RNA–Protein interactions for RNA: ENST00000396268.7

CCHCR1-203, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCHCR1, Length 2,958 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-203ENST00000396268 FLT4P35916 1363 aa17.31■□□□□ 0.36
CCHCR1-203ENST00000396268 KRT28Q7Z3Y7 464 aa17.31■□□□□ 0.36
CCHCR1-203ENST00000396268 USHBP1Q8N6Y0 703 aa17.31■□□□□ 0.36
CCHCR1-203ENST00000396268 ISY1Q9ULR0 285 aaKnown RBP17.31■□□□□ 0.36
CCHCR1-203ENST00000396268 KIAA1211Q6ZU35 1233 aa17.3■□□□□ 0.36
CCHCR1-203ENST00000396268 MST1RQ04912 1400 aa17.3■□□□□ 0.36
CCHCR1-203ENST00000396268 DCTPP1Q9H773 170 aa17.3■□□□□ 0.36
CCHCR1-203ENST00000396268 OTUD7AQ8TE49 926 aaPredicted RBP17.29■□□□□ 0.36
CCHCR1-203ENST00000396268 PTMSP20962 102 aa17.29■□□□□ 0.36
CCHCR1-203ENST00000396268 DDX49Q9Y6V7 483 aaKnown RBP17.29■□□□□ 0.36
CCHCR1-203ENST00000396268 TTC22Q5TAA0 569 aa17.28■□□□□ 0.36
CCHCR1-203ENST00000396268 DLG5Q8TDM6 1919 aa17.28■□□□□ 0.36
CCHCR1-203ENST00000396268 SMARCA5O60264 1052 aaPredicted RBP17.28■□□□□ 0.36
CCHCR1-203ENST00000396268 RABEP1Q15276 862 aa17.27■□□□□ 0.36
CCHCR1-203ENST00000396268 MCM10Q7L590 875 aa17.27■□□□□ 0.36
CCHCR1-203ENST00000396268 RGPD1P0DJD0 1748 aa17.27■□□□□ 0.35
CCHCR1-203ENST00000396268 XIRP1Q702N8 1843 aaKnown RBP17.27■□□□□ 0.35
CCHCR1-203ENST00000396268 CABLES1Q8TDN4 633 aa17.26■□□□□ 0.35
CCHCR1-203ENST00000396268 BAG4O95429 457 aaKnown RBP17.26■□□□□ 0.35
CCHCR1-203ENST00000396268 INTS3Q68E01 1043 aaKnown RBP17.26■□□□□ 0.35
CCHCR1-203ENST00000396268 GCP02774 474 aa17.25■□□□□ 0.35
CCHCR1-203ENST00000396268 ANKRD44Q8N8A2 993 aa17.25■□□□□ 0.35
CCHCR1-203ENST00000396268 LTN1O94822 1766 aa17.25■□□□□ 0.35
CCHCR1-203ENST00000396268 MCTP1Q6DN14 999 aa17.25■□□□□ 0.35
CCHCR1-203ENST00000396268 CASC1Q6TDU7 716 aa17.25■□□□□ 0.35
CCHCR1-203ENST00000396268 NFAT5O94916 1531 aa17.25■□□□□ 0.35
CCHCR1-203ENST00000396268 NASPP49321 788 aaPredicted RBP17.24■□□□□ 0.35
CCHCR1-203ENST00000396268 MTHFSDQ2M296 383 aaKnown RBP17.24■□□□□ 0.35
CCHCR1-203ENST00000396268 LRRC59Q96AG4 307 aaKnown RBP17.24■□□□□ 0.35
CCHCR1-203ENST00000396268 USP26Q9BXU7 913 aa17.24■□□□□ 0.35
CCHCR1-203ENST00000396268 FAM13BQ9NYF5 915 aa17.24■□□□□ 0.35
CCHCR1-203ENST00000396268 SDSP20132 328 aa17.24■□□□□ 0.35
CCHCR1-203ENST00000396268 ZC3H6P61129 1189 aaKnown RBP17.24■□□□□ 0.35
CCHCR1-203ENST00000396268 CEP85Q6P2H3 762 aa17.24■□□□□ 0.35
CCHCR1-203ENST00000396268 MEIS3Q99687 375 aa17.24■□□□□ 0.35
CCHCR1-203ENST00000396268 IGSF1Q8N6C5 1336 aa17.23■□□□□ 0.35
CCHCR1-203ENST00000396268 RPAP2Q8IXW5 612 aaPredicted RBP17.23■□□□□ 0.35
CCHCR1-203ENST00000396268 HAP1P54257 671 aaPredicted RBP17.23■□□□□ 0.35
CCHCR1-203ENST00000396268 AXIN2Q9Y2T1 843 aa17.23■□□□□ 0.35
CCHCR1-203ENST00000396268 SLC4A10Q6U841 1118 aa17.22■□□□□ 0.35
CCHCR1-203ENST00000396268 CADPS2Q86UW7 1296 aa17.22■□□□□ 0.35
CCHCR1-203ENST00000396268 MSH6P52701 1360 aa17.22■□□□□ 0.35
CCHCR1-203ENST00000396268 TRPM3Q9HCF6 1732 aaPredicted RBP17.22■□□□□ 0.35
CCHCR1-203ENST00000396268 NBPF6Q5VWK0 638 aa17.22■□□□□ 0.35
CCHCR1-203ENST00000396268 ANP32BQ92688 251 aaKnown RBP17.22■□□□□ 0.35
CCHCR1-203ENST00000396268 NBPF4Q96M43 638 aa17.22■□□□□ 0.35
CCHCR1-203ENST00000396268 MIS18AQ9NYP9 233 aa17.22■□□□□ 0.35
CCHCR1-203ENST00000396268 R3HCC1Q9Y3T6 440 aaKnown RBP17.22■□□□□ 0.35
CCHCR1-203ENST00000396268 USP54Q70EL1 1684 aa17.21■□□□□ 0.35
CCHCR1-203ENST00000396268 ARHGEF10O15013 1369 aa17.21■□□□□ 0.35
CCHCR1-203ENST00000396268 SLC4A2P04920 1241 aa17.21■□□□□ 0.35
CCHCR1-203ENST00000396268 KLHL40Q2TBA0 621 aa17.21■□□□□ 0.35
CCHCR1-203ENST00000396268 IP6K1Q92551 441 aa17.21■□□□□ 0.35
CCHCR1-203ENST00000396268 CHAMP1Q96JM3 812 aa17.21■□□□□ 0.35
CCHCR1-203ENST00000396268 KIF24Q5T7B8 1368 aa17.21■□□□□ 0.35
CCHCR1-203ENST00000396268 NUCB2P80303 420 aa17.21■□□□□ 0.35
CCHCR1-203ENST00000396268 PKP1Q13835 747 aa17.21■□□□□ 0.35
CCHCR1-203ENST00000396268 ST18O60284 1047 aa17.2■□□□□ 0.34
CCHCR1-203ENST00000396268 FOXD4L5Q5VV16 416 aaPredicted RBP17.2■□□□□ 0.34
CCHCR1-203ENST00000396268 FOXD4L4Q8WXT5 416 aaPredicted RBP17.2■□□□□ 0.34
CCHCR1-203ENST00000396268 BRINP3Q76B58 766 aa17.2■□□□□ 0.34
CCHCR1-203ENST00000396268 CHL1O00533 1208 aa17.19■□□□□ 0.34
CCHCR1-203ENST00000396268 MSNP26038 577 aaKnown RBP17.19■□□□□ 0.34
CCHCR1-203ENST00000396268 CAVIN1Q6NZI2 390 aaKnown RBP17.19■□□□□ 0.34
CCHCR1-203ENST00000396268 ARHGEF25Q86VW2 580 aa17.19■□□□□ 0.34
CCHCR1-203ENST00000396268 RTL1A6NKG5 1358 aa17.19■□□□□ 0.34
CCHCR1-203ENST00000396268 KDRP35968 1356 aa17.19■□□□□ 0.34
CCHCR1-203ENST00000396268 AK9Q5TCS8 1911 aa17.19■□□□□ 0.34
CCHCR1-203ENST00000396268 RGPD2P0DJD1 1756 aa17.19■□□□□ 0.34
CCHCR1-203ENST00000396268 ATP10DQ9P241 1426 aa17.19■□□□□ 0.34
CCHCR1-203ENST00000396268 ZGPATQ8N5A5 531 aaKnown RBP17.19■□□□□ 0.34
CCHCR1-203ENST00000396268 KCNH5Q8NCM2 988 aa17.18■□□□□ 0.34
CCHCR1-203ENST00000396268 F6X3S4 739 aa17.18■□□□□ 0.34
CCHCR1-203ENST00000396268 REC8O95072 547 aa17.18■□□□□ 0.34
CCHCR1-203ENST00000396268 MED1Q15648 1581 aaPredicted RBP17.17■□□□□ 0.34
CCHCR1-203ENST00000396268 CLEC17AQ6ZS10 378 aa17.17■□□□□ 0.34
CCHCR1-203ENST00000396268 MPNDQ8N594 471 aa17.17■□□□□ 0.34
CCHCR1-203ENST00000396268 DCCP43146 1447 aa17.17■□□□□ 0.34
CCHCR1-203ENST00000396268 KIF1AQ12756 1690 aa17.17■□□□□ 0.34
CCHCR1-203ENST00000396268 HMMRO75330 724 aa17.16■□□□□ 0.34
CCHCR1-203ENST00000396268 PTPRCP08575 1304 aa17.16■□□□□ 0.34
CCHCR1-203ENST00000396268 CCDC173Q0VFZ6 552 aa17.16■□□□□ 0.34
CCHCR1-203ENST00000396268 CHRNA2Q15822 529 aa17.16■□□□□ 0.34
CCHCR1-203ENST00000396268 SLAIN2Q9P270 581 aa17.16■□□□□ 0.34
CCHCR1-203ENST00000396268 RGS12O14924 1447 aa17.16■□□□□ 0.34
CCHCR1-203ENST00000396268 PRPF40AO75400 957 aaKnown RBP17.16■□□□□ 0.34
CCHCR1-203ENST00000396268 TPM2P07951 284 aa17.16■□□□□ 0.34
CCHCR1-203ENST00000396268 TPRNQ4KMQ1 711 aa17.16■□□□□ 0.34
CCHCR1-203ENST00000396268 TSHZ3Q63HK5 1081 aa17.16■□□□□ 0.34
CCHCR1-203ENST00000396268 ERC2O15083 957 aa17.15■□□□□ 0.34
CCHCR1-203ENST00000396268 ZSCAN30Q86W11 494 aa17.15■□□□□ 0.34
CCHCR1-203ENST00000396268 G2E3Q7L622 706 aa17.15■□□□□ 0.34
CCHCR1-203ENST00000396268 RTF1Q92541 710 aaKnown RBP17.15■□□□□ 0.34
CCHCR1-203ENST00000396268 RBM27Q9P2N5 1060 aaKnown RBP17.15■□□□□ 0.34
CCHCR1-203ENST00000396268 TSPYL4Q9UJ04 414 aa17.15■□□□□ 0.34
CCHCR1-203ENST00000396268 SLIT3O75094 1523 aa17.15■□□□□ 0.34
CCHCR1-203ENST00000396268 ALS2Q96Q42 1657 aa17.14■□□□□ 0.33
CCHCR1-203ENST00000396268 CWC22Q9HCG8 908 aaKnown RBP17.14■□□□□ 0.33
CCHCR1-203ENST00000396268 EXOC6BQ9Y2D4 811 aa17.14■□□□□ 0.33
CCHCR1-203ENST00000396268 NPHP3Q7Z494 1330 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms