RNA–Protein interactions for RNA: ENST00000394196.8

CHD2-201, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CHD2, Length 9,363 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-201ENST00000394196 GBP1P32455 592 aa10.49□□□□□ -0.73
CHD2-201ENST00000394196 PKD2Q13563 968 aa10.49□□□□□ -0.73
CHD2-201ENST00000394196 MAP3K11Q16584 847 aa10.49□□□□□ -0.73
CHD2-201ENST00000394196 PHLDB2Q86SQ0 1253 aa10.49□□□□□ -0.73
CHD2-201ENST00000394196 CAPZA3Q96KX2 299 aa10.49□□□□□ -0.73
CHD2-201ENST00000394196 CCDC171Q6TFL3 1326 aa10.49□□□□□ -0.73
CHD2-201ENST00000394196 PAFAH1B1P43034 410 aa10.49□□□□□ -0.73
CHD2-201ENST00000394196 STK38Q15208 465 aa10.49□□□□□ -0.73
CHD2-201ENST00000394196 SPATS2Q86XZ4 545 aaKnown RBP10.49□□□□□ -0.73
CHD2-201ENST00000394196 RPAP2Q8IXW5 612 aaPredicted RBP10.49□□□□□ -0.73
CHD2-201ENST00000394196 PFDN1O60925 122 aa10.49□□□□□ -0.73
CHD2-201ENST00000394196 UPF3BQ9BZI7 483 aaKnown RBP10.49□□□□□ -0.73
CHD2-201ENST00000394196 BRD4O60885 1362 aaPredicted RBP10.49□□□□□ -0.73
CHD2-201ENST00000394196 CFAP58Q5T655 872 aa10.48□□□□□ -0.73
CHD2-201ENST00000394196 MICALL1Q8N3F8 863 aa10.48□□□□□ -0.73
CHD2-201ENST00000394196 DTNBP1Q96EV8 351 aa10.48□□□□□ -0.73
CHD2-201ENST00000394196 SEC62Q99442 399 aaKnown RBP10.48□□□□□ -0.73
CHD2-201ENST00000394196 WWC3Q9ULE0 1092 aa10.48□□□□□ -0.73
CHD2-201ENST00000394196 ATP11AP98196 1134 aa10.48□□□□□ -0.73
CHD2-201ENST00000394196 ARMC9Q7Z3E5 817 aa10.48□□□□□ -0.73
CHD2-201ENST00000394196 KRI1Q8N9T8 703 aaKnown RBP10.48□□□□□ -0.73
CHD2-201ENST00000394196 TRIM4Q9C037 500 aa10.48□□□□□ -0.73
CHD2-201ENST00000394196 VCX3AQ9NNX9 186 aa10.48□□□□□ -0.73
CHD2-201ENST00000394196 CTDP1Q9Y5B0 961 aaPredicted RBP10.48□□□□□ -0.73
CHD2-201ENST00000394196 MVPQ14764 893 aaKnown RBP10.48□□□□□ -0.73
CHD2-201ENST00000394196 PDCD2Q16342 344 aaPredicted RBP10.48□□□□□ -0.73
CHD2-201ENST00000394196 UVSSAQ2YD98 709 aa10.48□□□□□ -0.73
CHD2-201ENST00000394196 NAA16Q6N069 864 aaPredicted RBP10.48□□□□□ -0.73
CHD2-201ENST00000394196 RUFY3Q7L099 469 aa10.48□□□□□ -0.73
CHD2-201ENST00000394196 OTUD6BQ8N6M0 293 aa10.48□□□□□ -0.73
CHD2-201ENST00000394196 PRPF31Q8WWY3 499 aaKnown RBP10.48□□□□□ -0.73
CHD2-201ENST00000394196 WWC2Q6AWC2 1192 aa10.48□□□□□ -0.73
CHD2-201ENST00000394196 SLC8A1P32418 973 aa10.48□□□□□ -0.73
CHD2-201ENST00000394196 GOPCQ9HD26 462 aa10.48□□□□□ -0.73
CHD2-201ENST00000394196 CCDC183Q5T5S1 534 aa10.47□□□□□ -0.73
CHD2-201ENST00000394196 SRCIN1Q9C0H9 1055 aa10.47□□□□□ -0.73
CHD2-201ENST00000394196 LARSQ9P2J5 1176 aaKnown RBP10.47□□□□□ -0.73
CHD2-201ENST00000394196 ZSCAN31Q96LW9 406 aaPredicted RBP10.47□□□□□ -0.73
CHD2-201ENST00000394196 ZFXP17010 805 aaPredicted RBP10.47□□□□□ -0.73
CHD2-201ENST00000394196 CTAGE6Q86UF2 777 aa10.47□□□□□ -0.73
CHD2-201ENST00000394196 CNTLNQ9NXG0 1405 aa10.47□□□□□ -0.73
CHD2-201ENST00000394196 CDKL5O76039 1030 aa10.47□□□□□ -0.73
CHD2-201ENST00000394196 NEK4P51957 841 aa10.47□□□□□ -0.73
CHD2-201ENST00000394196 IFFO1Q0D2I5 559 aa10.47□□□□□ -0.73
CHD2-201ENST00000394196 STMN2Q93045 179 aa10.47□□□□□ -0.73
CHD2-201ENST00000394196 FBXW7Q969H0 707 aa10.47□□□□□ -0.73
CHD2-201ENST00000394196 RUNDC1Q96C34 613 aa10.47□□□□□ -0.73
CHD2-201ENST00000394196 ALS2CR12Q96Q35 445 aa10.47□□□□□ -0.73
CHD2-201ENST00000394196 EHBP1Q8NDI1 1231 aa10.47□□□□□ -0.73
CHD2-201ENST00000394196 STAC3Q96MF2 364 aa10.47□□□□□ -0.73
CHD2-201ENST00000394196 MTUS1Q9ULD2 1270 aa10.47□□□□□ -0.73
CHD2-201ENST00000394196 HSP90AA5PQ58FG0 334 aa10.46□□□□□ -0.73
CHD2-201ENST00000394196 ANAPC4Q9UJX5 808 aa10.46□□□□□ -0.73
CHD2-201ENST00000394196 ITGB1BP2Q9UKP3 347 aa10.46□□□□□ -0.73
CHD2-201ENST00000394196 BTN2A1Q7KYR7 527 aa10.46□□□□□ -0.73
CHD2-201ENST00000394196 UTP14CQ5TAP6 766 aaKnown RBP10.46□□□□□ -0.73
CHD2-201ENST00000394196 KCNH8Q96L42 1107 aa10.46□□□□□ -0.73
CHD2-201ENST00000394196 PLIN1O60240 522 aa10.46□□□□□ -0.73
CHD2-201ENST00000394196 ARFGAP3Q9NP61 516 aa10.46□□□□□ -0.73
CHD2-201ENST00000394196 ANO10Q9NW15 660 aa10.46□□□□□ -0.73
CHD2-201ENST00000394196 SPA17Q15506 151 aa10.46□□□□□ -0.74
CHD2-201ENST00000394196 NBPF3Q9H094 633 aa10.46□□□□□ -0.74
CHD2-201ENST00000394196 RAI14Q9P0K7 980 aa10.46□□□□□ -0.74
CHD2-201ENST00000394196 FIBPO43427 364 aa10.46□□□□□ -0.74
CHD2-201ENST00000394196 OPA1O60313 960 aa10.46□□□□□ -0.74
CHD2-201ENST00000394196 USO1O60763 962 aaKnown RBP10.46□□□□□ -0.74
CHD2-201ENST00000394196 FGFR1OPO95684 399 aaKnown RBP10.46□□□□□ -0.74
CHD2-201ENST00000394196 VPS36Q86VN1 386 aa10.46□□□□□ -0.74
CHD2-201ENST00000394196 GNAI1P63096 354 aa10.45□□□□□ -0.74
CHD2-201ENST00000394196 BRPF1P55201 1214 aaPredicted RBP10.45□□□□□ -0.74
CHD2-201ENST00000394196 TPX2Q9ULW0 747 aaKnown RBP10.45□□□□□ -0.74
CHD2-201ENST00000394196 POTEB3A0JP26 581 aa10.45□□□□□ -0.74
CHD2-201ENST00000394196 POTEBQ6S5H4 581 aa10.45□□□□□ -0.74
CHD2-201ENST00000394196 SLC3A2P08195 630 aaKnown RBP10.45□□□□□ -0.74
CHD2-201ENST00000394196 CTCFLQ8NI51 663 aaPredicted RBP10.45□□□□□ -0.74
CHD2-201ENST00000394196 CNKSR2Q8WXI2 1034 aa10.45□□□□□ -0.74
CHD2-201ENST00000394196 EIF5P55010 431 aaKnown RBP10.45□□□□□ -0.74
CHD2-201ENST00000394196 CEP131Q9UPN4 1083 aa10.45□□□□□ -0.74
CHD2-201ENST00000394196 MGEA5O60502 916 aa10.45□□□□□ -0.74
CHD2-201ENST00000394196 POTEJP0CG39 1038 aa10.45□□□□□ -0.74
CHD2-201ENST00000394196 LNPKQ9C0E8 428 aa10.45□□□□□ -0.74
CHD2-201ENST00000394196 PPP6R1Q9UPN7 881 aa10.45□□□□□ -0.74
CHD2-201ENST00000394196 NUP155O75694 1391 aa10.45□□□□□ -0.74
CHD2-201ENST00000394196 CYP46A1Q9Y6A2 500 aa10.45□□□□□ -0.74
CHD2-201ENST00000394196 HOOK3Q86VS8 718 aa10.44□□□□□ -0.74
CHD2-201ENST00000394196 MAP3K9P80192 1104 aa10.44□□□□□ -0.74
CHD2-201ENST00000394196 CWC25Q9NXE8 425 aaPredicted RBP10.44□□□□□ -0.74
CHD2-201ENST00000394196 ME1P48163 572 aa10.44□□□□□ -0.74
CHD2-201ENST00000394196 TRIM22Q8IYM9 498 aa10.44□□□□□ -0.74
CHD2-201ENST00000394196 GIMAP4Q9NUV9 329 aa10.44□□□□□ -0.74
CHD2-201ENST00000394196 CCDC7Q96M83 1385 aa10.44□□□□□ -0.74
CHD2-201ENST00000394196 CKAP4Q07065 602 aaKnown RBP10.44□□□□□ -0.74
CHD2-201ENST00000394196 RSPH14Q9UHP6 348 aa10.44□□□□□ -0.74
CHD2-201ENST00000394196 MAP4K4O95819 1239 aaPredicted RBP10.44□□□□□ -0.74
CHD2-201ENST00000394196 CEBPZQ03701 1054 aaKnown RBP10.44□□□□□ -0.74
CHD2-201ENST00000394196 KRT32Q14532 448 aa10.44□□□□□ -0.74
CHD2-201ENST00000394196 WASHC2AQ641Q2 1341 aa10.44□□□□□ -0.74
CHD2-201ENST00000394196 WASHC2CQ9Y4E1 1318 aa10.44□□□□□ -0.74
CHD2-201ENST00000394196 SMARCC2Q8TAQ2 1214 aa10.44□□□□□ -0.74
CHD2-201ENST00000394196 CLIP2Q9UDT6 1046 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms