RNA–Protein interactions for RNA: ENST00000397876.6

SNRNP25-203, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 25, humanhuman

TSL 3

Gene SNRNP25, Length 831 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP25-203ENST00000397876 ERVV-2B6SEH9 535 aa19.49■□□□□ 0.71
SNRNP25-203ENST00000397876 ITPK1Q13572 414 aa19.49■□□□□ 0.71
SNRNP25-203ENST00000397876 AMIGO3Q86WK7 504 aa19.49■□□□□ 0.71
SNRNP25-203ENST00000397876 CD2APQ9Y5K6 639 aa19.49■□□□□ 0.71
SNRNP25-203ENST00000397876 KDRP35968 1356 aa19.48■□□□□ 0.71
SNRNP25-203ENST00000397876 GNPATO15228 680 aa19.48■□□□□ 0.71
SNRNP25-203ENST00000397876 ZNF831Q5JPB2 1677 aa19.47■□□□□ 0.71
SNRNP25-203ENST00000397876 GRIN3BO60391 1043 aa19.47■□□□□ 0.71
SNRNP25-203ENST00000397876 C1orf141Q5JVX7 400 aa19.47■□□□□ 0.71
SNRNP25-203ENST00000397876 AEBP1Q8IUX7 1158 aa19.47■□□□□ 0.71
SNRNP25-203ENST00000397876 KDM6AO15550 1401 aaPredicted RBP19.47■□□□□ 0.71
SNRNP25-203ENST00000397876 KIF7Q2M1P5 1343 aa19.47■□□□□ 0.71
SNRNP25-203ENST00000397876 SMIM5Q71RC9 77 aa19.46■□□□□ 0.71
SNRNP25-203ENST00000397876 YBX3P16989 372 aaKnown RBP eCLIP19.45■□□□□ 0.78e-7■□□□□ 9.9
SNRNP25-203ENST00000397876 CABP4P57796 275 aa19.45■□□□□ 0.7
SNRNP25-203ENST00000397876 AMER1Q5JTC6 1135 aaPredicted RBP19.45■□□□□ 0.7
SNRNP25-203ENST00000397876 SULT6B1Q6IMI4 303 aa19.45■□□□□ 0.7
SNRNP25-203ENST00000397876 RBM42Q9BTD8 480 aaKnown RBP19.45■□□□□ 0.7
SNRNP25-203ENST00000397876 IL13P35225 146 aa19.43■□□□□ 0.7
SNRNP25-203ENST00000397876 MTHFSP49914 203 aa19.43■□□□□ 0.7
SNRNP25-203ENST00000397876 COL5A3P25940 1745 aaPredicted RBP19.42■□□□□ 0.7
SNRNP25-203ENST00000397876 RTCBQ9Y3I0 505 aaKnown RBP19.42■□□□□ 0.7
SNRNP25-203ENST00000397876 GOLGB1Q14789 3259 aaKnown RBP19.42■□□□□ 0.7
SNRNP25-203ENST00000397876 SLC4A9Q96Q91 983 aa19.41■□□□□ 0.7
SNRNP25-203ENST00000397876 CNTNAP4Q9C0A0 1308 aa19.4■□□□□ 0.7
SNRNP25-203ENST00000397876 ADRA2BP18089 450 aa19.39■□□□□ 0.69
SNRNP25-203ENST00000397876 TRAPPC3LQ5T215 181 aa19.39■□□□□ 0.69
SNRNP25-203ENST00000397876 RC3H1Q5TC82 1133 aaKnown RBP19.39■□□□□ 0.69
SNRNP25-203ENST00000397876 SCN11AQ9UI33 1791 aa19.38■□□□□ 0.69
SNRNP25-203ENST00000397876 PTCD1O75127 700 aaKnown RBP19.37■□□□□ 0.69
SNRNP25-203ENST00000397876 MMP10P09238 476 aa19.37■□□□□ 0.69
SNRNP25-203ENST00000397876 NFATC2IPQ8NCF5 419 aa19.37■□□□□ 0.69
SNRNP25-203ENST00000397876 GIGYF1O75420 1035 aaPredicted RBP19.36■□□□□ 0.69
SNRNP25-203ENST00000397876 AKAP4Q5JQC9 854 aa19.36■□□□□ 0.69
SNRNP25-203ENST00000397876 CC2D1BQ5T0F9 858 aaKnown RBP19.36■□□□□ 0.69
SNRNP25-203ENST00000397876 NLGN1Q8N2Q7 840 aa19.36■□□□□ 0.69
SNRNP25-203ENST00000397876 CICQ96RK0 1608 aaPredicted RBP19.36■□□□□ 0.69
SNRNP25-203ENST00000397876 PER1O15534 1290 aaPredicted RBP19.35■□□□□ 0.69
SNRNP25-203ENST00000397876 RPS6KA4O75676 772 aa19.35■□□□□ 0.69
SNRNP25-203ENST00000397876 RFC4P35249 363 aa19.35■□□□□ 0.69
SNRNP25-203ENST00000397876 C1QTNF8P60827 252 aa19.35■□□□□ 0.69
SNRNP25-203ENST00000397876 C4AP0C0L4 1744 aa19.34■□□□□ 0.69
SNRNP25-203ENST00000397876 TJP1Q07157 1748 aa19.34■□□□□ 0.69
SNRNP25-203ENST00000397876 HMOX1P09601 288 aa19.34■□□□□ 0.69
SNRNP25-203ENST00000397876 ARHGEF1Q92888 912 aaKnown RBP19.34■□□□□ 0.69
SNRNP25-203ENST00000397876 DIAPH1O60610 1272 aaKnown RBP19.33■□□□□ 0.68
SNRNP25-203ENST00000397876 WWC3Q9ULE0 1092 aa19.33■□□□□ 0.68
SNRNP25-203ENST00000397876 MRC1P22897 1456 aa19.33■□□□□ 0.68
SNRNP25-203ENST00000397876 ATP10DQ9P241 1426 aa19.33■□□□□ 0.68
SNRNP25-203ENST00000397876 NPC1L1Q9UHC9 1359 aa19.32■□□□□ 0.68
SNRNP25-203ENST00000397876 KIF13BQ9NQT8 1826 aa19.32■□□□□ 0.68
SNRNP25-203ENST00000397876 MYH14Q7Z406 1995 aaKnown RBP19.32■□□□□ 0.68
SNRNP25-203ENST00000397876 CRKLP46109 303 aaKnown RBP19.32■□□□□ 0.68
SNRNP25-203ENST00000397876 SLC52A2Q9HAB3 445 aa19.32■□□□□ 0.68
SNRNP25-203ENST00000397876 C10orf71Q711Q0 1435 aa19.32■□□□□ 0.68
SNRNP25-203ENST00000397876 PXDNLA1KZ92 1463 aa19.31■□□□□ 0.68
SNRNP25-203ENST00000397876 GYS1P13807 737 aa19.31■□□□□ 0.68
SNRNP25-203ENST00000397876 SENP3-EIF4A1A0A087X0R7 540 aa19.3■□□□□ 0.68
SNRNP25-203ENST00000397876 CCDC87Q9NVE4 849 aa19.3■□□□□ 0.68
SNRNP25-203ENST00000397876 KIAA1551Q9HCM1 1747 aa19.29■□□□□ 0.68
SNRNP25-203ENST00000397876 RNMTO43148 476 aaKnown RBP19.29■□□□□ 0.68
SNRNP25-203ENST00000397876 TGFB2P61812 414 aa19.29■□□□□ 0.68
SNRNP25-203ENST00000397876 PARP3Q9Y6F1 533 aa19.29■□□□□ 0.68
SNRNP25-203ENST00000397876 VIRMAQ69YN4 1812 aaKnown RBP19.29■□□□□ 0.68
SNRNP25-203ENST00000397876 ADCY9O60503 1353 aa19.29■□□□□ 0.68
SNRNP25-203ENST00000397876 COL3A1P02461 1466 aaPredicted RBP19.28■□□□□ 0.68
SNRNP25-203ENST00000397876 ADAMTS7Q9UKP4 1686 aa19.28■□□□□ 0.68
SNRNP25-203ENST00000397876 CNGB1Q14028 1251 aaPredicted RBP19.28■□□□□ 0.68
SNRNP25-203ENST00000397876 LGR6Q9HBX8 967 aa19.28■□□□□ 0.68
SNRNP25-203ENST00000397876 USP42Q9H9J4 1324 aaKnown RBP19.27■□□□□ 0.68
SNRNP25-203ENST00000397876 MTHFSDQ2M296 383 aaKnown RBP19.27■□□□□ 0.68
SNRNP25-203ENST00000397876 N4BP2Q86UW6 1770 aaPredicted RBP19.27■□□□□ 0.67
SNRNP25-203ENST00000397876 DNAJC10Q8IXB1 793 aa19.26■□□□□ 0.67
SNRNP25-203ENST00000397876 SRP68Q9UHB9 627 aaKnown RBP19.26■□□□□ 0.67
SNRNP25-203ENST00000397876 KCPQ6ZWJ8 1503 aa19.25■□□□□ 0.67
SNRNP25-203ENST00000397876 U2SURPO15042 1029 aaKnown RBP19.25■□□□□ 0.67
SNRNP25-203ENST00000397876 INTS5Q6P9B9 1019 aaKnown RBP19.25■□□□□ 0.67
SNRNP25-203ENST00000397876 GPBP1L1Q9HC44 474 aaPredicted RBP19.25■□□□□ 0.67
SNRNP25-203ENST00000397876 A0A0G2JLW4 131 aa19.24■□□□□ 0.67
SNRNP25-203ENST00000397876 SLC39A6Q13433 755 aa19.24■□□□□ 0.67
SNRNP25-203ENST00000397876 BCS1LQ9Y276 419 aa19.24■□□□□ 0.67
SNRNP25-203ENST00000397876 FKBP8Q14318 412 aa19.23■□□□□ 0.67
SNRNP25-203ENST00000397876 ZPR1O75312 459 aa19.22■□□□□ 0.67
SNRNP25-203ENST00000397876 DPEP1P16444 411 aa19.22■□□□□ 0.67
SNRNP25-203ENST00000397876 GAS2L2Q8NHY3 880 aa19.22■□□□□ 0.67
SNRNP25-203ENST00000397876 ZNF526Q8TF50 670 aaPredicted RBP19.22■□□□□ 0.67
SNRNP25-203ENST00000397876 SOS1Q07889 1333 aaPredicted RBP19.22■□□□□ 0.67
SNRNP25-203ENST00000397876 UBR2Q8IWV8 1755 aa19.21■□□□□ 0.67
SNRNP25-203ENST00000397876 CYP19A1P11511 503 aaPredicted RBP19.21■□□□□ 0.67
SNRNP25-203ENST00000397876 TTC5Q8N0Z6 440 aa19.21■□□□□ 0.67
SNRNP25-203ENST00000397876 VSIG10Q8N0Z9 540 aa19.21■□□□□ 0.67
SNRNP25-203ENST00000397876 COL15A1P39059 1388 aa19.2■□□□□ 0.66
SNRNP25-203ENST00000397876 BRCA1P38398 1863 aaKnown RBP19.2■□□□□ 0.66
SNRNP25-203ENST00000397876 DDR1Q08345 913 aa19.2■□□□□ 0.66
SNRNP25-203ENST00000397876 CFAP53Q96M91 514 aa19.2■□□□□ 0.66
SNRNP25-203ENST00000397876 FCHSD2O94868 740 aa19.19■□□□□ 0.66
SNRNP25-203ENST00000397876 TEFQ10587 303 aa19.19■□□□□ 0.66
SNRNP25-203ENST00000397876 USPL1Q5W0Q7 1092 aa19.19■□□□□ 0.66
SNRNP25-203ENST00000397876 ZBTB1Q9Y2K1 713 aa19.19■□□□□ 0.66
SNRNP25-203ENST00000397876 GNAT3A8MTJ3 354 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms