RNA–Protein interactions for RNA: ENST00000399410.7

ABCC1-202, Transcript of ATP binding cassette subfamily C member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCC1, Length 6,552 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC1-202ENST00000399410 LRRFIP2Q9Y608 721 aaKnown RBP18.05■□□□□ 0.48
ABCC1-202ENST00000399410 FLIIQ13045 1269 aa18.05■□□□□ 0.48
ABCC1-202ENST00000399410 NUP62CLQ9H1M0 184 aa18.05■□□□□ 0.48
ABCC1-202ENST00000399410 MTERF4Q7Z6M4 381 aaKnown RBP18.05■□□□□ 0.48
ABCC1-202ENST00000399410 ATP2B2Q01814 1243 aa18.05■□□□□ 0.48
ABCC1-202ENST00000399410 SOGA3Q5TF21 947 aa18.05■□□□□ 0.48
ABCC1-202ENST00000399410 TTLL5Q6EMB2 1281 aa18.05■□□□□ 0.48
ABCC1-202ENST00000399410 HYPKQ9NX55 129 aa18.05■□□□□ 0.48
ABCC1-202ENST00000399410 CEBPAP49715 358 aaPredicted RBP18.04■□□□□ 0.48
ABCC1-202ENST00000399410 PLCH2O75038 1416 aa18.04■□□□□ 0.48
ABCC1-202ENST00000399410 CDR1P51861 262 aa18.04■□□□□ 0.48
ABCC1-202ENST00000399410 UPF3BQ9BZI7 483 aaKnown RBP18.04■□□□□ 0.48
ABCC1-202ENST00000399410 MAPKBP1O60336 1514 aa18.04■□□□□ 0.48
ABCC1-202ENST00000399410 WASF1Q92558 559 aa18.04■□□□□ 0.48
ABCC1-202ENST00000399410 BOLA2Q9H3K6 86 aa18.04■□□□□ 0.48
ABCC1-202ENST00000399410 U3KPZ7 1027 aaPredicted RBP18.04■□□□□ 0.48
ABCC1-202ENST00000399410 BCL11BQ9C0K0 894 aaPredicted RBP18.03■□□□□ 0.48
ABCC1-202ENST00000399410 MBIPQ9NS73 344 aa18.03■□□□□ 0.48
ABCC1-202ENST00000399410 ATP10BO94823 1461 aa18.03■□□□□ 0.48
ABCC1-202ENST00000399410 SPINK5Q9NQ38 1064 aaPredicted RBP18.03■□□□□ 0.48
ABCC1-202ENST00000399410 NUP160Q12769 1436 aa18.03■□□□□ 0.48
ABCC1-202ENST00000399410 CEP57L1Q8IYX8 460 aa18.03■□□□□ 0.48
ABCC1-202ENST00000399410 STIM1Q13586 685 aa18.02■□□□□ 0.48
ABCC1-202ENST00000399410 MAP7D2Q96T17 732 aa18.02■□□□□ 0.48
ABCC1-202ENST00000399410 DUOX2Q9NRD8 1548 aa18.02■□□□□ 0.48
ABCC1-202ENST00000399410 BICDL1Q6ZP65 573 aa18.02■□□□□ 0.48
ABCC1-202ENST00000399410 ODF2Q5BJF6 829 aa18.02■□□□□ 0.48
ABCC1-202ENST00000399410 CCDC83Q8IWF9 413 aa18.02■□□□□ 0.47
ABCC1-202ENST00000399410 ACEP12821 1306 aa18.01■□□□□ 0.47
ABCC1-202ENST00000399410 DDX11Q96FC9 970 aa18.01■□□□□ 0.47
ABCC1-202ENST00000399410 NUP153P49790 1475 aaKnown RBP18.01■□□□□ 0.47
ABCC1-202ENST00000399410 IFIT1P09914 478 aaKnown RBP18.01■□□□□ 0.47
ABCC1-202ENST00000399410 ERCC4Q92889 916 aaPredicted RBP18.01■□□□□ 0.47
ABCC1-202ENST00000399410 ZNHIT6Q9NWK9 470 aaKnown RBP18.01■□□□□ 0.47
ABCC1-202ENST00000399410 ZNF652Q9Y2D9 606 aa18.01■□□□□ 0.47
ABCC1-202ENST00000399410 PPFIBP1Q86W92 1011 aa18■□□□□ 0.47
ABCC1-202ENST00000399410 SH2B1Q9NRF2 756 aaPredicted RBP18■□□□□ 0.47
ABCC1-202ENST00000399410 CBFA2T2O43439 604 aa18■□□□□ 0.47
ABCC1-202ENST00000399410 CCDC8Q9H0W5 538 aaPredicted RBP17.99■□□□□ 0.47
ABCC1-202ENST00000399410 ABCF2Q9UG63 623 aa17.99■□□□□ 0.47
ABCC1-202ENST00000399410 PLEKHH1Q9ULM0 1364 aa17.99■□□□□ 0.47
ABCC1-202ENST00000399410 BMP2KLQ5H9B9 411 aa17.99■□□□□ 0.47
ABCC1-202ENST00000399410 FAM83GA6ND36 823 aa17.99■□□□□ 0.47
ABCC1-202ENST00000399410 FERMT3Q86UX7 667 aa17.98■□□□□ 0.47
ABCC1-202ENST00000399410 IFIT5Q13325 482 aaKnown RBP17.98■□□□□ 0.47
ABCC1-202ENST00000399410 HSP90AB3PQ58FF7 597 aa17.98■□□□□ 0.47
ABCC1-202ENST00000399410 PRAG1Q86YV5 1406 aa17.98■□□□□ 0.47
ABCC1-202ENST00000399410 ASXL1Q8IXJ9 1541 aa17.98■□□□□ 0.47
ABCC1-202ENST00000399410 MAP3K11Q16584 847 aa17.98■□□□□ 0.47
ABCC1-202ENST00000399410 TNRQ92752 1358 aa17.97■□□□□ 0.47
ABCC1-202ENST00000399410 PIP4K2BP78356 416 aa17.97■□□□□ 0.47
ABCC1-202ENST00000399410 TBC1D2Q9BYX2 928 aa17.97■□□□□ 0.47
ABCC1-202ENST00000399410 ITSN2Q9NZM3 1697 aa17.97■□□□□ 0.47
ABCC1-202ENST00000399410 PIK3R4Q99570 1358 aa17.97■□□□□ 0.47
ABCC1-202ENST00000399410 MPNDQ8N594 471 aa17.97■□□□□ 0.47
ABCC1-202ENST00000399410 ARHGAP45Q92619 1136 aa17.97■□□□□ 0.47
ABCC1-202ENST00000399410 A0A087WZG4 1122 aa17.97■□□□□ 0.47
ABCC1-202ENST00000399410 RBM5P52756 815 aaKnown RBP eCLIP17.97■□□□□ 0.471e-6■■□□□ 13.4
ABCC1-202ENST00000399410 KRT28Q7Z3Y7 464 aa17.97■□□□□ 0.47
ABCC1-202ENST00000399410 HMGB1P09429 215 aaKnown RBP17.96■□□□□ 0.47
ABCC1-202ENST00000399410 SYCE3A1L190 88 aa17.96■□□□□ 0.47
ABCC1-202ENST00000399410 IGHDP01880 384 aa17.96■□□□□ 0.47
ABCC1-202ENST00000399410 ZFYVE27Q5T4F4 411 aa17.96■□□□□ 0.47
ABCC1-202ENST00000399410 SYCP2Q9BX26 1530 aa17.96■□□□□ 0.47
ABCC1-202ENST00000399410 ECHDC1Q9NTX5 307 aa17.96■□□□□ 0.47
ABCC1-202ENST00000399410 PHF23Q9BUL5 403 aaPredicted RBP17.96■□□□□ 0.47
ABCC1-202ENST00000399410 HSP90AB2PQ58FF8 381 aa17.95■□□□□ 0.46
ABCC1-202ENST00000399410 IFNL2Q8IZJ0 200 aa17.95■□□□□ 0.46
ABCC1-202ENST00000399410 MAP3K2Q9Y2U5 619 aa17.95■□□□□ 0.46
ABCC1-202ENST00000399410 CAVIN4Q5BKX8 364 aa17.95■□□□□ 0.46
ABCC1-202ENST00000399410 SCAND2PQ9GZW5 306 aaPredicted RBP17.95■□□□□ 0.46
ABCC1-202ENST00000399410 EVI5LQ96CN4 794 aa17.95■□□□□ 0.46
ABCC1-202ENST00000399410 LIMCH1Q9UPQ0 1083 aa17.95■□□□□ 0.46
ABCC1-202ENST00000399410 TBC1D9Q6ZT07 1266 aa17.95■□□□□ 0.46
ABCC1-202ENST00000399410 IL27Q8NEV9 243 aa17.95■□□□□ 0.46
ABCC1-202ENST00000399410 TRMT112Q9UI30 125 aaKnown RBP17.95■□□□□ 0.46
ABCC1-202ENST00000399410 HMGB2P26583 209 aaKnown RBP17.95■□□□□ 0.46
ABCC1-202ENST00000399410 CEP131Q9UPN4 1083 aa17.95■□□□□ 0.46
ABCC1-202ENST00000399410 A2MP01023 1474 aa17.94■□□□□ 0.46
ABCC1-202ENST00000399410 SMTNL1A8MU46 457 aa17.94■□□□□ 0.46
ABCC1-202ENST00000399410 TCOF1Q13428 1488 aaKnown RBP17.94■□□□□ 0.46
ABCC1-202ENST00000399410 TTC21AQ8NDW8 1320 aa17.94■□□□□ 0.46
ABCC1-202ENST00000399410 ZHX3Q9H4I2 956 aa17.94■□□□□ 0.46
ABCC1-202ENST00000399410 PARD3Q8TEW0 1356 aa17.94■□□□□ 0.46
ABCC1-202ENST00000399410 CCDC112Q8NEF3 446 aa17.94■□□□□ 0.46
ABCC1-202ENST00000399410 NAPBQ9H115 298 aa17.94■□□□□ 0.46
ABCC1-202ENST00000399410 MAP3K12Q12852 859 aa17.94■□□□□ 0.46
ABCC1-202ENST00000399410 MYO6Q9UM54 1294 aa17.94■□□□□ 0.46
ABCC1-202ENST00000399410 SF3B2Q13435 895 aaKnown RBP17.93■□□□□ 0.46
ABCC1-202ENST00000399410 HDAC1Q13547 482 aaPredicted RBP17.93■□□□□ 0.46
ABCC1-202ENST00000399410 SYCP1Q15431 976 aa17.93■□□□□ 0.46
ABCC1-202ENST00000399410 LUC7LQ9NQ29 371 aaKnown RBP17.93■□□□□ 0.46
ABCC1-202ENST00000399410 ZSCAN29Q8IWY8 852 aaPredicted RBP17.93■□□□□ 0.46
ABCC1-202ENST00000399410 BMP2KQ9NSY1 1161 aaPredicted RBP17.93■□□□□ 0.46
ABCC1-202ENST00000399410 ASXL2Q76L83 1435 aa17.93■□□□□ 0.46
ABCC1-202ENST00000399410 ANKRD18BA2A2Z9 1011 aa17.93■□□□□ 0.46
ABCC1-202ENST00000399410 PI4KAP2A4QPH2 592 aa17.92■□□□□ 0.46
ABCC1-202ENST00000399410 ESPNB1AK53 854 aa17.92■□□□□ 0.46
ABCC1-202ENST00000399410 PI4KAP1Q8N8J0 262 aa17.92■□□□□ 0.46
ABCC1-202ENST00000399410 TTC22Q5TAA0 569 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms