RNA–Protein interactions for RNA: ENST00000395131.5

PFDN6-204, Transcript of prefoldin subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN6, Length 884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-204ENST00000395131 PIM2Q9P1W9 311 aa19.73■□□□□ 0.75
PFDN6-204ENST00000395131 GNPATO15228 680 aa19.72■□□□□ 0.75
PFDN6-204ENST00000395131 VEGFAP15692 232 aaPredicted RBP19.72■□□□□ 0.75
PFDN6-204ENST00000395131 TATP17735 454 aaPredicted RBP19.72■□□□□ 0.75
PFDN6-204ENST00000395131 TMF1P82094 1093 aa19.72■□□□□ 0.75
PFDN6-204ENST00000395131 PIGBQ92521 554 aa19.72■□□□□ 0.75
PFDN6-204ENST00000395131 CYP27B1O15528 508 aa19.71■□□□□ 0.75
PFDN6-204ENST00000395131 AMPHP49418 695 aa19.71■□□□□ 0.75
PFDN6-204ENST00000395131 RTL1A6NKG5 1358 aa19.7■□□□□ 0.74
PFDN6-204ENST00000395131 KDM6AO15550 1401 aaPredicted RBP19.69■□□□□ 0.74
PFDN6-204ENST00000395131 FOXN1O15353 648 aa19.69■□□□□ 0.74
PFDN6-204ENST00000395131 ITPK1Q13572 414 aa19.69■□□□□ 0.74
PFDN6-204ENST00000395131 FAM161AQ3B820 660 aa19.69■□□□□ 0.74
PFDN6-204ENST00000395131 DALRD3Q5D0E6 543 aaKnown RBP19.69■□□□□ 0.74
PFDN6-204ENST00000395131 GLTPD2A6NH11 291 aa19.68■□□□□ 0.74
PFDN6-204ENST00000395131 NKX1-1Q15270 411 aaPredicted RBP19.68■□□□□ 0.74
PFDN6-204ENST00000395131 TRAPPC3LQ5T215 181 aa19.68■□□□□ 0.74
PFDN6-204ENST00000395131 SLC12A5Q9H2X9 1139 aa19.68■□□□□ 0.74
PFDN6-204ENST00000395131 CREBZFQ9NS37 354 aa19.67■□□□□ 0.74
PFDN6-204ENST00000395131 TERF2IPQ9NYB0 399 aa19.67■□□□□ 0.74
PFDN6-204ENST00000395131 A0A1W2PP64 1363 aa19.67■□□□□ 0.74
PFDN6-204ENST00000395131 USHBP1Q8N6Y0 703 aa19.66■□□□□ 0.74
PFDN6-204ENST00000395131 TMC1Q8TDI8 760 aa19.66■□□□□ 0.74
PFDN6-204ENST00000395131 PARP3Q9Y6F1 533 aa19.66■□□□□ 0.74
PFDN6-204ENST00000395131 ZNF831Q5JPB2 1677 aa19.65■□□□□ 0.74
PFDN6-204ENST00000395131 GYS1P13807 737 aa19.65■□□□□ 0.74
PFDN6-204ENST00000395131 ADRA2BP18089 450 aa19.65■□□□□ 0.74
PFDN6-204ENST00000395131 FBLN1P23142 703 aa19.65■□□□□ 0.74
PFDN6-204ENST00000395131 ATP6V1AP38606 617 aa19.65■□□□□ 0.74
PFDN6-204ENST00000395131 RTCBQ9Y3I0 505 aaKnown RBP19.65■□□□□ 0.74
PFDN6-204ENST00000395131 COG3Q96JB2 828 aa19.64■□□□□ 0.73
PFDN6-204ENST00000395131 CCDC88AQ3V6T2 1871 aa19.63■□□□□ 0.73
PFDN6-204ENST00000395131 CTCFP49711 727 aaPredicted RBP19.63■□□□□ 0.73
PFDN6-204ENST00000395131 RGS19P49795 217 aa19.63■□□□□ 0.73
PFDN6-204ENST00000395131 ARHGEF1Q92888 912 aaKnown RBP19.63■□□□□ 0.73
PFDN6-204ENST00000395131 SMG6Q86US8 1419 aaKnown RBP19.62■□□□□ 0.73
PFDN6-204ENST00000395131 POTECB2RU33 542 aa19.62■□□□□ 0.73
PFDN6-204ENST00000395131 MKRN1Q9UHC7 482 aaKnown RBP19.62■□□□□ 0.73
PFDN6-204ENST00000395131 ROCK2O75116 1388 aaKnown RBP19.61■□□□□ 0.73
PFDN6-204ENST00000395131 RC3H1Q5TC82 1133 aaKnown RBP19.61■□□□□ 0.73
PFDN6-204ENST00000395131 ABHD8Q96I13 439 aa19.61■□□□□ 0.73
PFDN6-204ENST00000395131 PUS7Q96PZ0 661 aaKnown RBP19.61■□□□□ 0.73
PFDN6-204ENST00000395131 ASAP1Q9ULH1 1129 aa19.61■□□□□ 0.73
PFDN6-204ENST00000395131 VIRMAQ69YN4 1812 aaKnown RBP19.6■□□□□ 0.73
PFDN6-204ENST00000395131 COL5A3P25940 1745 aaPredicted RBP19.6■□□□□ 0.73
PFDN6-204ENST00000395131 LMNB1P20700 586 aa19.6■□□□□ 0.73
PFDN6-204ENST00000395131 TIAM2Q8IVF5 1701 aa19.59■□□□□ 0.73
PFDN6-204ENST00000395131 CNTNAP1P78357 1384 aa19.59■□□□□ 0.73
PFDN6-204ENST00000395131 MLLT1Q03111 559 aaPredicted RBP19.59■□□□□ 0.73
PFDN6-204ENST00000395131 L3MBTL2Q969R5 705 aa19.59■□□□□ 0.73
PFDN6-204ENST00000395131 INSRP06213 1382 aa19.58■□□□□ 0.73
PFDN6-204ENST00000395131 KDRP35968 1356 aa19.58■□□□□ 0.73
PFDN6-204ENST00000395131 RFC4P35249 363 aa19.58■□□□□ 0.72
PFDN6-204ENST00000395131 ATG3Q9NT62 314 aa19.58■□□□□ 0.72
PFDN6-204ENST00000395131 TMOD3Q9NYL9 352 aa19.58■□□□□ 0.72
PFDN6-204ENST00000395131 RPS6KA4O75676 772 aa19.57■□□□□ 0.72
PFDN6-204ENST00000395131 AIDAQ96BJ3 306 aa19.57■□□□□ 0.72
PFDN6-204ENST00000395131 WBP1LQ9NX94 342 aa19.57■□□□□ 0.72
PFDN6-204ENST00000395131 MYH14Q7Z406 1995 aaKnown RBP19.57■□□□□ 0.72
PFDN6-204ENST00000395131 CNTNAP4Q9C0A0 1308 aa19.56■□□□□ 0.72
PFDN6-204ENST00000395131 CHRNA5P30532 468 aa19.56■□□□□ 0.72
PFDN6-204ENST00000395131 RASSF7Q02833 373 aa19.56■□□□□ 0.72
PFDN6-204ENST00000395131 RRS1Q15050 365 aaKnown RBP19.56■□□□□ 0.72
PFDN6-204ENST00000395131 NCAPD2Q15021 1401 aa19.55■□□□□ 0.72
PFDN6-204ENST00000395131 LBX1P52954 281 aa19.54■□□□□ 0.72
PFDN6-204ENST00000395131 HSP90AB2PQ58FF8 381 aa19.54■□□□□ 0.72
PFDN6-204ENST00000395131 CHADLQ6NUI6 762 aa19.54■□□□□ 0.72
PFDN6-204ENST00000395131 SLC4A9Q96Q91 983 aa19.54■□□□□ 0.72
PFDN6-204ENST00000395131 DICER1Q9UPY3 1922 aaKnown RBP19.54■□□□□ 0.72
PFDN6-204ENST00000395131 KIF24Q5T7B8 1368 aa19.54■□□□□ 0.72
PFDN6-204ENST00000395131 DLEC1Q9Y238 1755 aa19.53■□□□□ 0.72
PFDN6-204ENST00000395131 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.53■□□□□ 0.724e-8■■□□□ 13.1
PFDN6-204ENST00000395131 SPG7Q9UQ90 795 aa19.53■□□□□ 0.72
PFDN6-204ENST00000395131 DDR1Q08345 913 aa19.52■□□□□ 0.72
PFDN6-204ENST00000395131 DPY19L2Q6NUT2 758 aa19.52■□□□□ 0.72
PFDN6-204ENST00000395131 PASKQ96RG2 1323 aa19.51■□□□□ 0.71
PFDN6-204ENST00000395131 FLT4P35916 1363 aa19.5■□□□□ 0.71
PFDN6-204ENST00000395131 VEGFBP49765 207 aa19.5■□□□□ 0.71
PFDN6-204ENST00000395131 HSPA8P11142 646 aaKnown RBP19.49■□□□□ 0.71
PFDN6-204ENST00000395131 FKBP8Q14318 412 aa19.49■□□□□ 0.71
PFDN6-204ENST00000395131 TM4SF1P30408 202 aa19.48■□□□□ 0.71
PFDN6-204ENST00000395131 USP42Q9H9J4 1324 aaKnown RBP19.48■□□□□ 0.71
PFDN6-204ENST00000395131 TONSLQ96HA7 1378 aa19.47■□□□□ 0.71
PFDN6-204ENST00000395131 POLRMTO00411 1230 aaKnown RBP19.47■□□□□ 0.71
PFDN6-204ENST00000395131 PHKG2P15735 406 aa19.47■□□□□ 0.71
PFDN6-204ENST00000395131 IFNL2Q8IZJ0 200 aa19.47■□□□□ 0.71
PFDN6-204ENST00000395131 AFDNP55196 1824 aaKnown RBP19.46■□□□□ 0.71
PFDN6-204ENST00000395131 NFKBIEO00221 500 aa19.46■□□□□ 0.71
PFDN6-204ENST00000395131 FYB1O15117 783 aa19.46■□□□□ 0.71
PFDN6-204ENST00000395131 ADAMTS7Q9UKP4 1686 aa19.46■□□□□ 0.71
PFDN6-204ENST00000395131 NRXN2Q9P2S2 1712 aa19.45■□□□□ 0.7
PFDN6-204ENST00000395131 SRP68Q9UHB9 627 aaKnown RBP19.45■□□□□ 0.7
PFDN6-204ENST00000395131 CCDC85CA6NKD9 419 aa19.44■□□□□ 0.7
PFDN6-204ENST00000395131 TMEM88BA6NKF7 163 aa19.44■□□□□ 0.7
PFDN6-204ENST00000395131 POTEIP0CG38 1075 aa19.44■□□□□ 0.7
PFDN6-204ENST00000395131 POTEJP0CG39 1038 aa19.44■□□□□ 0.7
PFDN6-204ENST00000395131 TTLL6Q8N841 843 aa19.44■□□□□ 0.7
PFDN6-204ENST00000395131 RBM42Q9BTD8 480 aaKnown RBP19.44■□□□□ 0.7
PFDN6-204ENST00000395131 FER1L6Q2WGJ9 1857 aa19.43■□□□□ 0.7
PFDN6-204ENST00000395131 SCN4AP35499 1836 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms