RNA–Protein interactions for RNA: ENST00000399196.1

LINC00243-201, long intergenic non-protein coding RNA 243, humanhuman

TSL 2 BASIC

Gene LINC00243, Length 2,052 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00243-201ENST00000399196 PLCH1Q4KWH8 1693 aa12.01□□□□□ -0.49
LINC00243-201ENST00000399196 COL14A1Q05707 1796 aaKnown RBP12.01□□□□□ -0.49
LINC00243-201ENST00000399196 IPO8O15397 1037 aaKnown RBP12.01□□□□□ -0.49
LINC00243-201ENST00000399196 IL17REQ8NFR9 667 aa12.01□□□□□ -0.49
LINC00243-201ENST00000399196 COL5A2P05997 1499 aaPredicted RBP12□□□□□ -0.49
LINC00243-201ENST00000399196 NCAPD2Q15021 1401 aa12□□□□□ -0.49
LINC00243-201ENST00000399196 RGS3P49796 1198 aa12□□□□□ -0.49
LINC00243-201ENST00000399196 AKAP4Q5JQC9 854 aa11.99□□□□□ -0.49
LINC00243-201ENST00000399196 ZBTB40Q9NUA8 1239 aa11.99□□□□□ -0.49
LINC00243-201ENST00000399196 FAM208AQ9UK61 1670 aaKnown RBP11.99□□□□□ -0.49
LINC00243-201ENST00000399196 NRAPQ86VF7 1730 aa11.99□□□□□ -0.49
LINC00243-201ENST00000399196 TATP17735 454 aaPredicted RBP11.99□□□□□ -0.49
LINC00243-201ENST00000399196 AAMPQ13685 434 aa11.99□□□□□ -0.49
LINC00243-201ENST00000399196 PPP4R3CPQ6ZMV5 832 aa11.99□□□□□ -0.49
LINC00243-201ENST00000399196 DDX19BQ9UMR2 479 aa11.99□□□□□ -0.49
LINC00243-201ENST00000399196 RGS12O14924 1447 aa11.99□□□□□ -0.49
LINC00243-201ENST00000399196 TAF7Q15545 349 aaPredicted RBP11.98□□□□□ -0.49
LINC00243-201ENST00000399196 ABCC4O15439 1325 aa11.98□□□□□ -0.49
LINC00243-201ENST00000399196 TEFQ10587 303 aa11.98□□□□□ -0.49
LINC00243-201ENST00000399196 ARHGAP45Q92619 1136 aa11.98□□□□□ -0.49
LINC00243-201ENST00000399196 BTG4Q9NY30 223 aa11.98□□□□□ -0.49
LINC00243-201ENST00000399196 SPATA31A6Q5VVP1 1343 aa11.97□□□□□ -0.49
LINC00243-201ENST00000399196 VIRMAQ69YN4 1812 aaKnown RBP11.97□□□□□ -0.49
LINC00243-201ENST00000399196 MPRIPQ6WCQ1 1025 aa11.97□□□□□ -0.49
LINC00243-201ENST00000399196 TOM1L2Q6ZVM7 507 aa11.97□□□□□ -0.49
LINC00243-201ENST00000399196 FBXO41Q8TF61 875 aa11.97□□□□□ -0.49
LINC00243-201ENST00000399196 SPG7Q9UQ90 795 aa11.97□□□□□ -0.49
LINC00243-201ENST00000399196 ZBTB7BO15156 539 aaPredicted RBP11.96□□□□□ -0.49
LINC00243-201ENST00000399196 EVA1CP58658 441 aa11.96□□□□□ -0.49
LINC00243-201ENST00000399196 C8orf34Q49A92 452 aa11.96□□□□□ -0.49
LINC00243-201ENST00000399196 LGR6Q9HBX8 967 aa11.96□□□□□ -0.49
LINC00243-201ENST00000399196 BABAM1Q9NWV8 329 aa11.96□□□□□ -0.49
LINC00243-201ENST00000399196 SLIT2O94813 1529 aa11.96□□□□□ -0.49
LINC00243-201ENST00000399196 LARP1Q6PKG0 1096 aaKnown RBP11.96□□□□□ -0.5
LINC00243-201ENST00000399196 STRN4Q9NRL3 753 aa11.96□□□□□ -0.5
LINC00243-201ENST00000399196 PDZRN3Q9UPQ7 1066 aa11.96□□□□□ -0.5
LINC00243-201ENST00000399196 WDR17Q8IZU2 1322 aa11.96□□□□□ -0.5
LINC00243-201ENST00000399196 CEMIPQ8WUJ3 1361 aa11.95□□□□□ -0.5
LINC00243-201ENST00000399196 FOXD4L1Q9NU39 408 aa11.95□□□□□ -0.5
LINC00243-201ENST00000399196 RNMTO43148 476 aaKnown RBP11.95□□□□□ -0.5
LINC00243-201ENST00000399196 G2E3Q7L622 706 aa11.95□□□□□ -0.5
LINC00243-201ENST00000399196 C8orf37Q96NL8 207 aa11.95□□□□□ -0.5
LINC00243-201ENST00000399196 C1orf115Q9H7X2 142 aa11.95□□□□□ -0.5
LINC00243-201ENST00000399196 NWD2Q9ULI1 1742 aa11.94□□□□□ -0.5
LINC00243-201ENST00000399196 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.94□□□□□ -0.5
LINC00243-201ENST00000399196 MEGF6O75095 1541 aa11.93□□□□□ -0.5
LINC00243-201ENST00000399196 HDAC1Q13547 482 aaPredicted RBP11.93□□□□□ -0.5
LINC00243-201ENST00000399196 RWDD1Q9H446 243 aaPredicted RBP11.93□□□□□ -0.5
LINC00243-201ENST00000399196 BCL9LQ86UU0 1499 aa11.93□□□□□ -0.5
LINC00243-201ENST00000399196 BTBD11A6QL63 1104 aa11.93□□□□□ -0.5
LINC00243-201ENST00000399196 SLC4A2P04920 1241 aa11.92□□□□□ -0.5
LINC00243-201ENST00000399196 SIRT2Q8IXJ6 389 aa11.92□□□□□ -0.5
LINC00243-201ENST00000399196 IFNL2Q8IZJ0 200 aa11.92□□□□□ -0.5
LINC00243-201ENST00000399196 STK31Q9BXU1 1019 aa11.92□□□□□ -0.5
LINC00243-201ENST00000399196 API5Q9BZZ5 524 aaKnown RBP11.92□□□□□ -0.5
LINC00243-201ENST00000399196 PLEKHG2Q9H7P9 1386 aa11.92□□□□□ -0.5
LINC00243-201ENST00000399196 KDM3BQ7LBC6 1761 aa11.92□□□□□ -0.5
LINC00243-201ENST00000399196 KCNQ3O43525 872 aa11.91□□□□□ -0.5
LINC00243-201ENST00000399196 SMC5Q8IY18 1101 aa11.91□□□□□ -0.5
LINC00243-201ENST00000399196 CARD10Q9BWT7 1032 aa11.91□□□□□ -0.5
LINC00243-201ENST00000399196 OVOS2A0A0G2JMS6 1433 aa11.91□□□□□ -0.5
LINC00243-201ENST00000399196 PHKG2P15735 406 aa11.91□□□□□ -0.5
LINC00243-201ENST00000399196 SOS1Q07889 1333 aaPredicted RBP11.91□□□□□ -0.5
LINC00243-201ENST00000399196 FAM161AQ3B820 660 aa11.91□□□□□ -0.5
LINC00243-201ENST00000399196 CCDC30Q5VVM6 783 aa11.91□□□□□ -0.5
LINC00243-201ENST00000399196 NGLY1Q96IV0 654 aa11.91□□□□□ -0.5
LINC00243-201ENST00000399196 INTS3Q68E01 1043 aaKnown RBP11.9□□□□□ -0.5
LINC00243-201ENST00000399196 FNBP4Q8N3X1 1017 aaPredicted RBP11.9□□□□□ -0.5
LINC00243-201ENST00000399196 NECTIN2Q92692 538 aa11.9□□□□□ -0.5
LINC00243-201ENST00000399196 USP35Q9P2H5 1018 aa11.9□□□□□ -0.5
LINC00243-201ENST00000399196 CACNA1FO60840 1977 aa11.9□□□□□ -0.5
LINC00243-201ENST00000399196 F6X3S4 739 aa11.9□□□□□ -0.51
LINC00243-201ENST00000399196 HSP90AB1P08238 724 aaKnown RBP11.9□□□□□ -0.51
LINC00243-201ENST00000399196 IL2RBP14784 551 aa11.9□□□□□ -0.51
LINC00243-201ENST00000399196 CHMP4BQ9H444 224 aaKnown RBP11.9□□□□□ -0.51
LINC00243-201ENST00000399196 WNK3Q9BYP7 1800 aa11.89□□□□□ -0.51
LINC00243-201ENST00000399196 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.89□□□□□ -0.51
LINC00243-201ENST00000399196 MEX3CQ5U5Q3 659 aaKnown RBP11.89□□□□□ -0.51
LINC00243-201ENST00000399196 ZCRB1Q8TBF4 217 aaKnown RBP11.89□□□□□ -0.51
LINC00243-201ENST00000399196 DCAF5Q96JK2 942 aa11.89□□□□□ -0.51
LINC00243-201ENST00000399196 CHMP4AQ9BY43 222 aa11.89□□□□□ -0.51
LINC00243-201ENST00000399196 SIPA1L3O60292 1781 aaPredicted RBP11.89□□□□□ -0.51
LINC00243-201ENST00000399196 ADAMTS7Q9UKP4 1686 aa11.88□□□□□ -0.51
LINC00243-201ENST00000399196 PTPRCP08575 1304 aa11.88□□□□□ -0.51
LINC00243-201ENST00000399196 AFF2P51816 1311 aa11.88□□□□□ -0.51
LINC00243-201ENST00000399196 PCDH11XQ9BZA7 1347 aa11.88□□□□□ -0.51
LINC00243-201ENST00000399196 PCDH11YQ9BZA8 1340 aa11.88□□□□□ -0.51
LINC00243-201ENST00000399196 CYP27B1O15528 508 aa11.88□□□□□ -0.51
LINC00243-201ENST00000399196 EIF4A1P60842 406 aaKnown RBP11.88□□□□□ -0.51
LINC00243-201ENST00000399196 HDGFL1Q5TGJ6 251 aa11.88□□□□□ -0.51
LINC00243-201ENST00000399196 UNC5CLQ8IV45 518 aa11.88□□□□□ -0.51
LINC00243-201ENST00000399196 SHANK3Q9BYB0 1731 aa11.88□□□□□ -0.51
LINC00243-201ENST00000399196 SLC52A2Q9HAB3 445 aa11.88□□□□□ -0.51
LINC00243-201ENST00000399196 PKD1L3Q7Z443 1732 aa11.88□□□□□ -0.51
LINC00243-201ENST00000399196 PARP4Q9UKK3 1724 aaKnown RBP11.88□□□□□ -0.51
LINC00243-201ENST00000399196 DISP2A7MBM2 1401 aa11.88□□□□□ -0.51
LINC00243-201ENST00000399196 SPATA31A1Q5TZJ5 1347 aa11.87□□□□□ -0.51
LINC00243-201ENST00000399196 SEC24BO95487 1268 aa11.87□□□□□ -0.51
LINC00243-201ENST00000399196 USP21Q9UK80 565 aa11.87□□□□□ -0.51
LINC00243-201ENST00000399196 ATP10DQ9P241 1426 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms