RNA–Protein interactions for RNA: ENST00000398137.5

U2AF1-203, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-203ENST00000398137 U2SURPO15042 1029 aaKnown RBP34■■■■□ 3.03
U2AF1-203ENST00000398137 SIK1P57059 783 aa34■■■■□ 3.03
U2AF1-203ENST00000398137 DIEXFQ68CQ4 756 aaKnown RBP33.99■■■■□ 3.03
U2AF1-203ENST00000398137 ZNF530Q6P9A1 599 aaPredicted RBP33.99■■■■□ 3.03
U2AF1-203ENST00000398137 ITPK1Q13572 414 aa33.98■■■■□ 3.03
U2AF1-203ENST00000398137 AMOTQ4VCS5 1084 aa33.98■■■■□ 3.03
U2AF1-203ENST00000398137 SMIM5Q71RC9 77 aa33.98■■■■□ 3.03
U2AF1-203ENST00000398137 LINC00116Q8NCU8 138 aa33.98■■■■□ 3.03
U2AF1-203ENST00000398137 DCAF5Q96JK2 942 aa33.98■■■■□ 3.03
U2AF1-203ENST00000398137 ERVV-2B6SEH9 535 aa33.97■■■■□ 3.03
U2AF1-203ENST00000398137 NUDCQ9Y266 331 aa33.97■■■■□ 3.03
U2AF1-203ENST00000398137 HMOX1P09601 288 aa33.94■■■■□ 3.02
U2AF1-203ENST00000398137 SLC4A9Q96Q91 983 aa33.94■■■■□ 3.02
U2AF1-203ENST00000398137 MSH5O43196 834 aa33.93■■■■□ 3.02
U2AF1-203ENST00000398137 HSP90AB1P08238 724 aaKnown RBP33.93■■■■□ 3.02
U2AF1-203ENST00000398137 POLD1P28340 1107 aa33.93■■■■□ 3.02
U2AF1-203ENST00000398137 ZNF831Q5JPB2 1677 aa33.93■■■■□ 3.02
U2AF1-203ENST00000398137 SCN11AQ9UI33 1791 aa33.93■■■■□ 3.02
U2AF1-203ENST00000398137 MSL1Q68DK7 614 aa33.92■■■■□ 3.02
U2AF1-203ENST00000398137 U2AF1L5P0DN76 240 aaPredicted RBP33.91■■■■□ 3.02
U2AF1-203ENST00000398137 U2AF1Q01081 240 aaKnown RBP eCLIP33.91■■■■□ 3.02
U2AF1-203ENST00000398137 AK7Q96M32 723 aa33.91■■■■□ 3.02
U2AF1-203ENST00000398137 CCDC184Q52MB2 194 aa33.9■■■■□ 3.02
U2AF1-203ENST00000398137 HMGB2P26583 209 aaKnown RBP33.89■■■■□ 3.02
U2AF1-203ENST00000398137 ATP6V1AP38606 617 aa33.89■■■■□ 3.02
U2AF1-203ENST00000398137 COL5A3P25940 1745 aaPredicted RBP33.88■■■■□ 3.01
U2AF1-203ENST00000398137 FLAD1Q8NFF5 587 aa33.88■■■■□ 3.01
U2AF1-203ENST00000398137 DCAF8L1A6NGE4 600 aa33.87■■■■□ 3.01
U2AF1-203ENST00000398137 VIRMAQ69YN4 1812 aaKnown RBP33.86■■■■□ 3.01
U2AF1-203ENST00000398137 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP33.86■■■■□ 3.01
U2AF1-203ENST00000398137 YY1P25490 414 aa33.86■■■■□ 3.01
U2AF1-203ENST00000398137 C1orf141Q5JVX7 400 aa33.86■■■■□ 3.01
U2AF1-203ENST00000398137 PHF14O94880 888 aa33.85■■■■□ 3.01
U2AF1-203ENST00000398137 CABP4P57796 275 aa33.85■■■■□ 3.01
U2AF1-203ENST00000398137 NLGN2Q8NFZ4 835 aa33.85■■■■□ 3.01
U2AF1-203ENST00000398137 SSFA2P28290 1259 aa33.83■■■■□ 3.01
U2AF1-203ENST00000398137 KLHL34Q8N239 644 aa33.83■■■■□ 3.01
U2AF1-203ENST00000398137 NFATC2IPQ8NCF5 419 aa33.83■■■■□ 3.01
U2AF1-203ENST00000398137 MRS2Q9HD23 443 aa33.83■■■■□ 3.01
U2AF1-203ENST00000398137 GOLGB1Q14789 3259 aaKnown RBP33.82■■■■□ 3.01
U2AF1-203ENST00000398137 RSPH6AQ9H0K4 717 aa33.82■■■■□ 3
U2AF1-203ENST00000398137 ADAMTS7Q9UKP4 1686 aa33.82■■■■□ 3
U2AF1-203ENST00000398137 AKAP4Q5JQC9 854 aa33.81■■■■□ 3
U2AF1-203ENST00000398137 RBM42Q9BTD8 480 aaKnown RBP33.81■■■■□ 3
U2AF1-203ENST00000398137 MYH14Q7Z406 1995 aaKnown RBP33.81■■■■□ 3
U2AF1-203ENST00000398137 GNPATO15228 680 aa33.8■■■■□ 3
U2AF1-203ENST00000398137 WDR43Q15061 677 aaKnown RBP eCLIP33.8■■■■□ 3
U2AF1-203ENST00000398137 LGR6Q9HBX8 967 aa33.8■■■■□ 3
U2AF1-203ENST00000398137 PRKAR2BP31323 418 aa33.79■■■■□ 3
U2AF1-203ENST00000398137 MTHFSDQ2M296 383 aaKnown RBP33.79■■■■□ 3
U2AF1-203ENST00000398137 MRC1P22897 1456 aa33.79■■■■□ 3
U2AF1-203ENST00000398137 TJP1Q07157 1748 aa33.78■■■■□ 3
U2AF1-203ENST00000398137 CICQ96RK0 1608 aaPredicted RBP33.77■■■■□ 3
U2AF1-203ENST00000398137 FCHSD2O94868 740 aa33.76■■■□□ 2.99
U2AF1-203ENST00000398137 CHD4Q14839 1912 aa33.75■■■□□ 2.99
U2AF1-203ENST00000398137 RNMTO43148 476 aaKnown RBP33.73■■■□□ 2.99
U2AF1-203ENST00000398137 PTCD1O75127 700 aaKnown RBP33.73■■■□□ 2.99
U2AF1-203ENST00000398137 CNTNAP4Q9C0A0 1308 aa33.73■■■□□ 2.99
U2AF1-203ENST00000398137 RC3H1Q5TC82 1133 aaKnown RBP33.72■■■□□ 2.99
U2AF1-203ENST00000398137 MIER1Q8N108 512 aa33.72■■■□□ 2.99
U2AF1-203ENST00000398137 SLC52A2Q9HAB3 445 aa33.72■■■□□ 2.99
U2AF1-203ENST00000398137 C4AP0C0L4 1744 aa33.7■■■□□ 2.99
U2AF1-203ENST00000398137 ADAMTS8Q9UP79 889 aa33.7■■■□□ 2.99
U2AF1-203ENST00000398137 GPR162Q16538 588 aa33.69■■■□□ 2.98
U2AF1-203ENST00000398137 PHACTR3Q96KR7 559 aa33.69■■■□□ 2.98
U2AF1-203ENST00000398137 RTCBQ9Y3I0 505 aaKnown RBP33.68■■■□□ 2.98
U2AF1-203ENST00000398137 CD2APQ9Y5K6 639 aa33.68■■■□□ 2.98
U2AF1-203ENST00000398137 PNISRQ8TF01 805 aaKnown RBP33.67■■■□□ 2.98
U2AF1-203ENST00000398137 KCPQ6ZWJ8 1503 aa33.67■■■□□ 2.98
U2AF1-203ENST00000398137 RPS6KA4O75676 772 aa33.66■■■□□ 2.98
U2AF1-203ENST00000398137 YBX3P16989 372 aaKnown RBP eCLIP33.66■■■□□ 2.98
U2AF1-203ENST00000398137 ARHGEF1Q92888 912 aaKnown RBP33.66■■■□□ 2.98
U2AF1-203ENST00000398137 PLEKHF1Q96S99 279 aa33.66■■■□□ 2.98
U2AF1-203ENST00000398137 SLC39A6Q13433 755 aa33.65■■■□□ 2.98
U2AF1-203ENST00000398137 TRAPPC3LQ5T215 181 aa33.65■■■□□ 2.98
U2AF1-203ENST00000398137 CCDC146Q8IYE0 955 aa33.65■■■□□ 2.98
U2AF1-203ENST00000398137 CCER2I3L3R5 266 aa33.64■■■□□ 2.98
U2AF1-203ENST00000398137 PNNQ9H307 717 aaKnown RBP33.64■■■□□ 2.98
U2AF1-203ENST00000398137 UBR2Q8IWV8 1755 aa33.63■■■□□ 2.97
U2AF1-203ENST00000398137 MAPK8IP3Q9UPT6 1336 aa33.63■■■□□ 2.97
U2AF1-203ENST00000398137 NEFMP07197 916 aa33.63■■■□□ 2.97
U2AF1-203ENST00000398137 CRKLP46109 303 aaKnown RBP33.63■■■□□ 2.97
U2AF1-203ENST00000398137 PELP1Q8IZL8 1130 aaKnown RBP33.62■■■□□ 2.97
U2AF1-203ENST00000398137 GAS2L2Q8NHY3 880 aa33.62■■■□□ 2.97
U2AF1-203ENST00000398137 SIPA1L3O60292 1781 aaPredicted RBP33.62■■■□□ 2.97
U2AF1-203ENST00000398137 ADRA2BP18089 450 aa33.61■■■□□ 2.97
U2AF1-203ENST00000398137 INTS5Q6P9B9 1019 aaKnown RBP33.6■■■□□ 2.97
U2AF1-203ENST00000398137 DNAJC10Q8IXB1 793 aa33.6■■■□□ 2.97
U2AF1-203ENST00000398137 KIF13BQ9NQT8 1826 aa33.59■■■□□ 2.97
U2AF1-203ENST00000398137 MMP10P09238 476 aa33.59■■■□□ 2.97
U2AF1-203ENST00000398137 GYS1P13807 737 aa33.59■■■□□ 2.97
U2AF1-203ENST00000398137 IL17REQ8NFR9 667 aa33.59■■■□□ 2.97
U2AF1-203ENST00000398137 KIAA1551Q9HCM1 1747 aa33.58■■■□□ 2.97
U2AF1-203ENST00000398137 ZNF784Q8NCA9 323 aaPredicted RBP33.57■■■□□ 2.96
U2AF1-203ENST00000398137 FAM9BQ8IZU0 186 aa33.56■■■□□ 2.96
U2AF1-203ENST00000398137 RUNDC1Q96C34 613 aa33.56■■■□□ 2.96
U2AF1-203ENST00000398137 RFC4P35249 363 aa33.54■■■□□ 2.96
U2AF1-203ENST00000398137 GNAT3A8MTJ3 354 aa33.53■■■□□ 2.96
U2AF1-203ENST00000398137 CYP19A1P11511 503 aaPredicted RBP33.53■■■□□ 2.96
U2AF1-203ENST00000398137 NLGN1Q8N2Q7 840 aa33.53■■■□□ 2.96
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms