RNA–Protein interactions for RNA: ENST00000396183.7

CTNNB1-202, Transcript of catenin beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNNB1, Length 3,268 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNB1-202ENST00000396183 PIK3R4Q99570 1358 aa17.2■□□□□ 0.34
CTNNB1-202ENST00000396183 CD2BP2O95400 341 aaKnown RBP17.2■□□□□ 0.34
CTNNB1-202ENST00000396183 CCT4P50991 539 aaKnown RBP17.2■□□□□ 0.34
CTNNB1-202ENST00000396183 KCNH5Q8NCM2 988 aa17.2■□□□□ 0.34
CTNNB1-202ENST00000396183 SRCIN1Q9C0H9 1055 aa17.2■□□□□ 0.34
CTNNB1-202ENST00000396183 DCTPP1Q9H773 170 aa17.2■□□□□ 0.34
CTNNB1-202ENST00000396183 INTS3Q68E01 1043 aaKnown RBP17.19■□□□□ 0.34
CTNNB1-202ENST00000396183 OVOS2A0A0J9YW53 1432 aa17.19■□□□□ 0.34
CTNNB1-202ENST00000396183 OVOS2Q6IE36 1432 aa17.19■□□□□ 0.34
CTNNB1-202ENST00000396183 RPAP2Q8IXW5 612 aaPredicted RBP17.19■□□□□ 0.34
CTNNB1-202ENST00000396183 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.19■□□□□ 0.34
CTNNB1-202ENST00000396183 NRXN3Q9Y4C0 1643 aa17.19■□□□□ 0.34
CTNNB1-202ENST00000396183 BMP2KLQ5H9B9 411 aa17.18■□□□□ 0.34
CTNNB1-202ENST00000396183 PPP1R42Q7Z4L9 355 aa17.18■□□□□ 0.34
CTNNB1-202ENST00000396183 PA2G4Q9UQ80 394 aaKnown RBP17.18■□□□□ 0.34
CTNNB1-202ENST00000396183 MAP3K5Q99683 1374 aa17.18■□□□□ 0.34
CTNNB1-202ENST00000396183 RIC3Q7Z5B4 369 aa17.17■□□□□ 0.34
CTNNB1-202ENST00000396183 TECPR2O15040 1411 aa17.17■□□□□ 0.34
CTNNB1-202ENST00000396183 LRRCC1Q9C099 1032 aa17.17■□□□□ 0.34
CTNNB1-202ENST00000396183 PTPRCP08575 1304 aa17.16■□□□□ 0.34
CTNNB1-202ENST00000396183 GNAI3P08754 354 aa17.16■□□□□ 0.34
CTNNB1-202ENST00000396183 SYTL4Q96C24 671 aaPredicted RBP17.16■□□□□ 0.34
CTNNB1-202ENST00000396183 PRDM11Q9NQV5 511 aa17.16■□□□□ 0.34
CTNNB1-202ENST00000396183 MAP3K2Q9Y2U5 619 aa17.16■□□□□ 0.34
CTNNB1-202ENST00000396183 CEP170BQ9Y4F5 1589 aaPredicted RBP17.16■□□□□ 0.34
CTNNB1-202ENST00000396183 NCBP3Q53F19 620 aaKnown RBP17.16■□□□□ 0.34
CTNNB1-202ENST00000396183 TOM1L2Q6ZVM7 507 aa17.16■□□□□ 0.34
CTNNB1-202ENST00000396183 KLHDC4Q8TBB5 520 aa17.16■□□□□ 0.34
CTNNB1-202ENST00000396183 CCDC85AQ96PX6 553 aaPredicted RBP17.16■□□□□ 0.34
CTNNB1-202ENST00000396183 UPF3BQ9BZI7 483 aaKnown RBP17.15■□□□□ 0.34
CTNNB1-202ENST00000396183 C19orf44Q9H6X5 657 aa17.15■□□□□ 0.34
CTNNB1-202ENST00000396183 RTL1A6NKG5 1358 aa17.15■□□□□ 0.34
CTNNB1-202ENST00000396183 ATP5J2-PTCD1G3V325 749 aa17.15■□□□□ 0.34
CTNNB1-202ENST00000396183 TTC22Q5TAA0 569 aa17.15■□□□□ 0.34
CTNNB1-202ENST00000396183 USP32Q8NFA0 1604 aa17.15■□□□□ 0.34
CTNNB1-202ENST00000396183 TTC5Q8N0Z6 440 aa17.15■□□□□ 0.34
CTNNB1-202ENST00000396183 EVA1CP58658 441 aa17.14■□□□□ 0.33
CTNNB1-202ENST00000396183 ADGRB2O60241 1585 aa17.14■□□□□ 0.33
CTNNB1-202ENST00000396183 KIF20BQ96Q89 1820 aa17.14■□□□□ 0.33
CTNNB1-202ENST00000396183 USP44Q9H0E7 712 aa17.13■□□□□ 0.33
CTNNB1-202ENST00000396183 ARHGEF10O15013 1369 aa17.13■□□□□ 0.33
CTNNB1-202ENST00000396183 DNAAF4Q8WXU2 420 aa17.13■□□□□ 0.33
CTNNB1-202ENST00000396183 UBR1Q8IWV7 1749 aa17.13■□□□□ 0.33
CTNNB1-202ENST00000396183 CHAMP1Q96JM3 812 aa17.13■□□□□ 0.33
CTNNB1-202ENST00000396183 TATP17735 454 aaPredicted RBP17.12■□□□□ 0.33
CTNNB1-202ENST00000396183 EIF4A1P60842 406 aaKnown RBP17.12■□□□□ 0.33
CTNNB1-202ENST00000396183 NEK4P51957 841 aa17.12■□□□□ 0.33
CTNNB1-202ENST00000396183 USP31Q70CQ4 1352 aa17.12■□□□□ 0.33
CTNNB1-202ENST00000396183 KCNJ4P48050 445 aa17.11■□□□□ 0.33
CTNNB1-202ENST00000396183 PDE1AP54750 535 aa17.11■□□□□ 0.33
CTNNB1-202ENST00000396183 RNMTO43148 476 aaKnown RBP17.11■□□□□ 0.33
CTNNB1-202ENST00000396183 MX1P20591 662 aa17.11■□□□□ 0.33
CTNNB1-202ENST00000396183 ARHGEF25Q86VW2 580 aa17.11■□□□□ 0.33
CTNNB1-202ENST00000396183 CRB1P82279 1406 aa17.11■□□□□ 0.33
CTNNB1-202ENST00000396183 CHMP5Q9NZZ3 219 aa17.11■□□□□ 0.33
CTNNB1-202ENST00000396183 RIMS1Q86UR5 1692 aaKnown RBP17.1■□□□□ 0.33
CTNNB1-202ENST00000396183 DIP2AQ14689 1571 aa17.1■□□□□ 0.33
CTNNB1-202ENST00000396183 UNC5CLQ8IV45 518 aa17.1■□□□□ 0.33
CTNNB1-202ENST00000396183 CWC27Q6UX04 472 aaKnown RBP17.1■□□□□ 0.33
CTNNB1-202ENST00000396183 CCDC8Q9H0W5 538 aaPredicted RBP17.1■□□□□ 0.33
CTNNB1-202ENST00000396183 TMEM94Q12767 1356 aa17.1■□□□□ 0.33
CTNNB1-202ENST00000396183 AKAP4Q5JQC9 854 aa17.09■□□□□ 0.33
CTNNB1-202ENST00000396183 RGPD8O14715 1765 aaPredicted RBP17.09■□□□□ 0.33
CTNNB1-202ENST00000396183 BRPF1P55201 1214 aaPredicted RBP17.08■□□□□ 0.33
CTNNB1-202ENST00000396183 MYD88Q99836 296 aa17.08■□□□□ 0.33
CTNNB1-202ENST00000396183 NDUFB9Q9Y6M9 179 aa17.08■□□□□ 0.33
CTNNB1-202ENST00000396183 REREQ9P2R6 1566 aa17.08■□□□□ 0.33
CTNNB1-202ENST00000396183 CABP4P57796 275 aa17.08■□□□□ 0.32
CTNNB1-202ENST00000396183 SPG7Q9UQ90 795 aa17.08■□□□□ 0.32
CTNNB1-202ENST00000396183 PTCH1Q13635 1447 aa17.08■□□□□ 0.32
CTNNB1-202ENST00000396183 COPS6Q7L5N1 327 aa17.08■□□□□ 0.32
CTNNB1-202ENST00000396183 NPHP4O75161 1426 aaPredicted RBP17.07■□□□□ 0.32
CTNNB1-202ENST00000396183 SSFA2P28290 1259 aa17.07■□□□□ 0.32
CTNNB1-202ENST00000396183 DBF4Q9UBU7 674 aaPredicted RBP17.07■□□□□ 0.32
CTNNB1-202ENST00000396183 USP16Q9Y5T5 823 aa17.07■□□□□ 0.32
CTNNB1-202ENST00000396183 XAGE3Q8WTP9 111 aa17.06■□□□□ 0.32
CTNNB1-202ENST00000396183 FAM177BA6PVY3 158 aa17.06■□□□□ 0.32
CTNNB1-202ENST00000396183 ZNF496Q96IT1 587 aaPredicted RBP17.06■□□□□ 0.32
CTNNB1-202ENST00000396183 KIAA0232Q92628 1395 aa17.06■□□□□ 0.32
CTNNB1-202ENST00000396183 IFIT2P09913 472 aaKnown RBP17.06■□□□□ 0.32
CTNNB1-202ENST00000396183 ATP8B2P98198 1209 aa17.06■□□□□ 0.32
CTNNB1-202ENST00000396183 K7ELQ4 463 aaPredicted RBP17.05■□□□□ 0.32
CTNNB1-202ENST00000396183 MCM4P33991 863 aa17.05■□□□□ 0.32
CTNNB1-202ENST00000396183 REC8O95072 547 aa17.05■□□□□ 0.32
CTNNB1-202ENST00000396183 AMOTQ4VCS5 1084 aa17.05■□□□□ 0.32
CTNNB1-202ENST00000396183 C3P01024 1663 aa17.05■□□□□ 0.32
CTNNB1-202ENST00000396183 SOS1Q07889 1333 aaPredicted RBP17.05■□□□□ 0.32
CTNNB1-202ENST00000396183 ERC2O15083 957 aa17.04■□□□□ 0.32
CTNNB1-202ENST00000396183 AACSQ86V21 672 aa17.04■□□□□ 0.32
CTNNB1-202ENST00000396183 ZGPATQ8N5A5 531 aaKnown RBP17.04■□□□□ 0.32
CTNNB1-202ENST00000396183 ZBTB3Q9H5J0 574 aa17.04■□□□□ 0.32
CTNNB1-202ENST00000396183 TRAK2O60296 914 aa17.04■□□□□ 0.32
CTNNB1-202ENST00000396183 NEXNQ0ZGT2 675 aa17.04■□□□□ 0.32
CTNNB1-202ENST00000396183 CPA1P15085 419 aa17.04■□□□□ 0.32
CTNNB1-202ENST00000396183 RHPN1Q8TCX5 695 aa17.04■□□□□ 0.32
CTNNB1-202ENST00000396183 ITSN1Q15811 1721 aa17.04■□□□□ 0.32
CTNNB1-202ENST00000396183 GIGYF1O75420 1035 aaPredicted RBP17.03■□□□□ 0.32
CTNNB1-202ENST00000396183 PKP1Q13835 747 aa17.03■□□□□ 0.32
CTNNB1-202ENST00000396183 MCTP1Q6DN14 999 aa17.03■□□□□ 0.32
CTNNB1-202ENST00000396183 KIAA1211Q6ZU35 1233 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms