RNA–Protein interactions for RNA: ENST00000397938.6

EWSR1-206, Transcript of EWS RNA binding protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene EWSR1, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-206ENST00000397938 MYRIPQ8NFW9 859 aa21.02■□□□□ 0.96
EWSR1-206ENST00000397938 SLC4A2P04920 1241 aa21.02■□□□□ 0.96
EWSR1-206ENST00000397938 TSHZ3Q63HK5 1081 aa21.02■□□□□ 0.96
EWSR1-206ENST00000397938 WASLO00401 505 aaPredicted RBP21.01■□□□□ 0.95
EWSR1-206ENST00000397938 NOL8Q76FK4 1167 aaKnown RBP21.01■□□□□ 0.95
EWSR1-206ENST00000397938 CHMLP26374 656 aa21.01■□□□□ 0.95
EWSR1-206ENST00000397938 CCT4P50991 539 aaKnown RBP21.01■□□□□ 0.95
EWSR1-206ENST00000397938 SULT6B1Q6IMI4 303 aa21.01■□□□□ 0.95
EWSR1-206ENST00000397938 AKAP12Q02952 1782 aa21.01■□□□□ 0.95
EWSR1-206ENST00000397938 WDR33Q9C0J8 1336 aaKnown RBP21.01■□□□□ 0.95
EWSR1-206ENST00000397938 ANO2Q9NQ90 1003 aa21.01■□□□□ 0.95
EWSR1-206ENST00000397938 EXOC6BQ9Y2D4 811 aa21.01■□□□□ 0.95
EWSR1-206ENST00000397938 USP48Q86UV5 1035 aa21■□□□□ 0.95
EWSR1-206ENST00000397938 PIBF1Q8WXW3 757 aa21■□□□□ 0.95
EWSR1-206ENST00000397938 GDPD2Q9HCC8 539 aa21■□□□□ 0.95
EWSR1-206ENST00000397938 MX1P20591 662 aa21■□□□□ 0.95
EWSR1-206ENST00000397938 EIF4A2Q14240 407 aaKnown RBP21■□□□□ 0.95
EWSR1-206ENST00000397938 FBXO31Q5XUX0 539 aaPredicted RBP21■□□□□ 0.95
EWSR1-206ENST00000397938 CRB1P82279 1406 aa20.99■□□□□ 0.95
EWSR1-206ENST00000397938 TMEM87AQ8NBN3 555 aa20.99■□□□□ 0.95
EWSR1-206ENST00000397938 GNAI2P04899 355 aa20.99■□□□□ 0.95
EWSR1-206ENST00000397938 ITSN1Q15811 1721 aa20.99■□□□□ 0.95
EWSR1-206ENST00000397938 PRIMPOLQ96LW4 560 aa20.99■□□□□ 0.95
EWSR1-206ENST00000397938 LRRCC1Q9C099 1032 aa20.99■□□□□ 0.95
EWSR1-206ENST00000397938 SLC4A10Q6U841 1118 aa20.98■□□□□ 0.95
EWSR1-206ENST00000397938 TCHHQ07283 1943 aa20.98■□□□□ 0.95
EWSR1-206ENST00000397938 F6X3S4 739 aa20.98■□□□□ 0.95
EWSR1-206ENST00000397938 FOXD4L6Q3SYB3 417 aaPredicted RBP20.98■□□□□ 0.95
EWSR1-206ENST00000397938 FOXD4L3Q6VB84 417 aaPredicted RBP20.98■□□□□ 0.95
EWSR1-206ENST00000397938 G2E3Q7L622 706 aa20.98■□□□□ 0.95
EWSR1-206ENST00000397938 STAG3Q9UJ98 1225 aa20.98■□□□□ 0.95
EWSR1-206ENST00000397938 DNTTIP2Q5QJE6 756 aaKnown RBP20.97■□□□□ 0.95
EWSR1-206ENST00000397938 ARID3AQ99856 593 aa20.97■□□□□ 0.95
EWSR1-206ENST00000397938 CCDC94Q9BW85 323 aaPredicted RBP20.97■□□□□ 0.95
EWSR1-206ENST00000397938 CCDC183Q5T5S1 534 aa20.97■□□□□ 0.95
EWSR1-206ENST00000397938 UPF3BQ9BZI7 483 aaKnown RBP20.97■□□□□ 0.95
EWSR1-206ENST00000397938 USP25Q9UHP3 1055 aa20.97■□□□□ 0.95
EWSR1-206ENST00000397938 RPAP1Q9BWH6 1393 aaPredicted RBP20.96■□□□□ 0.95
EWSR1-206ENST00000397938 RILPL2Q969X0 211 aa20.96■□□□□ 0.95
EWSR1-206ENST00000397938 NUDT16Q96DE0 195 aaKnown RBP20.96■□□□□ 0.95
EWSR1-206ENST00000397938 STAP2Q9UGK3 403 aa20.96■□□□□ 0.95
EWSR1-206ENST00000397938 RGPD1P0DJD0 1748 aa20.95■□□□□ 0.95
EWSR1-206ENST00000397938 TRIM6-TRIM34B2RNG4 842 aa20.95■□□□□ 0.94
EWSR1-206ENST00000397938 HMGN5P82970 282 aaKnown RBP20.95■□□□□ 0.94
EWSR1-206ENST00000397938 NOLC1Q14978 699 aaKnown RBP eCLIP20.95■□□□□ 0.94
EWSR1-206ENST00000397938 PLEKHG5O94827 1062 aa20.95■□□□□ 0.94
EWSR1-206ENST00000397938 GTF2F1P35269 517 aaKnown RBP eCLIP20.95■□□□□ 0.94
EWSR1-206ENST00000397938 SRCIN1Q9C0H9 1055 aa20.95■□□□□ 0.94
EWSR1-206ENST00000397938 EPB41L2O43491 1005 aaKnown RBP20.94■□□□□ 0.94
EWSR1-206ENST00000397938 ZNF830Q96NB3 372 aaPredicted RBP20.94■□□□□ 0.94
EWSR1-206ENST00000397938 ARHGEF10O15013 1369 aa20.94■□□□□ 0.94
EWSR1-206ENST00000397938 ADCY5O95622 1261 aa20.94■□□□□ 0.94
EWSR1-206ENST00000397938 NCKAP5LQ9HCH0 1330 aa20.94■□□□□ 0.94
EWSR1-206ENST00000397938 A2ML1A8K2U0 1454 aa20.93■□□□□ 0.94
EWSR1-206ENST00000397938 CCDC61Q9Y6R9 512 aa20.93■□□□□ 0.94
EWSR1-206ENST00000397938 LETM1O95202 739 aaPredicted RBP20.93■□□□□ 0.94
EWSR1-206ENST00000397938 MPNDQ8N594 471 aa20.92■□□□□ 0.94
EWSR1-206ENST00000397938 SPTLC3Q9NUV7 552 aa20.92■□□□□ 0.94
EWSR1-206ENST00000397938 PNMA6EA0A0J9YXQ4 647 aa20.92■□□□□ 0.94
EWSR1-206ENST00000397938 HSPA4P34932 840 aa20.92■□□□□ 0.94
EWSR1-206ENST00000397938 UNC5CLQ8IV45 518 aa20.92■□□□□ 0.94
EWSR1-206ENST00000397938 TTC12Q9H892 705 aaPredicted RBP20.92■□□□□ 0.94
EWSR1-206ENST00000397938 ZNF710Q8N1W2 664 aa20.91■□□□□ 0.94
EWSR1-206ENST00000397938 AOX1Q06278 1338 aa20.91■□□□□ 0.94
EWSR1-206ENST00000397938 ZBTB7CA1YPR0 619 aa20.91■□□□□ 0.94
EWSR1-206ENST00000397938 ATP8B2P98198 1209 aa20.91■□□□□ 0.94
EWSR1-206ENST00000397938 MIS18AQ9NYP9 233 aa20.91■□□□□ 0.94
EWSR1-206ENST00000397938 NRXN3Q9Y4C0 1643 aa20.91■□□□□ 0.94
EWSR1-206ENST00000397938 GNAI3P08754 354 aa20.91■□□□□ 0.94
EWSR1-206ENST00000397938 HCLS1P14317 486 aaPredicted RBP20.91■□□□□ 0.94
EWSR1-206ENST00000397938 FKBP5Q13451 457 aaPredicted RBP20.91■□□□□ 0.94
EWSR1-206ENST00000397938 XRN1Q8IZH2 1706 aaKnown RBP20.91■□□□□ 0.94
EWSR1-206ENST00000397938 CNPY2Q9Y2B0 182 aa20.91■□□□□ 0.94
EWSR1-206ENST00000397938 PEAK1Q9H792 1746 aa20.9■□□□□ 0.94
EWSR1-206ENST00000397938 JARID2Q92833 1246 aaPredicted RBP20.9■□□□□ 0.94
EWSR1-206ENST00000397938 IL25Q9H293 177 aa20.9■□□□□ 0.94
EWSR1-206ENST00000397938 UBE2HP62256 183 aa20.9■□□□□ 0.94
EWSR1-206ENST00000397938 TSPYL4Q9UJ04 414 aa20.9■□□□□ 0.94
EWSR1-206ENST00000397938 ZSCAN22P10073 491 aaPredicted RBP20.89■□□□□ 0.93
EWSR1-206ENST00000397938 SPATA31D1Q6ZQQ2 1576 aa20.89■□□□□ 0.93
EWSR1-206ENST00000397938 FAM208AQ9UK61 1670 aaKnown RBP20.89■□□□□ 0.93
EWSR1-206ENST00000397938 C17orf53Q8N3J3 647 aaPredicted RBP20.89■□□□□ 0.93
EWSR1-206ENST00000397938 TSC1Q92574 1164 aa20.88■□□□□ 0.93
EWSR1-206ENST00000397938 N4BP2Q86UW6 1770 aaPredicted RBP20.88■□□□□ 0.93
EWSR1-206ENST00000397938 KDM4AO75164 1064 aa20.88■□□□□ 0.93
EWSR1-206ENST00000397938 OVOS2A0A0J9YW53 1432 aa20.88■□□□□ 0.93
EWSR1-206ENST00000397938 OVOS2Q6IE36 1432 aa20.88■□□□□ 0.93
EWSR1-206ENST00000397938 KLHL34Q8N239 644 aa20.87■□□□□ 0.93
EWSR1-206ENST00000397938 PRDM10Q9NQV6 1147 aa20.87■□□□□ 0.93
EWSR1-206ENST00000397938 RAD50Q92878 1312 aa20.86■□□□□ 0.93
EWSR1-206ENST00000397938 NALCNQ8IZF0 1738 aa20.86■□□□□ 0.93
EWSR1-206ENST00000397938 TTC14Q96N46 770 aa20.86■□□□□ 0.93
EWSR1-206ENST00000397938 FUCA2Q9BTY2 467 aa20.86■□□□□ 0.93
EWSR1-206ENST00000397938 STK31Q9BXU1 1019 aa20.86■□□□□ 0.93
EWSR1-206ENST00000397938 METP08581 1390 aa20.86■□□□□ 0.93
EWSR1-206ENST00000397938 KIF3AQ9Y496 699 aa20.86■□□□□ 0.93
EWSR1-206ENST00000397938 FLIIQ13045 1269 aa20.85■□□□□ 0.93
EWSR1-206ENST00000397938 HSP90AB2PQ58FF8 381 aa20.85■□□□□ 0.93
EWSR1-206ENST00000397938 UTP14CQ5TAP6 766 aaKnown RBP20.85■□□□□ 0.93
EWSR1-206ENST00000397938 TXNDC2Q86VQ3 553 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 184 ms