RNA–Protein interactions for RNA: ENST00000394611.6

RTN4-206, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,161 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-206ENST00000394611 NSD3Q9BZ95 1437 aa10.66□□□□□ -0.7
RTN4-206ENST00000394611 OFD1O75665 1012 aa10.66□□□□□ -0.7
RTN4-206ENST00000394611 GIMAP6Q6P9H5 292 aa10.66□□□□□ -0.7
RTN4-206ENST00000394611 FAM177A1Q8N128 213 aaPredicted RBP10.66□□□□□ -0.7
RTN4-206ENST00000394611 TRIM5Q9C035 493 aa10.66□□□□□ -0.7
RTN4-206ENST00000394611 LTBP4Q8N2S1 1624 aa10.66□□□□□ -0.7
RTN4-206ENST00000394611 REC8O95072 547 aa10.66□□□□□ -0.7
RTN4-206ENST00000394611 TWISTNBQ3B726 338 aaPredicted RBP10.66□□□□□ -0.7
RTN4-206ENST00000394611 KIF3AQ9Y496 699 aa10.66□□□□□ -0.7
RTN4-206ENST00000394611 FSD2A1L4K1 749 aa10.66□□□□□ -0.7
RTN4-206ENST00000394611 CREBRFQ8IUR6 639 aa10.66□□□□□ -0.7
RTN4-206ENST00000394611 BICD2Q8TD16 824 aa10.66□□□□□ -0.7
RTN4-206ENST00000394611 SBNO2Q9Y2G9 1366 aa10.66□□□□□ -0.7
RTN4-206ENST00000394611 KLHL40Q2TBA0 621 aa10.66□□□□□ -0.7
RTN4-206ENST00000394611 FILIP1Q7Z7B0 1213 aa10.66□□□□□ -0.7
RTN4-206ENST00000394611 TSPYL6Q8N831 410 aa10.66□□□□□ -0.7
RTN4-206ENST00000394611 RTF1Q92541 710 aaKnown RBP10.66□□□□□ -0.7
RTN4-206ENST00000394611 U2AF2P26368 475 aaKnown RBP eCLIP10.65□□□□□ -0.77e-8■■□□□ 13
RTN4-206ENST00000394611 GNL2Q13823 731 aaKnown RBP10.65□□□□□ -0.7
RTN4-206ENST00000394611 RAB3GAP1Q15042 981 aa10.65□□□□□ -0.7
RTN4-206ENST00000394611 RABEP1Q15276 862 aa10.65□□□□□ -0.7
RTN4-206ENST00000394611 ADGRL3Q9HAR2 1447 aa10.65□□□□□ -0.7
RTN4-206ENST00000394611 RRS1Q15050 365 aaKnown RBP10.65□□□□□ -0.7
RTN4-206ENST00000394611 SASS6Q6UVJ0 657 aa10.65□□□□□ -0.7
RTN4-206ENST00000394611 SYTL4Q96C24 671 aaPredicted RBP10.65□□□□□ -0.7
RTN4-206ENST00000394611 C19orf44Q9H6X5 657 aa10.65□□□□□ -0.7
RTN4-206ENST00000394611 TRMT1Q9NXH9 659 aaKnown RBP10.65□□□□□ -0.7
RTN4-206ENST00000394611 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.65□□□□□ -0.75e-9■■■□□ 14.6
RTN4-206ENST00000394611 ADCY5O95622 1261 aa10.65□□□□□ -0.71
RTN4-206ENST00000394611 FKBP5Q13451 457 aaPredicted RBP10.65□□□□□ -0.71
RTN4-206ENST00000394611 TPD52L1Q16890 204 aaPredicted RBP10.65□□□□□ -0.71
RTN4-206ENST00000394611 HDGFL2Q7Z4V5 671 aaPredicted RBP10.65□□□□□ -0.71
RTN4-206ENST00000394611 TCEANC2Q96MN5 208 aa10.65□□□□□ -0.71
RTN4-206ENST00000394611 NSFL1CQ9UNZ2 370 aaKnown RBP10.65□□□□□ -0.71
RTN4-206ENST00000394611 TMX1Q9H3N1 280 aa10.64□□□□□ -0.71
RTN4-206ENST00000394611 SMC3Q9UQE7 1217 aa10.64□□□□□ -0.71
RTN4-206ENST00000394611 PRR36Q9H6K5 1346 aa10.64□□□□□ -0.71
RTN4-206ENST00000394611 PHF14O94880 888 aa10.64□□□□□ -0.71
RTN4-206ENST00000394611 MAP7D2Q96T17 732 aa10.64□□□□□ -0.71
RTN4-206ENST00000394611 CPA1P15085 419 aa10.63□□□□□ -0.71
RTN4-206ENST00000394611 CHMP4BQ9H444 224 aaKnown RBP10.63□□□□□ -0.71
RTN4-206ENST00000394611 TMEM63CQ9P1W3 806 aa10.63□□□□□ -0.71
RTN4-206ENST00000394611 ZKSCAN5Q9Y2L8 839 aa10.63□□□□□ -0.71
RTN4-206ENST00000394611 A0A0G2JS52 829 aa10.63□□□□□ -0.71
RTN4-206ENST00000394611 ZBTB22O15209 634 aa10.63□□□□□ -0.71
RTN4-206ENST00000394611 ATF3P18847 181 aa10.63□□□□□ -0.71
RTN4-206ENST00000394611 NUDT16Q96DE0 195 aaKnown RBP10.63□□□□□ -0.71
RTN4-206ENST00000394611 MSH6P52701 1360 aa10.63□□□□□ -0.71
RTN4-206ENST00000394611 TULP1O00294 542 aaPredicted RBP10.63□□□□□ -0.71
RTN4-206ENST00000394611 NUTM2GQ5VZR2 741 aa10.63□□□□□ -0.71
RTN4-206ENST00000394611 NUTM1Q86Y26 1132 aa10.63□□□□□ -0.71
RTN4-206ENST00000394611 DHX37Q8IY37 1157 aaKnown RBP10.63□□□□□ -0.71
RTN4-206ENST00000394611 NGEFQ8N5V2 710 aa10.63□□□□□ -0.71
RTN4-206ENST00000394611 RGPD8O14715 1765 aaPredicted RBP10.62□□□□□ -0.71
RTN4-206ENST00000394611 BECN2A8MW95 431 aa10.62□□□□□ -0.71
RTN4-206ENST00000394611 GADD45BO75293 160 aaPredicted RBP10.62□□□□□ -0.71
RTN4-206ENST00000394611 ADGRB2O60241 1585 aa10.62□□□□□ -0.71
RTN4-206ENST00000394611 MCM10Q7L590 875 aa10.62□□□□□ -0.71
RTN4-206ENST00000394611 CABP1Q9NZU7 370 aa10.62□□□□□ -0.71
RTN4-206ENST00000394611 TFIP11Q9UBB9 837 aaKnown RBP10.62□□□□□ -0.71
RTN4-206ENST00000394611 CIZ1Q9ULV3 898 aaPredicted RBP10.62□□□□□ -0.71
RTN4-206ENST00000394611 GOLGA6L6A8MZA4 724 aa10.61□□□□□ -0.71
RTN4-206ENST00000394611 FAM173BQ6P4H8 233 aa10.61□□□□□ -0.71
RTN4-206ENST00000394611 SLC4A2P04920 1241 aa10.61□□□□□ -0.71
RTN4-206ENST00000394611 HOMER1Q86YM7 354 aa10.61□□□□□ -0.71
RTN4-206ENST00000394611 CNPY2Q9Y2B0 182 aa10.61□□□□□ -0.71
RTN4-206ENST00000394611 GOLGA6L19H0YKK7 550 aa10.61□□□□□ -0.71
RTN4-206ENST00000394611 HMMRO75330 724 aa10.61□□□□□ -0.71
RTN4-206ENST00000394611 ORAI2Q96SN7 254 aa10.61□□□□□ -0.71
RTN4-206ENST00000394611 STK31Q9BXU1 1019 aa10.61□□□□□ -0.71
RTN4-206ENST00000394611 CDC42BPGQ6DT37 1551 aa10.6□□□□□ -0.71
RTN4-206ENST00000394611 WDR63Q8IWG1 891 aa10.6□□□□□ -0.71
RTN4-206ENST00000394611 USP32Q8NFA0 1604 aa10.6□□□□□ -0.71
RTN4-206ENST00000394611 NOLC1Q14978 699 aaKnown RBP eCLIP10.6□□□□□ -0.718e-8■□□□□ 10
RTN4-206ENST00000394611 ESCO1Q5FWF5 840 aa10.6□□□□□ -0.71
RTN4-206ENST00000394611 CWC27Q6UX04 472 aaKnown RBP10.6□□□□□ -0.71
RTN4-206ENST00000394611 CCDC83Q8IWF9 413 aa10.6□□□□□ -0.71
RTN4-206ENST00000394611 TERF2IPQ9NYB0 399 aa10.6□□□□□ -0.71
RTN4-206ENST00000394611 FMN2Q9NZ56 1722 aa10.6□□□□□ -0.71
RTN4-206ENST00000394611 NCOA3Q9Y6Q9 1424 aa10.6□□□□□ -0.71
RTN4-206ENST00000394611 SDSP20132 328 aa10.6□□□□□ -0.71
RTN4-206ENST00000394611 ATP7BP35670 1465 aa10.6□□□□□ -0.71
RTN4-206ENST00000394611 NUCB1Q02818 461 aa10.59□□□□□ -0.71
RTN4-206ENST00000394611 CADPS2Q86UW7 1296 aa10.59□□□□□ -0.71
RTN4-206ENST00000394611 SPG7Q9UQ90 795 aa10.59□□□□□ -0.71
RTN4-206ENST00000394611 POLR3GO15318 223 aaPredicted RBP10.59□□□□□ -0.71
RTN4-206ENST00000394611 MBD3O95983 291 aa10.59□□□□□ -0.71
RTN4-206ENST00000394611 TTLL5Q6EMB2 1281 aa10.59□□□□□ -0.71
RTN4-206ENST00000394611 TMX3Q96JJ7 454 aa10.59□□□□□ -0.71
RTN4-206ENST00000394611 CCDC61Q9Y6R9 512 aa10.59□□□□□ -0.71
RTN4-206ENST00000394611 PPIP5K1Q6PFW1 1433 aa10.59□□□□□ -0.71
RTN4-206ENST00000394611 ERC2O15083 957 aa10.59□□□□□ -0.71
RTN4-206ENST00000394611 SMC5Q8IY18 1101 aa10.58□□□□□ -0.71
RTN4-206ENST00000394611 ZNF330Q9Y3S2 320 aaPredicted RBP10.58□□□□□ -0.71
RTN4-206ENST00000394611 EMILIN1Q9Y6C2 1016 aa10.58□□□□□ -0.71
RTN4-206ENST00000394611 SURF6O75683 361 aaKnown RBP10.58□□□□□ -0.72
RTN4-206ENST00000394611 GPT2Q8TD30 523 aa10.58□□□□□ -0.72
RTN4-206ENST00000394611 DIAPH3Q9NSV4 1193 aa10.58□□□□□ -0.72
RTN4-206ENST00000394611 MST1RQ04912 1400 aa10.58□□□□□ -0.72
RTN4-206ENST00000394611 MYOM1P52179 1685 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms