RNA–Protein interactions for RNA: ENST00000396832.5

CSNK1E-203, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-203ENST00000396832 REC8O95072 547 aa29.16■■■□□ 2.26
CSNK1E-203ENST00000396832 MYRIPQ8NFW9 859 aa29.16■■■□□ 2.26
CSNK1E-203ENST00000396832 GDPD2Q9HCC8 539 aa29.16■■■□□ 2.26
CSNK1E-203ENST00000396832 METP08581 1390 aa29.15■■■□□ 2.26
CSNK1E-203ENST00000396832 RILPL2Q969X0 211 aa29.15■■■□□ 2.26
CSNK1E-203ENST00000396832 TSPY26PQ9H489 355 aa29.15■■■□□ 2.26
CSNK1E-203ENST00000396832 ZHX1Q9UKY1 873 aaPredicted RBP29.15■■■□□ 2.26
CSNK1E-203ENST00000396832 PALD1Q9ULE6 856 aa29.15■■■□□ 2.26
CSNK1E-203ENST00000396832 JARID2Q92833 1246 aaPredicted RBP29.15■■■□□ 2.26
CSNK1E-203ENST00000396832 CPSF1Q10570 1443 aaKnown RBP29.15■■■□□ 2.26
CSNK1E-203ENST00000396832 PDE1AP54750 535 aa29.13■■■□□ 2.25
CSNK1E-203ENST00000396832 TRIM6-TRIM34B2RNG4 842 aa29.13■■■□□ 2.25
CSNK1E-203ENST00000396832 TMX3Q96JJ7 454 aa29.13■■■□□ 2.25
CSNK1E-203ENST00000396832 UPF3BQ9BZI7 483 aaKnown RBP29.13■■■□□ 2.25
CSNK1E-203ENST00000396832 CHL1O00533 1208 aa29.12■■■□□ 2.25
CSNK1E-203ENST00000396832 PLPPR3Q6T4P5 718 aa29.12■■■□□ 2.25
CSNK1E-203ENST00000396832 ANO2Q9NQ90 1003 aa29.12■■■□□ 2.25
CSNK1E-203ENST00000396832 CCDC61Q9Y6R9 512 aa29.12■■■□□ 2.25
CSNK1E-203ENST00000396832 DTNBO60941 627 aa29.12■■■□□ 2.25
CSNK1E-203ENST00000396832 RICTORQ6R327 1708 aa29.11■■■□□ 2.25
CSNK1E-203ENST00000396832 TSC1Q92574 1164 aa29.11■■■□□ 2.25
CSNK1E-203ENST00000396832 DMTNQ08495 405 aa29.1■■■□□ 2.25
CSNK1E-203ENST00000396832 PRR36Q9H6K5 1346 aa29.1■■■□□ 2.25
CSNK1E-203ENST00000396832 TSPYL4Q9UJ04 414 aa29.09■■■□□ 2.25
CSNK1E-203ENST00000396832 ZNF830Q96NB3 372 aaPredicted RBP29.08■■■□□ 2.25
CSNK1E-203ENST00000396832 ZSCAN20P17040 1043 aaPredicted RBP29.07■■■□□ 2.24
CSNK1E-203ENST00000396832 UTP14CQ5TAP6 766 aaKnown RBP29.07■■■□□ 2.24
CSNK1E-203ENST00000396832 AATKQ6ZMQ8 1374 aa29.07■■■□□ 2.24
CSNK1E-203ENST00000396832 BRD1O95696 1058 aa29.07■■■□□ 2.24
CSNK1E-203ENST00000396832 DIP2BQ9P265 1576 aa29.07■■■□□ 2.24
CSNK1E-203ENST00000396832 MAP4K4O95819 1239 aaPredicted RBP29.07■■■□□ 2.24
CSNK1E-203ENST00000396832 PRIMPOLQ96LW4 560 aa29.07■■■□□ 2.24
CSNK1E-203ENST00000396832 PNMA6EA0A0J9YXQ4 647 aa29.06■■■□□ 2.24
CSNK1E-203ENST00000396832 HMMRO75330 724 aa29.06■■■□□ 2.24
CSNK1E-203ENST00000396832 ZNF710Q8N1W2 664 aa29.06■■■□□ 2.24
CSNK1E-203ENST00000396832 SYAP1Q96A49 352 aaPredicted RBP29.06■■■□□ 2.24
CSNK1E-203ENST00000396832 LARP6Q9BRS8 491 aaKnown RBP29.06■■■□□ 2.24
CSNK1E-203ENST00000396832 KIF24Q5T7B8 1368 aa29.06■■■□□ 2.24
CSNK1E-203ENST00000396832 UNC5CLQ8IV45 518 aa29.05■■■□□ 2.24
CSNK1E-203ENST00000396832 A2ML1A8K2U0 1454 aa29.04■■■□□ 2.24
CSNK1E-203ENST00000396832 PTPRCP08575 1304 aa29.04■■■□□ 2.24
CSNK1E-203ENST00000396832 NOLC1Q14978 699 aaKnown RBP eCLIP29.04■■■□□ 2.243e-6■■□□□ 12.8
CSNK1E-203ENST00000396832 PIBF1Q8WXW3 757 aa29.04■■■□□ 2.24
CSNK1E-203ENST00000396832 HMGN5P82970 282 aaKnown RBP29.03■■■□□ 2.24
CSNK1E-203ENST00000396832 IL1RAPL2Q9NP60 686 aa29.03■■■□□ 2.24
CSNK1E-203ENST00000396832 IL25Q9H293 177 aa29.02■■■□□ 2.24
CSNK1E-203ENST00000396832 RIMS1Q86UR5 1692 aaKnown RBP29.02■■■□□ 2.24
CSNK1E-203ENST00000396832 FKBP5Q13451 457 aaPredicted RBP29.02■■■□□ 2.24
CSNK1E-203ENST00000396832 ESYT1Q9BSJ8 1104 aa29.02■■■□□ 2.24
CSNK1E-203ENST00000396832 MTHFSDQ2M296 383 aaKnown RBP29.01■■■□□ 2.24
CSNK1E-203ENST00000396832 CBX1P83916 185 aa29.01■■■□□ 2.23
CSNK1E-203ENST00000396832 RTF1Q92541 710 aaKnown RBP29.01■■■□□ 2.23
CSNK1E-203ENST00000396832 GADD45BO75293 160 aaPredicted RBP29■■■□□ 2.23
CSNK1E-203ENST00000396832 MX1P20591 662 aa29■■■□□ 2.23
CSNK1E-203ENST00000396832 GTF2F1P35269 517 aaKnown RBP eCLIP29■■■□□ 2.232e-9■■■■■ 41.8
CSNK1E-203ENST00000396832 MAP3K19Q56UN5 1328 aa29■■■□□ 2.23
CSNK1E-203ENST00000396832 PHF14O94880 888 aa29■■■□□ 2.23
CSNK1E-203ENST00000396832 C17orf53Q8N3J3 647 aaPredicted RBP28.99■■■□□ 2.23
CSNK1E-203ENST00000396832 TTC12Q9H892 705 aaPredicted RBP28.99■■■□□ 2.23
CSNK1E-203ENST00000396832 GNAI2P04899 355 aa28.99■■■□□ 2.23
CSNK1E-203ENST00000396832 LRRCC1Q9C099 1032 aa28.99■■■□□ 2.23
CSNK1E-203ENST00000396832 USP25Q9UHP3 1055 aa28.99■■■□□ 2.23
CSNK1E-203ENST00000396832 ACEP12821 1306 aa28.98■■■□□ 2.23
CSNK1E-203ENST00000396832 FAM177BA6PVY3 158 aa28.98■■■□□ 2.23
CSNK1E-203ENST00000396832 TTC21BQ7Z4L5 1316 aa28.98■■■□□ 2.23
CSNK1E-203ENST00000396832 MCM2P49736 904 aa28.97■■■□□ 2.23
CSNK1E-203ENST00000396832 HAP1P54257 671 aaPredicted RBP28.97■■■□□ 2.23
CSNK1E-203ENST00000396832 CUL4AQ13619 759 aa28.97■■■□□ 2.23
CSNK1E-203ENST00000396832 UVSSAQ2YD98 709 aa28.97■■■□□ 2.23
CSNK1E-203ENST00000396832 NUTM1Q86Y26 1132 aa28.97■■■□□ 2.23
CSNK1E-203ENST00000396832 FAM184AQ8NB25 1140 aa28.96■■■□□ 2.23
CSNK1E-203ENST00000396832 DLC1Q96QB1 1528 aa28.96■■■□□ 2.23
CSNK1E-203ENST00000396832 PPP4R3BQ5MIZ7 849 aa28.96■■■□□ 2.23
CSNK1E-203ENST00000396832 KIF3AQ9Y496 699 aa28.96■■■□□ 2.23
CSNK1E-203ENST00000396832 LRRFIP2Q9Y608 721 aaKnown RBP28.96■■■□□ 2.23
CSNK1E-203ENST00000396832 A0A0U1RQG5 324 aaPredicted RBP28.96■■■□□ 2.23
CSNK1E-203ENST00000396832 ADCY5O95622 1261 aa28.95■■■□□ 2.22
CSNK1E-203ENST00000396832 CHMLP26374 656 aa28.95■■■□□ 2.22
CSNK1E-203ENST00000396832 USP48Q86UV5 1035 aa28.95■■■□□ 2.22
CSNK1E-203ENST00000396832 STK31Q9BXU1 1019 aa28.95■■■□□ 2.22
CSNK1E-203ENST00000396832 KIAA0232Q92628 1395 aa28.95■■■□□ 2.22
CSNK1E-203ENST00000396832 SETD1AO15047 1707 aaKnown RBP28.94■■■□□ 2.22
CSNK1E-203ENST00000396832 CRB1P82279 1406 aa28.94■■■□□ 2.22
CSNK1E-203ENST00000396832 TCHHQ07283 1943 aa28.94■■■□□ 2.22
CSNK1E-203ENST00000396832 MCCP23508 829 aa28.93■■■□□ 2.22
CSNK1E-203ENST00000396832 CCT4P50991 539 aaKnown RBP28.93■■■□□ 2.22
CSNK1E-203ENST00000396832 ATP2B3Q16720 1220 aa28.93■■■□□ 2.22
CSNK1E-203ENST00000396832 FLIIQ13045 1269 aa28.92■■■□□ 2.22
CSNK1E-203ENST00000396832 INTS4Q96HW7 963 aaKnown RBP28.92■■■□□ 2.22
CSNK1E-203ENST00000396832 MON2Q7Z3U7 1717 aa28.92■■■□□ 2.22
CSNK1E-203ENST00000396832 OSBPL3Q9H4L5 887 aa28.91■■■□□ 2.22
CSNK1E-203ENST00000396832 C3P01024 1663 aa28.91■■■□□ 2.22
CSNK1E-203ENST00000396832 PLEKHG5O94827 1062 aa28.91■■■□□ 2.22
CSNK1E-203ENST00000396832 NUTM2GQ5VZR2 741 aa28.91■■■□□ 2.22
CSNK1E-203ENST00000396832 GTPBP4Q9BZE4 634 aaKnown RBP28.91■■■□□ 2.22
CSNK1E-203ENST00000396832 SPTLC3Q9NUV7 552 aa28.9■■■□□ 2.22
CSNK1E-203ENST00000396832 ITSN1Q15811 1721 aa28.9■■■□□ 2.22
CSNK1E-203ENST00000396832 BCL2L12Q9HB09 334 aa28.89■■■□□ 2.22
CSNK1E-203ENST00000396832 ROBO2Q9HCK4 1378 aa28.89■■■□□ 2.21
CSNK1E-203ENST00000396832 PEAK1Q9H792 1746 aa28.88■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 1320.7 ms