RNA–Protein interactions for RNA: ENST00000393820.2

NPM1-203, Transcript of nucleophosmin 1, humanhuman

TSL 1 (best) BASIC

Gene NPM1, Length 1,598 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-203ENST00000393820 ZFYVE16Q7Z3T8 1539 aa7.91□□□□□ -1.14
NPM1-203ENST00000393820 WNT7AO00755 349 aa7.91□□□□□ -1.14
NPM1-203ENST00000393820 CSB-PGBD3P0DP91 1061 aa7.91□□□□□ -1.14
NPM1-203ENST00000393820 VAC14Q08AM6 782 aa7.91□□□□□ -1.14
NPM1-203ENST00000393820 NR6A1Q15406 480 aa7.91□□□□□ -1.14
NPM1-203ENST00000393820 DESI1Q6ICB0 168 aa7.91□□□□□ -1.14
NPM1-203ENST00000393820 CCDC24Q8N4L8 307 aa7.91□□□□□ -1.14
NPM1-203ENST00000393820 MAP10Q9P2G4 905 aa7.91□□□□□ -1.14
NPM1-203ENST00000393820 SCAPERQ9BY12 1400 aa7.9□□□□□ -1.14
NPM1-203ENST00000393820 PTCRAQ6ISU1 281 aaPredicted RBP7.9□□□□□ -1.14
NPM1-203ENST00000393820 UCN2Q96RP3 112 aa7.9□□□□□ -1.14
NPM1-203ENST00000393820 NUDT12Q9BQG2 462 aa7.9□□□□□ -1.14
NPM1-203ENST00000393820 ALG2Q9H553 416 aa7.9□□□□□ -1.14
NPM1-203ENST00000393820 ATP10AO60312 1499 aa7.9□□□□□ -1.14
NPM1-203ENST00000393820 TTC37Q6PGP7 1564 aa7.9□□□□□ -1.15
NPM1-203ENST00000393820 HECW1Q76N89 1606 aa7.9□□□□□ -1.15
NPM1-203ENST00000393820 ZNF518AQ6AHZ1 1483 aa7.89□□□□□ -1.15
NPM1-203ENST00000393820 PALM3A6NDB9 673 aaPredicted RBP7.89□□□□□ -1.15
NPM1-203ENST00000393820 GMPRP36959 345 aa7.89□□□□□ -1.15
NPM1-203ENST00000393820 DHX57Q6P158 1386 aaKnown RBP7.89□□□□□ -1.15
NPM1-203ENST00000393820 LORP23490 312 aaPredicted RBP7.88□□□□□ -1.15
NPM1-203ENST00000393820 CTHP32929 405 aa7.88□□□□□ -1.15
NPM1-203ENST00000393820 PTPRNQ16849 979 aa7.88□□□□□ -1.15
NPM1-203ENST00000393820 IRF7Q92985 503 aa7.88□□□□□ -1.15
NPM1-203ENST00000393820 ZNF428Q96B54 188 aa7.88□□□□□ -1.15
NPM1-203ENST00000393820 NXF1Q9UBU9 619 aaKnown RBP7.88□□□□□ -1.15
NPM1-203ENST00000393820 C9orf84Q5VXU9 1444 aa7.88□□□□□ -1.15
NPM1-203ENST00000393820 CARNS1A5YM72 827 aa7.88□□□□□ -1.15
NPM1-203ENST00000393820 RIMS1Q86UR5 1692 aaKnown RBP7.88□□□□□ -1.15
NPM1-203ENST00000393820 TROQ12816 1431 aaPredicted RBP7.87□□□□□ -1.15
NPM1-203ENST00000393820 YEATS2Q9ULM3 1422 aa7.87□□□□□ -1.15
NPM1-203ENST00000393820 F12P00748 615 aaPredicted RBP7.87□□□□□ -1.15
NPM1-203ENST00000393820 CCNYL3P0C7X3 344 aa7.87□□□□□ -1.15
NPM1-203ENST00000393820 NPAS3Q8IXF0 933 aa7.87□□□□□ -1.15
NPM1-203ENST00000393820 EVA1BQ9NVM1 165 aa7.87□□□□□ -1.15
NPM1-203ENST00000393820 CDK13Q14004 1512 aaKnown RBP7.86□□□□□ -1.15
NPM1-203ENST00000393820 ARHGEF12Q9NZN5 1544 aa7.86□□□□□ -1.15
NPM1-203ENST00000393820 KIF14Q15058 1648 aa7.86□□□□□ -1.15
NPM1-203ENST00000393820 MYO5CQ9NQX4 1742 aa7.86□□□□□ -1.15
NPM1-203ENST00000393820 J3QL48 77 aa7.86□□□□□ -1.15
NPM1-203ENST00000393820 RRBP1Q9P2E9 1410 aaKnown RBP7.86□□□□□ -1.15
NPM1-203ENST00000393820 ARHGAP35Q9NRY4 1499 aa7.86□□□□□ -1.15
NPM1-203ENST00000393820 REREQ9P2R6 1566 aa7.86□□□□□ -1.15
NPM1-203ENST00000393820 SETD1BQ9UPS6 1966 aaKnown RBP7.85□□□□□ -1.15
NPM1-203ENST00000393820 LMOD1P29536 600 aaPredicted RBP7.85□□□□□ -1.15
NPM1-203ENST00000393820 RBM25P49756 843 aaKnown RBP7.85□□□□□ -1.15
NPM1-203ENST00000393820 KCNH2Q12809 1159 aa7.85□□□□□ -1.15
NPM1-203ENST00000393820 CCDC18Q5T9S5 1454 aa7.85□□□□□ -1.15
NPM1-203ENST00000393820 MLH3Q9UHC1 1453 aa7.85□□□□□ -1.15
NPM1-203ENST00000393820 TMEM88BA6NKF7 163 aa7.84□□□□□ -1.15
NPM1-203ENST00000393820 ATG7O95352 703 aa7.84□□□□□ -1.15
NPM1-203ENST00000393820 SOX11P35716 441 aa7.84□□□□□ -1.15
NPM1-203ENST00000393820 KDM5CP41229 1560 aa7.84□□□□□ -1.15
NPM1-203ENST00000393820 SUPT16HQ9Y5B9 1047 aaKnown RBP7.84□□□□□ -1.15
NPM1-203ENST00000393820 FER1L4A9Z1Z3 1794 aa7.84□□□□□ -1.15
NPM1-203ENST00000393820 ARHGAP5Q13017 1502 aa7.84□□□□□ -1.15
NPM1-203ENST00000393820 CASKIN1Q8WXD9 1431 aa7.84□□□□□ -1.15
NPM1-203ENST00000393820 HPS1Q92902 700 aa7.84□□□□□ -1.15
NPM1-203ENST00000393820 MRGPRX2Q96LB1 330 aa7.84□□□□□ -1.15
NPM1-203ENST00000393820 TFIP11Q9UBB9 837 aaKnown RBP7.84□□□□□ -1.15
NPM1-203ENST00000393820 MAFBQ9Y5Q3 323 aaPredicted RBP7.84□□□□□ -1.15
NPM1-203ENST00000393820 IVNS1ABPQ9Y6Y0 642 aa7.84□□□□□ -1.15
NPM1-203ENST00000393820 MLECQ14165 292 aa7.83□□□□□ -1.16
NPM1-203ENST00000393820 AFAP1Q8N556 730 aa7.83□□□□□ -1.16
NPM1-203ENST00000393820 UNC93B1Q9H1C4 597 aa7.83□□□□□ -1.16
NPM1-203ENST00000393820 ESF1Q9H501 851 aaKnown RBP7.83□□□□□ -1.16
NPM1-203ENST00000393820 PREX1Q8TCU6 1659 aa7.83□□□□□ -1.16
NPM1-203ENST00000393820 AGLP35573 1532 aa7.82□□□□□ -1.16
NPM1-203ENST00000393820 CNTLNQ9NXG0 1405 aa7.82□□□□□ -1.16
NPM1-203ENST00000393820 HSPA2P54652 639 aa7.82□□□□□ -1.16
NPM1-203ENST00000393820 TRIM32Q13049 653 aa7.82□□□□□ -1.16
NPM1-203ENST00000393820 SND1Q7KZF4 910 aaKnown RBP eCLIP7.82□□□□□ -1.16
NPM1-203ENST00000393820 UHRF1BP1Q6BDS2 1440 aa7.82□□□□□ -1.16
NPM1-203ENST00000393820 LINC01559Q495D7 138 aa7.81□□□□□ -1.16
NPM1-203ENST00000393820 CCDC27Q2M243 656 aa7.8□□□□□ -1.16
NPM1-203ENST00000393820 KANK4Q5T7N3 995 aaPredicted RBP7.8□□□□□ -1.16
NPM1-203ENST00000393820 BAP1Q92560 729 aa7.8□□□□□ -1.16
NPM1-203ENST00000393820 VRTNQ9H8Y1 702 aa7.8□□□□□ -1.16
NPM1-203ENST00000393820 SIGLEC1Q9BZZ2 1709 aa7.8□□□□□ -1.16
NPM1-203ENST00000393820 CCNB3Q8WWL7 1395 aa7.8□□□□□ -1.16
NPM1-203ENST00000393820 H3BM21 787 aa7.8□□□□□ -1.16
NPM1-203ENST00000393820 FKBPLQ9UIM3 349 aa7.8□□□□□ -1.16
NPM1-203ENST00000393820 FYCO1Q9BQS8 1478 aa7.8□□□□□ -1.16
NPM1-203ENST00000393820 PTPRTO14522 1441 aa7.79□□□□□ -1.16
NPM1-203ENST00000393820 TRAPPC8Q9Y2L5 1435 aa7.79□□□□□ -1.16
NPM1-203ENST00000393820 DIP2CQ9Y2E4 1556 aa7.79□□□□□ -1.16
NPM1-203ENST00000393820 MAP3K1Q13233 1512 aa7.79□□□□□ -1.16
NPM1-203ENST00000393820 PLEKHH2Q8IVE3 1493 aa7.79□□□□□ -1.16
NPM1-203ENST00000393820 TBC1D9Q6ZT07 1266 aa7.79□□□□□ -1.16
NPM1-203ENST00000393820 AMOTL2Q9Y2J4 779 aa7.79□□□□□ -1.16
NPM1-203ENST00000393820 PREX2Q70Z35 1606 aa7.79□□□□□ -1.16
NPM1-203ENST00000393820 ABCC1P33527 1531 aa7.78□□□□□ -1.16
NPM1-203ENST00000393820 SEMA3FQ13275 785 aa7.78□□□□□ -1.16
NPM1-203ENST00000393820 CDCA8Q53HL2 280 aa7.78□□□□□ -1.16
NPM1-203ENST00000393820 NPATQ14207 1427 aa7.78□□□□□ -1.16
NPM1-203ENST00000393820 KIAA1107Q9UPP5 1409 aa7.78□□□□□ -1.16
NPM1-203ENST00000393820 CDC42BPBQ9Y5S2 1711 aa7.78□□□□□ -1.16
NPM1-203ENST00000393820 ATP9BO43861 1147 aa7.77□□□□□ -1.17
NPM1-203ENST00000393820 CEBPAP49715 358 aaPredicted RBP7.77□□□□□ -1.17
NPM1-203ENST00000393820 GNEQ9Y223 722 aaKnown RBP7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms