RNA–Protein interactions for RNA: ENST00000394801.8

UBE2D3-207, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,368 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-207ENST00000394801 MST1RQ04912 1400 aa19.02■□□□□ 0.63
UBE2D3-207ENST00000394801 AKAP4Q5JQC9 854 aa19.01■□□□□ 0.63
UBE2D3-207ENST00000394801 IL27Q8NEV9 243 aa19.01■□□□□ 0.63
UBE2D3-207ENST00000394801 LMO7Q8WWI1 1683 aa19.01■□□□□ 0.63
UBE2D3-207ENST00000394801 NCOA3Q9Y6Q9 1424 aa19.01■□□□□ 0.63
UBE2D3-207ENST00000394801 RGPD2P0DJD1 1756 aa19.01■□□□□ 0.63
UBE2D3-207ENST00000394801 TRPM3Q9HCF6 1732 aaPredicted RBP19.01■□□□□ 0.63
UBE2D3-207ENST00000394801 AMOTQ4VCS5 1084 aa19.01■□□□□ 0.63
UBE2D3-207ENST00000394801 CHMP4AQ9BY43 222 aa19.01■□□□□ 0.63
UBE2D3-207ENST00000394801 OSBPL3Q9H4L5 887 aa19.01■□□□□ 0.63
UBE2D3-207ENST00000394801 LGR6Q9HBX8 967 aa19.01■□□□□ 0.63
UBE2D3-207ENST00000394801 EIF4A1P60842 406 aaKnown RBP19■□□□□ 0.63
UBE2D3-207ENST00000394801 PLEKHO1Q53GL0 409 aaPredicted RBP19■□□□□ 0.63
UBE2D3-207ENST00000394801 KDM3BQ7LBC6 1761 aa19■□□□□ 0.63
UBE2D3-207ENST00000394801 HDGFL1Q5TGJ6 251 aa19■□□□□ 0.63
UBE2D3-207ENST00000394801 OTUD7AQ8TE49 926 aaPredicted RBP19■□□□□ 0.63
UBE2D3-207ENST00000394801 SMARCA5O60264 1052 aaPredicted RBP18.99■□□□□ 0.63
UBE2D3-207ENST00000394801 PROSER2Q86WR7 435 aaPredicted RBP18.99■□□□□ 0.63
UBE2D3-207ENST00000394801 LRRC59Q96AG4 307 aaKnown RBP18.99■□□□□ 0.63
UBE2D3-207ENST00000394801 CHMP5Q9NZZ3 219 aa18.99■□□□□ 0.63
UBE2D3-207ENST00000394801 ATP8B2P98198 1209 aa18.99■□□□□ 0.63
UBE2D3-207ENST00000394801 NECTIN2Q92692 538 aa18.99■□□□□ 0.63
UBE2D3-207ENST00000394801 C19orf44Q9H6X5 657 aa18.99■□□□□ 0.63
UBE2D3-207ENST00000394801 KIF1AQ12756 1690 aa18.99■□□□□ 0.63
UBE2D3-207ENST00000394801 C1orf167Q5SNV9 1468 aa18.98■□□□□ 0.63
UBE2D3-207ENST00000394801 KRT28Q7Z3Y7 464 aa18.98■□□□□ 0.63
UBE2D3-207ENST00000394801 CAMTA1Q9Y6Y1 1673 aa18.97■□□□□ 0.63
UBE2D3-207ENST00000394801 OVOS2A0A0G2JMS6 1433 aa18.97■□□□□ 0.63
UBE2D3-207ENST00000394801 SDSP20132 328 aa18.97■□□□□ 0.63
UBE2D3-207ENST00000394801 DDIT3P35638 169 aa18.97■□□□□ 0.63
UBE2D3-207ENST00000394801 XPCQ01831 940 aaPredicted RBP18.97■□□□□ 0.63
UBE2D3-207ENST00000394801 ZNF530Q6P9A1 599 aaPredicted RBP18.97■□□□□ 0.63
UBE2D3-207ENST00000394801 USP44Q9H0E7 712 aa18.97■□□□□ 0.63
UBE2D3-207ENST00000394801 ZBTB7CA1YPR0 619 aa18.96■□□□□ 0.63
UBE2D3-207ENST00000394801 ANKRD24Q8TF21 1146 aa18.96■□□□□ 0.63
UBE2D3-207ENST00000394801 PHAXQ9H814 394 aaKnown RBP18.96■□□□□ 0.63
UBE2D3-207ENST00000394801 TEFQ10587 303 aa18.95■□□□□ 0.62
UBE2D3-207ENST00000394801 SPRYD3Q8NCJ5 442 aa18.95■□□□□ 0.62
UBE2D3-207ENST00000394801 FBXO41Q8TF61 875 aa18.95■□□□□ 0.62
UBE2D3-207ENST00000394801 SALL3Q9BXA9 1300 aa18.95■□□□□ 0.62
UBE2D3-207ENST00000394801 LMTK3Q96Q04 1460 aa18.95■□□□□ 0.62
UBE2D3-207ENST00000394801 APBB1O00213 710 aa18.95■□□□□ 0.62
UBE2D3-207ENST00000394801 PDE1AP54750 535 aa18.95■□□□□ 0.62
UBE2D3-207ENST00000394801 PNMA6EA0A0J9YXQ4 647 aa18.94■□□□□ 0.62
UBE2D3-207ENST00000394801 RNMTO43148 476 aaKnown RBP18.94■□□□□ 0.62
UBE2D3-207ENST00000394801 USP26Q9BXU7 913 aa18.94■□□□□ 0.62
UBE2D3-207ENST00000394801 AXIN2Q9Y2T1 843 aa18.94■□□□□ 0.62
UBE2D3-207ENST00000394801 BTBD11A6QL63 1104 aa18.93■□□□□ 0.62
UBE2D3-207ENST00000394801 ANO8Q9HCE9 1232 aaPredicted RBP18.93■□□□□ 0.62
UBE2D3-207ENST00000394801 MPRIPQ6WCQ1 1025 aa18.93■□□□□ 0.62
UBE2D3-207ENST00000394801 IBTKQ9P2D0 1353 aaPredicted RBP18.93■□□□□ 0.62
UBE2D3-207ENST00000394801 CASC1Q6TDU7 716 aa18.92■□□□□ 0.62
UBE2D3-207ENST00000394801 LRRCC1Q9C099 1032 aa18.92■□□□□ 0.62
UBE2D3-207ENST00000394801 EXOC6BQ9Y2D4 811 aa18.92■□□□□ 0.62
UBE2D3-207ENST00000394801 LRRFIP2Q9Y608 721 aaKnown RBP18.92■□□□□ 0.62
UBE2D3-207ENST00000394801 ALS2Q96Q42 1657 aa18.92■□□□□ 0.62
UBE2D3-207ENST00000394801 KCNQ3O43525 872 aa18.92■□□□□ 0.62
UBE2D3-207ENST00000394801 C1orf141Q5JVX7 400 aa18.92■□□□□ 0.62
UBE2D3-207ENST00000394801 LMOD2Q6P5Q4 547 aa18.92■□□□□ 0.62
UBE2D3-207ENST00000394801 HEG1Q9ULI3 1381 aa18.92■□□□□ 0.62
UBE2D3-207ENST00000394801 PXDNQ92626 1479 aa18.91■□□□□ 0.62
UBE2D3-207ENST00000394801 UBTFL1P0CB47 393 aaPredicted RBP18.91■□□□□ 0.62
UBE2D3-207ENST00000394801 EIF2S2P20042 333 aaKnown RBP18.91■□□□□ 0.62
UBE2D3-207ENST00000394801 SRCIN1Q9C0H9 1055 aa18.91■□□□□ 0.62
UBE2D3-207ENST00000394801 CIZ1Q9ULV3 898 aaPredicted RBP18.91■□□□□ 0.62
UBE2D3-207ENST00000394801 SSH3Q8TE77 659 aa18.91■□□□□ 0.62
UBE2D3-207ENST00000394801 CHPF2Q9P2E5 772 aa18.91■□□□□ 0.62
UBE2D3-207ENST00000394801 K7ELQ4 463 aaPredicted RBP18.9■□□□□ 0.62
UBE2D3-207ENST00000394801 CD2BP2O95400 341 aaKnown RBP18.9■□□□□ 0.62
UBE2D3-207ENST00000394801 MCM4P33991 863 aa18.9■□□□□ 0.62
UBE2D3-207ENST00000394801 DCCP43146 1447 aa18.9■□□□□ 0.62
UBE2D3-207ENST00000394801 ADAMTS7Q9UKP4 1686 aa18.9■□□□□ 0.62
UBE2D3-207ENST00000394801 ERBB3P21860 1342 aa18.89■□□□□ 0.61
UBE2D3-207ENST00000394801 RABEP1Q15276 862 aa18.89■□□□□ 0.61
UBE2D3-207ENST00000394801 RBM42Q9BTD8 480 aaKnown RBP18.89■□□□□ 0.61
UBE2D3-207ENST00000394801 HSP90AB1P08238 724 aaKnown RBP18.89■□□□□ 0.61
UBE2D3-207ENST00000394801 BEND3Q5T5X7 828 aa18.89■□□□□ 0.61
UBE2D3-207ENST00000394801 DNAAF4Q8WXU2 420 aa18.89■□□□□ 0.61
UBE2D3-207ENST00000394801 STAP2Q9UGK3 403 aa18.89■□□□□ 0.61
UBE2D3-207ENST00000394801 POLA2Q14181 598 aa18.88■□□□□ 0.61
UBE2D3-207ENST00000394801 DBF4Q9UBU7 674 aaPredicted RBP18.88■□□□□ 0.61
UBE2D3-207ENST00000394801 PI4KAP2A4QPH2 592 aa18.87■□□□□ 0.61
UBE2D3-207ENST00000394801 GIGYF1O75420 1035 aaPredicted RBP18.87■□□□□ 0.61
UBE2D3-207ENST00000394801 REC8O95072 547 aa18.87■□□□□ 0.61
UBE2D3-207ENST00000394801 PRKCSHP14314 528 aaPredicted RBP18.87■□□□□ 0.61
UBE2D3-207ENST00000394801 PI4KAP1Q8N8J0 262 aa18.87■□□□□ 0.61
UBE2D3-207ENST00000394801 TUBGCP6Q96RT7 1819 aa18.87■□□□□ 0.61
UBE2D3-207ENST00000394801 SIPA1L3O60292 1781 aaPredicted RBP18.87■□□□□ 0.61
UBE2D3-207ENST00000394801 ATF3P18847 181 aa18.86■□□□□ 0.61
UBE2D3-207ENST00000394801 MX1P20591 662 aa18.86■□□□□ 0.61
UBE2D3-207ENST00000394801 RGPD5Q99666 1765 aa18.86■□□□□ 0.61
UBE2D3-207ENST00000394801 ERC2O15083 957 aa18.86■□□□□ 0.61
UBE2D3-207ENST00000394801 TMEM94Q12767 1356 aa18.86■□□□□ 0.61
UBE2D3-207ENST00000394801 RAB11FIP3O75154 756 aa18.85■□□□□ 0.61
UBE2D3-207ENST00000394801 ADCY9O60503 1353 aa18.85■□□□□ 0.61
UBE2D3-207ENST00000394801 AOX1Q06278 1338 aa18.85■□□□□ 0.61
UBE2D3-207ENST00000394801 RTN4Q9NQC3 1192 aaKnown RBP18.85■□□□□ 0.61
UBE2D3-207ENST00000394801 PPP1R42Q7Z4L9 355 aa18.84■□□□□ 0.61
UBE2D3-207ENST00000394801 PLEKHG5O94827 1062 aa18.84■□□□□ 0.61
UBE2D3-207ENST00000394801 ZC3H6P61129 1189 aaKnown RBP18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms