RNA–Protein interactions for RNA: ENST00000394320.7

PPARGC1B-203, Transcript of PPARG coactivator 1 beta, humanhuman

TSL 1 (best) BASIC

Gene PPARGC1B, Length 4,803 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1B-203ENST00000394320 MAPKBP1O60336 1514 aa17.07■□□□□ 0.32
PPARGC1B-203ENST00000394320 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.07■□□□□ 0.32
PPARGC1B-203ENST00000394320 PPIP5K1Q6PFW1 1433 aa17.07■□□□□ 0.32
PPARGC1B-203ENST00000394320 FIBPO43427 364 aa17.07■□□□□ 0.32
PPARGC1B-203ENST00000394320 PRPF40AO75400 957 aaKnown RBP17.07■□□□□ 0.32
PPARGC1B-203ENST00000394320 POLR3AO14802 1390 aaPredicted RBP17.06■□□□□ 0.32
PPARGC1B-203ENST00000394320 OFD1O75665 1012 aa17.06■□□□□ 0.32
PPARGC1B-203ENST00000394320 AMER1Q5JTC6 1135 aaPredicted RBP17.06■□□□□ 0.32
PPARGC1B-203ENST00000394320 CAVIN1Q6NZI2 390 aaKnown RBP17.06■□□□□ 0.32
PPARGC1B-203ENST00000394320 TMOD2Q9NZR1 351 aa17.06■□□□□ 0.32
PPARGC1B-203ENST00000394320 IDH1O75874 414 aaKnown RBP17.06■□□□□ 0.32
PPARGC1B-203ENST00000394320 ATP2B1P20020 1258 aa17.06■□□□□ 0.32
PPARGC1B-203ENST00000394320 CCP110O43303 1012 aa17.05■□□□□ 0.32
PPARGC1B-203ENST00000394320 CCAR1Q8IX12 1150 aaKnown RBP17.05■□□□□ 0.32
PPARGC1B-203ENST00000394320 FAM13BQ9NYF5 915 aa17.05■□□□□ 0.32
PPARGC1B-203ENST00000394320 HMGB1P09429 215 aaKnown RBP17.05■□□□□ 0.32
PPARGC1B-203ENST00000394320 SNRPA1P09661 255 aaKnown RBP17.05■□□□□ 0.32
PPARGC1B-203ENST00000394320 TRIM27P14373 513 aa17.05■□□□□ 0.32
PPARGC1B-203ENST00000394320 ZNF592Q92610 1267 aa17.05■□□□□ 0.32
PPARGC1B-203ENST00000394320 NGLY1Q96IV0 654 aa17.05■□□□□ 0.32
PPARGC1B-203ENST00000394320 A0A087WZG4 1122 aa17.04■□□□□ 0.32
PPARGC1B-203ENST00000394320 ANKRD18BA2A2Z9 1011 aa17.04■□□□□ 0.32
PPARGC1B-203ENST00000394320 MAP4K4O95819 1239 aaPredicted RBP17.04■□□□□ 0.32
PPARGC1B-203ENST00000394320 CCDC192P0DO97 292 aa17.04■□□□□ 0.32
PPARGC1B-203ENST00000394320 SLC5A1P13866 664 aa17.04■□□□□ 0.32
PPARGC1B-203ENST00000394320 NUTM1Q86Y26 1132 aa17.04■□□□□ 0.32
PPARGC1B-203ENST00000394320 MAGEC2Q9UBF1 373 aaPredicted RBP17.04■□□□□ 0.32
PPARGC1B-203ENST00000394320 ZFYVE9O95405 1425 aa17.04■□□□□ 0.32
PPARGC1B-203ENST00000394320 MAP3K12Q12852 859 aa17.04■□□□□ 0.32
PPARGC1B-203ENST00000394320 STIM1Q13586 685 aa17.04■□□□□ 0.32
PPARGC1B-203ENST00000394320 SMARCE1Q969G3 411 aa17.04■□□□□ 0.32
PPARGC1B-203ENST00000394320 TRMT112Q9UI30 125 aaKnown RBP17.04■□□□□ 0.32
PPARGC1B-203ENST00000394320 TRPM2O94759 1503 aa17.04■□□□□ 0.32
PPARGC1B-203ENST00000394320 PLEKHH1Q9ULM0 1364 aa17.03■□□□□ 0.32
PPARGC1B-203ENST00000394320 TRIM5Q9C035 493 aa17.03■□□□□ 0.32
PPARGC1B-203ENST00000394320 MBIPQ9NS73 344 aa17.03■□□□□ 0.32
PPARGC1B-203ENST00000394320 ADGRL2O95490 1459 aa17.03■□□□□ 0.32
PPARGC1B-203ENST00000394320 DNMT1P26358 1616 aaKnown RBP17.03■□□□□ 0.32
PPARGC1B-203ENST00000394320 SH2B1Q9NRF2 756 aaPredicted RBP17.03■□□□□ 0.32
PPARGC1B-203ENST00000394320 TBX22Q9Y458 520 aa17.03■□□□□ 0.32
PPARGC1B-203ENST00000394320 PDE4CQ08493 712 aa17.03■□□□□ 0.32
PPARGC1B-203ENST00000394320 LRRFIP2Q9Y608 721 aaKnown RBP17.03■□□□□ 0.32
PPARGC1B-203ENST00000394320 DISP1Q96F81 1524 aa17.02■□□□□ 0.32
PPARGC1B-203ENST00000394320 PARD3Q8TEW0 1356 aa17.02■□□□□ 0.32
PPARGC1B-203ENST00000394320 ADAMTS2O95450 1211 aa17.02■□□□□ 0.32
PPARGC1B-203ENST00000394320 BICDL1Q6ZP65 573 aa17.02■□□□□ 0.32
PPARGC1B-203ENST00000394320 CCDC196A0A1B0GTZ2 297 aa17.02■□□□□ 0.32
PPARGC1B-203ENST00000394320 SLF2Q8IX21 1173 aa17.02■□□□□ 0.32
PPARGC1B-203ENST00000394320 NUP133Q8WUM0 1156 aa17.02■□□□□ 0.32
PPARGC1B-203ENST00000394320 ME1P48163 572 aa17.02■□□□□ 0.31
PPARGC1B-203ENST00000394320 ATP2B2Q01814 1243 aa17.02■□□□□ 0.31
PPARGC1B-203ENST00000394320 CWC25Q9NXE8 425 aaPredicted RBP17.02■□□□□ 0.31
PPARGC1B-203ENST00000394320 FLT4P35916 1363 aa17.01■□□□□ 0.31
PPARGC1B-203ENST00000394320 UHRF1BP1Q6BDS2 1440 aa17.01■□□□□ 0.31
PPARGC1B-203ENST00000394320 KRT18P05783 430 aaKnown RBP17.01■□□□□ 0.31
PPARGC1B-203ENST00000394320 STK3Q13188 491 aa17.01■□□□□ 0.31
PPARGC1B-203ENST00000394320 FAM43AQ8N2R8 423 aa17.01■□□□□ 0.31
PPARGC1B-203ENST00000394320 RBM5P52756 815 aaKnown RBP eCLIP17.01■□□□□ 0.31
PPARGC1B-203ENST00000394320 ARGLU1Q9NWB6 273 aaPredicted RBP17.01■□□□□ 0.31
PPARGC1B-203ENST00000394320 CT47A1Q5JQC4 288 aaPredicted RBP17.01■□□□□ 0.31
PPARGC1B-203ENST00000394320 C19orf44Q9H6X5 657 aa17.01■□□□□ 0.31
PPARGC1B-203ENST00000394320 CDC5LQ99459 802 aaKnown RBP17■□□□□ 0.31
PPARGC1B-203ENST00000394320 ECHDC1Q9NTX5 307 aa17■□□□□ 0.31
PPARGC1B-203ENST00000394320 ABCF2Q9UG63 623 aa17■□□□□ 0.31
PPARGC1B-203ENST00000394320 NPATQ14207 1427 aa17■□□□□ 0.31
PPARGC1B-203ENST00000394320 MNS1Q8NEH6 495 aa17■□□□□ 0.31
PPARGC1B-203ENST00000394320 SOS1Q07889 1333 aaPredicted RBP17■□□□□ 0.31
PPARGC1B-203ENST00000394320 F6X3S4 739 aa17■□□□□ 0.31
PPARGC1B-203ENST00000394320 RNF41Q9H4P4 317 aaPredicted RBP17■□□□□ 0.31
PPARGC1B-203ENST00000394320 PIK3C2GO75747 1445 aa17■□□□□ 0.31
PPARGC1B-203ENST00000394320 TOM1O60784 492 aa17■□□□□ 0.31
PPARGC1B-203ENST00000394320 EVI5LQ96CN4 794 aa17■□□□□ 0.31
PPARGC1B-203ENST00000394320 ACBD3Q9H3P7 528 aa17■□□□□ 0.31
PPARGC1B-203ENST00000394320 TTF1Q15361 905 aaPredicted RBP16.99■□□□□ 0.31
PPARGC1B-203ENST00000394320 AKAP4Q5JQC9 854 aa16.99■□□□□ 0.31
PPARGC1B-203ENST00000394320 TNMDQ9H2S6 317 aa16.99■□□□□ 0.31
PPARGC1B-203ENST00000394320 CEP131Q9UPN4 1083 aa16.99■□□□□ 0.31
PPARGC1B-203ENST00000394320 ZMYM3Q14202 1370 aa16.99■□□□□ 0.31
PPARGC1B-203ENST00000394320 ABCA5Q8WWZ7 1642 aa16.99■□□□□ 0.31
PPARGC1B-203ENST00000394320 PPP1R42Q7Z4L9 355 aa16.99■□□□□ 0.31
PPARGC1B-203ENST00000394320 CASTP20810 708 aaKnown RBP16.99■□□□□ 0.31
PPARGC1B-203ENST00000394320 CCDC173Q0VFZ6 552 aa16.99■□□□□ 0.31
PPARGC1B-203ENST00000394320 PBRM1Q86U86 1689 aa16.98■□□□□ 0.31
PPARGC1B-203ENST00000394320 BMP2KLQ5H9B9 411 aa16.98■□□□□ 0.31
PPARGC1B-203ENST00000394320 ZSCAN29Q8IWY8 852 aaPredicted RBP16.98■□□□□ 0.31
PPARGC1B-203ENST00000394320 SPATA32Q96LK8 384 aa16.98■□□□□ 0.31
PPARGC1B-203ENST00000394320 MAP3K2Q9Y2U5 619 aa16.98■□□□□ 0.31
PPARGC1B-203ENST00000394320 ALDH1L1O75891 902 aa16.98■□□□□ 0.31
PPARGC1B-203ENST00000394320 CCDC85AQ96PX6 553 aaPredicted RBP16.98■□□□□ 0.31
PPARGC1B-203ENST00000394320 NAPBQ9H115 298 aa16.98■□□□□ 0.31
PPARGC1B-203ENST00000394320 BMP2KQ9NSY1 1161 aaPredicted RBP16.98■□□□□ 0.31
PPARGC1B-203ENST00000394320 ATP10AO60312 1499 aa16.98■□□□□ 0.31
PPARGC1B-203ENST00000394320 NAP1L1P55209 391 aaKnown RBP16.98■□□□□ 0.31
PPARGC1B-203ENST00000394320 RNF214Q8ND24 703 aa16.98■□□□□ 0.31
PPARGC1B-203ENST00000394320 BOLA2Q9H3K6 86 aa16.98■□□□□ 0.31
PPARGC1B-203ENST00000394320 HSP90AB2PQ58FF8 381 aa16.98■□□□□ 0.31
PPARGC1B-203ENST00000394320 PDILTQ8N807 584 aa16.98■□□□□ 0.31
PPARGC1B-203ENST00000394320 ZCRB1Q8TBF4 217 aaKnown RBP16.98■□□□□ 0.31
PPARGC1B-203ENST00000394320 CDR1P51861 262 aa16.97■□□□□ 0.31
PPARGC1B-203ENST00000394320 TESK2Q96S53 571 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms