP3 1299 aa20.84■□□□□ 0.93
TNRC18-202ENST00000399434 C20orf194Q5TEA3 1177 aa20.83■□□□□ 0.93
TNRC18-202ENST00000399434 COL5A3P25940 1745 aaPredicted RBP20.83■□□□□ 0.92
TNRC18-202ENST00000399434 N4BP2Q86UW6 1770 aaPredicted RBP20.83■□□□□ 0.92
TNRC18-202ENST00000399434 KRT27Q7Z3Y8 459 aa20.82■□□□□ 0.92
TNRC18-202ENST00000399434 NECTIN2Q92692 538 aa20.82■□□□□ 0.92
TNRC18-202ENST00000399434 HDGFL1Q5TGJ6 251 aa20.81■□□□□ 0.92
TNRC18-202ENST00000399434 SLC4A9Q96Q91 983 aa20.81■□□□□ 0.92
TNRC18-202ENST00000399434 RREB1Q92766 1687 aa20.81■□□□□ 0.92
TNRC18-202ENST00000399434 PTCD1O75127 700 aaKnown RBP20.81■□□□□ 0.92
TNRC18-202ENST00000399434 KIF16BQ96L93 1317 aa20.8■□□□□ 0.92
TNRC18-202ENST00000399434 SNRPA1P09661 255 aaKnown RBP20.8■□□□□ 0.92
TNRC18-202ENST00000399434 FRAT1Q92837 279 aaPredicted RBP20.8■□□□□ 0.92
TNRC18-202ENST00000399434 NOB1Q9ULX3 412 aaKnown RBP20.8■□□□□ 0.92
TNRC18-202ENST00000399434 TNS1Q9HBL0 1735 aaKnown RBP20.8■□□□□ 0.92
TNRC18-202ENST00000399434 EIF2S2P20042 333 aaKnown RBP20.79■□□□□ 0.92
TNRC18-202ENST00000399434 CCDC30Q5VVM6 783 aa20.79■□□□□ 0.92
TNRC18-202ENST00000399434 G2E3Q7L622 706 aa20.79■□□□□ 0.92
TNRC18-202ENST00000399434 PALLDQ8WX93 1383 aa20.78■□□□□ 0.92
TNRC18-202ENST00000399434 CHPF2Q9P2E5 772 aa20.78■□□□□ 0.92
TNRC18-202ENST00000399434 GTF3C3Q9Y5Q9 886 aa20.78■□□□□ 0.92
TNRC18-202ENST00000399434 USP16Q9Y5T5 823 aa20.78■□□□□ 0.92
TNRC18-202ENST00000399434 RLBP1P12271 317 aa20.77■□□□□ 0.92
TNRC18-202ENST00000399434 TRIM27P14373 513 aa20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms