RNA–Protein interactions for RNA: ENST00000393965.7

CCDC142-202, Transcript of coiled-coil domain containing 142, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC142, Length 3,406 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC142-202ENST00000393965 PTPRCP08575 1304 aa17.01■□□□□ 0.31
CCDC142-202ENST00000393965 RBM25P49756 843 aaKnown RBP17.01■□□□□ 0.31
CCDC142-202ENST00000393965 FKBP5Q13451 457 aaPredicted RBP17.01■□□□□ 0.31
CCDC142-202ENST00000393965 DDX17Q92841 729 aaKnown RBP17.01■□□□□ 0.31
CCDC142-202ENST00000393965 FLIIQ13045 1269 aa17.01■□□□□ 0.31
CCDC142-202ENST00000393965 PNMA6EA0A0J9YXQ4 647 aa17■□□□□ 0.31
CCDC142-202ENST00000393965 MAP3K5Q99683 1374 aa17■□□□□ 0.31
CCDC142-202ENST00000393965 NFAT5O94916 1531 aa16.99■□□□□ 0.31
CCDC142-202ENST00000393965 EIF2S2P20042 333 aaKnown RBP16.99■□□□□ 0.31
CCDC142-202ENST00000393965 AK9Q5TCS8 1911 aa16.99■□□□□ 0.31
CCDC142-202ENST00000393965 TTC22Q5TAA0 569 aa16.99■□□□□ 0.31
CCDC142-202ENST00000393965 TRIM44Q96DX7 344 aaPredicted RBP16.99■□□□□ 0.31
CCDC142-202ENST00000393965 CHMP4BQ9H444 224 aaKnown RBP16.99■□□□□ 0.31
CCDC142-202ENST00000393965 DNAJC5Q9H3Z4 198 aa16.98■□□□□ 0.31
CCDC142-202ENST00000393965 MPNDQ8N594 471 aa16.98■□□□□ 0.31
CCDC142-202ENST00000393965 MPRIPQ6WCQ1 1025 aa16.98■□□□□ 0.31
CCDC142-202ENST00000393965 CHAMP1Q96JM3 812 aa16.98■□□□□ 0.31
CCDC142-202ENST00000393965 AXIN2Q9Y2T1 843 aa16.98■□□□□ 0.31
CCDC142-202ENST00000393965 KIF24Q5T7B8 1368 aa16.97■□□□□ 0.31
CCDC142-202ENST00000393965 SDSP20132 328 aa16.97■□□□□ 0.31
CCDC142-202ENST00000393965 L1TD1Q5T7N2 865 aaKnown RBP16.97■□□□□ 0.31
CCDC142-202ENST00000393965 IP6K1Q92551 441 aa16.97■□□□□ 0.31
CCDC142-202ENST00000393965 USP54Q70EL1 1684 aa16.97■□□□□ 0.31
CCDC142-202ENST00000393965 PRAMEF22A3QJZ6 481 aa16.96■□□□□ 0.31
CCDC142-202ENST00000393965 RPAP2Q8IXW5 612 aaPredicted RBP16.96■□□□□ 0.31
CCDC142-202ENST00000393965 TAF7Q15545 349 aaPredicted RBP16.96■□□□□ 0.31
CCDC142-202ENST00000393965 STK31Q9BXU1 1019 aa16.96■□□□□ 0.31
CCDC142-202ENST00000393965 CHMP5Q9NZZ3 219 aa16.96■□□□□ 0.31
CCDC142-202ENST00000393965 PXDNQ92626 1479 aa16.95■□□□□ 0.3
CCDC142-202ENST00000393965 RGPD5Q99666 1765 aa16.95■□□□□ 0.3
CCDC142-202ENST00000393965 CDC45O75419 566 aa16.95■□□□□ 0.3
CCDC142-202ENST00000393965 DTNBO60941 627 aa16.95■□□□□ 0.3
CCDC142-202ENST00000393965 LRRFIP2Q9Y608 721 aaKnown RBP16.95■□□□□ 0.3
CCDC142-202ENST00000393965 ADGRL3Q9HAR2 1447 aa16.94■□□□□ 0.3
CCDC142-202ENST00000393965 ZNF142P52746 1687 aaPredicted RBP16.94■□□□□ 0.3
CCDC142-202ENST00000393965 HSPA2P54652 639 aa16.93■□□□□ 0.3
CCDC142-202ENST00000393965 HDGFL1Q5TGJ6 251 aa16.93■□□□□ 0.3
CCDC142-202ENST00000393965 GCP02774 474 aa16.93■□□□□ 0.3
CCDC142-202ENST00000393965 CCDC30Q5VVM6 783 aa16.93■□□□□ 0.3
CCDC142-202ENST00000393965 PROSER2Q86WR7 435 aaPredicted RBP16.93■□□□□ 0.3
CCDC142-202ENST00000393965 FAM43AQ8N2R8 423 aa16.93■□□□□ 0.3
CCDC142-202ENST00000393965 CHPF2Q9P2E5 772 aa16.92■□□□□ 0.3
CCDC142-202ENST00000393965 ADAMTSL3P82987 1691 aa16.92■□□□□ 0.3
CCDC142-202ENST00000393965 USP44Q9H0E7 712 aa16.92■□□□□ 0.3
CCDC142-202ENST00000393965 CCT4P50991 539 aaKnown RBP16.92■□□□□ 0.3
CCDC142-202ENST00000393965 HAP1P54257 671 aaPredicted RBP16.92■□□□□ 0.3
CCDC142-202ENST00000393965 DDIT3P35638 169 aa16.91■□□□□ 0.3
CCDC142-202ENST00000393965 ZC3H6P61129 1189 aaKnown RBP16.91■□□□□ 0.3
CCDC142-202ENST00000393965 NPHP4O75161 1426 aaPredicted RBP16.91■□□□□ 0.3
CCDC142-202ENST00000393965 HTATSF1O43719 755 aaKnown RBP16.91■□□□□ 0.3
CCDC142-202ENST00000393965 GNAI2P04899 355 aa16.91■□□□□ 0.3
CCDC142-202ENST00000393965 ZNF530Q6P9A1 599 aaPredicted RBP16.91■□□□□ 0.3
CCDC142-202ENST00000393965 EIF4A1P60842 406 aaKnown RBP16.9■□□□□ 0.3
CCDC142-202ENST00000393965 SSFA2P28290 1259 aa16.9■□□□□ 0.3
CCDC142-202ENST00000393965 TNPO1Q92973 898 aaKnown RBP16.9■□□□□ 0.3
CCDC142-202ENST00000393965 IL1RAPL2Q9NP60 686 aa16.9■□□□□ 0.3
CCDC142-202ENST00000393965 CEMIPQ8WUJ3 1361 aa16.9■□□□□ 0.3
CCDC142-202ENST00000393965 PROSER3Q2NL68 480 aa16.9■□□□□ 0.3
CCDC142-202ENST00000393965 NCOA3Q9Y6Q9 1424 aa16.9■□□□□ 0.3
CCDC142-202ENST00000393965 NBPF7P0C2Y1 421 aaPredicted RBP16.89■□□□□ 0.29
CCDC142-202ENST00000393965 PDE1AP54750 535 aa16.89■□□□□ 0.29
CCDC142-202ENST00000393965 UNC5CLQ8IV45 518 aa16.89■□□□□ 0.29
CCDC142-202ENST00000393965 USP26Q9BXU7 913 aa16.89■□□□□ 0.29
CCDC142-202ENST00000393965 ARHGEF25Q86VW2 580 aa16.88■□□□□ 0.29
CCDC142-202ENST00000393965 CABLES1Q8TDN4 633 aa16.88■□□□□ 0.29
CCDC142-202ENST00000393965 ANKRD24Q8TF21 1146 aa16.88■□□□□ 0.29
CCDC142-202ENST00000393965 DDX49Q9Y6V7 483 aaKnown RBP16.88■□□□□ 0.29
CCDC142-202ENST00000393965 SNX21Q969T3 373 aa16.88■□□□□ 0.29
CCDC142-202ENST00000393965 MAP4K4O95819 1239 aaPredicted RBP16.87■□□□□ 0.29
CCDC142-202ENST00000393965 MCTP1Q6DN14 999 aa16.87■□□□□ 0.29
CCDC142-202ENST00000393965 KDM3BQ7LBC6 1761 aa16.87■□□□□ 0.29
CCDC142-202ENST00000393965 BTBD11A6QL63 1104 aa16.87■□□□□ 0.29
CCDC142-202ENST00000393965 IL25Q9H293 177 aa16.87■□□□□ 0.29
CCDC142-202ENST00000393965 GRPEL1Q9HAV7 217 aa16.87■□□□□ 0.29
CCDC142-202ENST00000393965 PI4KAP2A4QPH2 592 aa16.86■□□□□ 0.29
CCDC142-202ENST00000393965 KRT28Q7Z3Y7 464 aa16.86■□□□□ 0.29
CCDC142-202ENST00000393965 PI4KAP1Q8N8J0 262 aa16.86■□□□□ 0.29
CCDC142-202ENST00000393965 TUBGCP6Q96RT7 1819 aa16.86■□□□□ 0.29
CCDC142-202ENST00000393965 GAS2L3Q86XJ1 694 aa16.86■□□□□ 0.29
CCDC142-202ENST00000393965 NUTM1Q86Y26 1132 aa16.86■□□□□ 0.29
CCDC142-202ENST00000393965 CACNA1FO60840 1977 aa16.86■□□□□ 0.29
CCDC142-202ENST00000393965 SALL3Q9BXA9 1300 aa16.86■□□□□ 0.29
CCDC142-202ENST00000393965 ATP8B2P98198 1209 aa16.86■□□□□ 0.29
CCDC142-202ENST00000393965 VSIG10Q8N0Z9 540 aa16.86■□□□□ 0.29
CCDC142-202ENST00000393965 MED1Q15648 1581 aaPredicted RBP16.85■□□□□ 0.29
CCDC142-202ENST00000393965 K7ELQ4 463 aaPredicted RBP16.84■□□□□ 0.29
CCDC142-202ENST00000393965 HMMRO75330 724 aa16.84■□□□□ 0.29
CCDC142-202ENST00000393965 PKP1Q13835 747 aa16.84■□□□□ 0.29
CCDC142-202ENST00000393965 TRPM3Q9HCF6 1732 aaPredicted RBP16.84■□□□□ 0.29
CCDC142-202ENST00000393965 LMO7Q8WWI1 1683 aa16.84■□□□□ 0.29
CCDC142-202ENST00000393965 RNMTO43148 476 aaKnown RBP16.84■□□□□ 0.29
CCDC142-202ENST00000393965 TEFQ10587 303 aa16.84■□□□□ 0.29
CCDC142-202ENST00000393965 SLC39A6Q13433 755 aa16.84■□□□□ 0.29
CCDC142-202ENST00000393965 PPP1R42Q7Z4L9 355 aa16.84■□□□□ 0.29
CCDC142-202ENST00000393965 KCNH5Q8NCM2 988 aa16.84■□□□□ 0.29
CCDC142-202ENST00000393965 UBTFL1P0CB47 393 aaPredicted RBP16.83■□□□□ 0.29
CCDC142-202ENST00000393965 RNF214Q8ND24 703 aa16.83■□□□□ 0.29
CCDC142-202ENST00000393965 RILPL2Q969X0 211 aa16.83■□□□□ 0.29
CCDC142-202ENST00000393965 LRRCC1Q9C099 1032 aa16.83■□□□□ 0.29
CCDC142-202ENST00000393965 PIP4K2AP48426 406 aaPredicted RBP16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 152 ms