RNA–Protein interactions for RNA: ENST00000395878.7

UBFD1-201, Transcript of ubiquitin family domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene UBFD1, Length 5,110 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-201ENST00000395878 SCAND2PQ9GZW5 306 aaPredicted RBP20.34■□□□□ 0.85
UBFD1-201ENST00000395878 SMARCA5O60264 1052 aaPredicted RBP20.34■□□□□ 0.85
UBFD1-201ENST00000395878 METTL24Q5JXM2 366 aa20.34■□□□□ 0.85
UBFD1-201ENST00000395878 C20orf194Q5TEA3 1177 aa20.34■□□□□ 0.85
UBFD1-201ENST00000395878 ABCA10Q8WWZ4 1543 aa20.33■□□□□ 0.85
UBFD1-201ENST00000395878 C11orf95C9JLR9 678 aaPredicted RBP20.33■□□□□ 0.85
UBFD1-201ENST00000395878 ZSCAN30Q86W11 494 aa20.33■□□□□ 0.85
UBFD1-201ENST00000395878 ZC3H6P61129 1189 aaKnown RBP20.33■□□□□ 0.84
UBFD1-201ENST00000395878 FAM177A1Q8N128 213 aaPredicted RBP20.33■□□□□ 0.84
UBFD1-201ENST00000395878 WAPLQ7Z5K2 1190 aa20.32■□□□□ 0.84
UBFD1-201ENST00000395878 MAP3K1Q13233 1512 aa20.32■□□□□ 0.84
UBFD1-201ENST00000395878 SSBP05455 408 aaKnown RBP eCLIP20.31■□□□□ 0.84
UBFD1-201ENST00000395878 FERMT3Q86UX7 667 aa20.31■□□□□ 0.84
UBFD1-201ENST00000395878 HMGB1P09429 215 aaKnown RBP20.31■□□□□ 0.84
UBFD1-201ENST00000395878 XPCQ01831 940 aaPredicted RBP20.31■□□□□ 0.84
UBFD1-201ENST00000395878 CCDC183Q5T5S1 534 aa20.31■□□□□ 0.84
UBFD1-201ENST00000395878 KIF2AO00139 706 aaPredicted RBP20.3■□□□□ 0.84
UBFD1-201ENST00000395878 EPB41L2O43491 1005 aaKnown RBP20.3■□□□□ 0.84
UBFD1-201ENST00000395878 NSD2O96028 1365 aa20.3■□□□□ 0.84
UBFD1-201ENST00000395878 CC2D2AQ9P2K1 1620 aa20.3■□□□□ 0.84
UBFD1-201ENST00000395878 NME9Q86XW9 330 aa20.3■□□□□ 0.84
UBFD1-201ENST00000395878 CCDC85AQ96PX6 553 aaPredicted RBP20.3■□□□□ 0.84
UBFD1-201ENST00000395878 PTPRCP08575 1304 aa20.3■□□□□ 0.84
UBFD1-201ENST00000395878 RBM5P52756 815 aaKnown RBP eCLIP20.3■□□□□ 0.84
UBFD1-201ENST00000395878 CFAP100Q494V2 611 aa20.3■□□□□ 0.84
UBFD1-201ENST00000395878 BOLA2Q9H3K6 86 aa20.29■□□□□ 0.84
UBFD1-201ENST00000395878 NCOA1Q15788 1441 aa20.29■□□□□ 0.84
UBFD1-201ENST00000395878 IFIT1P09914 478 aaKnown RBP20.29■□□□□ 0.84
UBFD1-201ENST00000395878 ZNF287Q9HBT7 754 aa20.29■□□□□ 0.84
UBFD1-201ENST00000395878 ANO10Q9NW15 660 aa20.29■□□□□ 0.84
UBFD1-201ENST00000395878 NUTM2BA6NNL0 878 aaPredicted RBP20.29■□□□□ 0.84
UBFD1-201ENST00000395878 NUTM2EB1AL46 878 aaPredicted RBP20.29■□□□□ 0.84
UBFD1-201ENST00000395878 EIF5P55010 431 aaKnown RBP20.29■□□□□ 0.84
UBFD1-201ENST00000395878 NUTM2AQ8IVF1 878 aaPredicted RBP20.29■□□□□ 0.84
UBFD1-201ENST00000395878 DNAAF4Q8WXU2 420 aa20.29■□□□□ 0.84
UBFD1-201ENST00000395878 CCDC196A0A1B0GTZ2 297 aa20.28■□□□□ 0.84
UBFD1-201ENST00000395878 MYD88Q99836 296 aa20.28■□□□□ 0.84
UBFD1-201ENST00000395878 ABCF2Q9UG63 623 aa20.28■□□□□ 0.84
UBFD1-201ENST00000395878 KIF14Q15058 1648 aa20.28■□□□□ 0.84
UBFD1-201ENST00000395878 ARHGAP29Q52LW3 1261 aa20.28■□□□□ 0.84
UBFD1-201ENST00000395878 AEBP2Q6ZN18 517 aaPredicted RBP20.28■□□□□ 0.84
UBFD1-201ENST00000395878 FAM135AQ9P2D6 1515 aa20.28■□□□□ 0.84
UBFD1-201ENST00000395878 SPINK5Q9NQ38 1064 aaPredicted RBP20.28■□□□□ 0.84
UBFD1-201ENST00000395878 CAMK4Q16566 473 aa20.27■□□□□ 0.84
UBFD1-201ENST00000395878 NEFHP12036 1026 aa20.27■□□□□ 0.84
UBFD1-201ENST00000395878 EMILIN1Q9Y6C2 1016 aa20.27■□□□□ 0.84
UBFD1-201ENST00000395878 HMGB2P26583 209 aaKnown RBP20.27■□□□□ 0.84
UBFD1-201ENST00000395878 ZSCAN29Q8IWY8 852 aaPredicted RBP20.27■□□□□ 0.84
UBFD1-201ENST00000395878 ZNF652Q9Y2D9 606 aa20.27■□□□□ 0.84
UBFD1-201ENST00000395878 LIMCH1Q9UPQ0 1083 aa20.27■□□□□ 0.83
UBFD1-201ENST00000395878 SCAF11Q99590 1463 aaKnown RBP20.26■□□□□ 0.83
UBFD1-201ENST00000395878 TRIM27P14373 513 aa20.26■□□□□ 0.83
UBFD1-201ENST00000395878 SFPQP23246 707 aaKnown RBP eCLIP20.26■□□□□ 0.83
UBFD1-201ENST00000395878 DHX29Q7Z478 1369 aaKnown RBP20.26■□□□□ 0.83
UBFD1-201ENST00000395878 CUL7Q14999 1698 aa20.26■□□□□ 0.83
UBFD1-201ENST00000395878 KIAA0754O94854 1291 aa20.26■□□□□ 0.83
UBFD1-201ENST00000395878 HYPKQ9NX55 129 aa20.26■□□□□ 0.83
UBFD1-201ENST00000395878 LRRFIP2Q9Y608 721 aaKnown RBP20.26■□□□□ 0.83
UBFD1-201ENST00000395878 TMOD3Q9NYL9 352 aa20.26■□□□□ 0.83
UBFD1-201ENST00000395878 ZNF76P36508 570 aa20.25■□□□□ 0.83
UBFD1-201ENST00000395878 KIAA1328Q86T90 577 aa20.25■□□□□ 0.83
UBFD1-201ENST00000395878 DBF4Q9UBU7 674 aaPredicted RBP20.25■□□□□ 0.83
UBFD1-201ENST00000395878 WASLO00401 505 aaPredicted RBP20.25■□□□□ 0.83
UBFD1-201ENST00000395878 C8orf76Q96K31 380 aa20.25■□□□□ 0.83
UBFD1-201ENST00000395878 UBXN4Q92575 508 aa20.25■□□□□ 0.83
UBFD1-201ENST00000395878 NAPBQ9H115 298 aa20.25■□□□□ 0.83
UBFD1-201ENST00000395878 F6X3S4 739 aa20.25■□□□□ 0.83
UBFD1-201ENST00000395878 ZNF397Q8NF99 534 aaPredicted RBP20.25■□□□□ 0.83
UBFD1-201ENST00000395878 PHAXQ9H814 394 aaKnown RBP20.25■□□□□ 0.83
UBFD1-201ENST00000395878 ADGRF5Q8IZF2 1346 aa20.25■□□□□ 0.83
UBFD1-201ENST00000395878 ZRSR2Q15696 482 aaKnown RBP20.24■□□□□ 0.83
UBFD1-201ENST00000395878 CAVIN4Q5BKX8 364 aa20.24■□□□□ 0.83
UBFD1-201ENST00000395878 TBC1D2Q9BYX2 928 aa20.24■□□□□ 0.83
UBFD1-201ENST00000395878 ANKRD18AQ8IVF6 992 aa20.24■□□□□ 0.83
UBFD1-201ENST00000395878 PDCL2Q8N4E4 241 aa20.24■□□□□ 0.83
UBFD1-201ENST00000395878 CTAGE5O15320 804 aa20.24■□□□□ 0.83
UBFD1-201ENST00000395878 ZSCAN12O43309 604 aa20.24■□□□□ 0.83
UBFD1-201ENST00000395878 TAF4BQ92750 862 aa20.24■□□□□ 0.83
UBFD1-201ENST00000395878 CD109Q6YHK3 1445 aa20.24■□□□□ 0.83
UBFD1-201ENST00000395878 PTCD1O75127 700 aaKnown RBP20.24■□□□□ 0.83
UBFD1-201ENST00000395878 SEPT7Q16181 437 aaKnown RBP20.24■□□□□ 0.83
UBFD1-201ENST00000395878 TTC21BQ7Z4L5 1316 aa20.23■□□□□ 0.83
UBFD1-201ENST00000395878 BICDL1Q6ZP65 573 aa20.23■□□□□ 0.83
UBFD1-201ENST00000395878 RPRD2Q5VT52 1461 aaKnown RBP20.23■□□□□ 0.83
UBFD1-201ENST00000395878 MAP3K12Q12852 859 aa20.23■□□□□ 0.83
UBFD1-201ENST00000395878 HSP90AB3PQ58FF7 597 aa20.23■□□□□ 0.83
UBFD1-201ENST00000395878 PIBF1Q8WXW3 757 aa20.23■□□□□ 0.83
UBFD1-201ENST00000395878 ADGRL1O94910 1474 aa20.23■□□□□ 0.83
UBFD1-201ENST00000395878 IFIT5Q13325 482 aaKnown RBP20.23■□□□□ 0.83
UBFD1-201ENST00000395878 BMP2KLQ5H9B9 411 aa20.23■□□□□ 0.83
UBFD1-201ENST00000395878 CCDC148Q8NFR7 591 aa20.23■□□□□ 0.83
UBFD1-201ENST00000395878 SEPT11Q9NVA2 429 aaKnown RBP20.23■□□□□ 0.83
UBFD1-201ENST00000395878 FLIIQ13045 1269 aa20.22■□□□□ 0.83
UBFD1-201ENST00000395878 CCDC8Q9H0W5 538 aaPredicted RBP20.22■□□□□ 0.83
UBFD1-201ENST00000395878 SEC63Q9UGP8 760 aaKnown RBP20.22■□□□□ 0.83
UBFD1-201ENST00000395878 IL16Q14005 1332 aa20.22■□□□□ 0.83
UBFD1-201ENST00000395878 SSFA2P28290 1259 aa20.22■□□□□ 0.83
UBFD1-201ENST00000395878 USP5P45974 858 aa20.22■□□□□ 0.83
UBFD1-201ENST00000395878 PTPN14Q15678 1187 aa20.22■□□□□ 0.83
UBFD1-201ENST00000395878 EVI5LQ96CN4 794 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms