RNA–Protein interactions for RNA: ENST00000393409.2

PLXNA1-201, Transcript of plexin A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PLXNA1, Length 9,066 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNA1-201ENST00000393409 PHAXQ9H814 394 aaKnown RBP15.19■□□□□ 0.02
PLXNA1-201ENST00000393409 NCOA1Q15788 1441 aa15.19■□□□□ 0.02
PLXNA1-201ENST00000393409 BMP2KQ9NSY1 1161 aaPredicted RBP15.19■□□□□ 0.02
PLXNA1-201ENST00000393409 U3KPZ7 1027 aaPredicted RBP15.19■□□□□ 0.02
PLXNA1-201ENST00000393409 GTF2F1P35269 517 aaKnown RBP eCLIP15.18■□□□□ 0.027e-7■■■■□ 24.7
PLXNA1-201ENST00000393409 ZSCAN23Q3MJ62 389 aa15.18■□□□□ 0.02
PLXNA1-201ENST00000393409 CYB5RLQ6IPT4 315 aa15.18■□□□□ 0.02
PLXNA1-201ENST00000393409 KIF6Q6ZMV9 814 aa15.18■□□□□ 0.02
PLXNA1-201ENST00000393409 VPS36Q86VN1 386 aa15.18■□□□□ 0.02
PLXNA1-201ENST00000393409 NAA15Q9BXJ9 866 aaKnown RBP15.18■□□□□ 0.02
PLXNA1-201ENST00000393409 GIGYF2Q6Y7W6 1299 aaKnown RBP15.18■□□□□ 0.02
PLXNA1-201ENST00000393409 URI1O94763 535 aaPredicted RBP15.18■□□□□ 0.02
PLXNA1-201ENST00000393409 STK11IPQ8N1F8 1099 aa15.18■□□□□ 0.02
PLXNA1-201ENST00000393409 SMARCC1Q92922 1105 aaPredicted RBP15.18■□□□□ 0.02
PLXNA1-201ENST00000393409 ANKRD62A6NC57 917 aa15.18■□□□□ 0.02
PLXNA1-201ENST00000393409 MX1P20591 662 aa15.18■□□□□ 0.02
PLXNA1-201ENST00000393409 AACSQ86V21 672 aa15.18■□□□□ 0.02
PLXNA1-201ENST00000393409 LRSAM1Q6UWE0 723 aa15.17■□□□□ 0.02
PLXNA1-201ENST00000393409 NCAPD3P42695 1498 aa15.17■□□□□ 0.02
PLXNA1-201ENST00000393409 SMC1AQ14683 1233 aaKnown RBP15.17■□□□□ 0.02
PLXNA1-201ENST00000393409 BMP2KLQ5H9B9 411 aa15.17■□□□□ 0.02
PLXNA1-201ENST00000393409 FCHSD2O94868 740 aa15.17■□□□□ 0.02
PLXNA1-201ENST00000393409 KIF4BQ2VIQ3 1234 aa15.17■□□□□ 0.02
PLXNA1-201ENST00000393409 ALS2CR12Q96Q35 445 aa15.17■□□□□ 0.02
PLXNA1-201ENST00000393409 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.17■□□□□ 0.022e-6■■■■□ 19.9
PLXNA1-201ENST00000393409 USP25Q9UHP3 1055 aa15.17■□□□□ 0.02
PLXNA1-201ENST00000393409 KIF14Q15058 1648 aa15.17■□□□□ 0.02
PLXNA1-201ENST00000393409 FGFR1OPO95684 399 aaKnown RBP15.17■□□□□ 0.02
PLXNA1-201ENST00000393409 HDGFL1Q5TGJ6 251 aa15.17■□□□□ 0.02
PLXNA1-201ENST00000393409 TMEM57Q8N5G2 664 aa15.17■□□□□ 0.02
PLXNA1-201ENST00000393409 LIMCH1Q9UPQ0 1083 aa15.16■□□□□ 0.02
PLXNA1-201ENST00000393409 PPP1R12BO60237 982 aaPredicted RBP15.16■□□□□ 0.02
PLXNA1-201ENST00000393409 GTF2A1P52655 376 aaPredicted RBP15.16■□□□□ 0.02
PLXNA1-201ENST00000393409 SPECC1LQ69YQ0 1117 aa15.16■□□□□ 0.02
PLXNA1-201ENST00000393409 FKBP15Q5T1M5 1219 aa15.16■□□□□ 0.02
PLXNA1-201ENST00000393409 SRRTQ9BXP5 876 aaKnown RBP15.16■□□□□ 0.02
PLXNA1-201ENST00000393409 FYB1O15117 783 aa15.16■□□□□ 0.02
PLXNA1-201ENST00000393409 USO1O60763 962 aaKnown RBP15.16■□□□□ 0.02
PLXNA1-201ENST00000393409 BAG4O95429 457 aaKnown RBP15.16■□□□□ 0.02
PLXNA1-201ENST00000393409 ZNF644Q9H582 1327 aaPredicted RBP15.15■□□□□ 0.02
PLXNA1-201ENST00000393409 CCDC175P0C221 793 aa15.15■□□□□ 0.02
PLXNA1-201ENST00000393409 DESP17661 470 aa15.15■□□□□ 0.02
PLXNA1-201ENST00000393409 SRGAP3O43295 1099 aa15.15■□□□□ 0.02
PLXNA1-201ENST00000393409 IFFO1Q0D2I5 559 aa15.15■□□□□ 0.02
PLXNA1-201ENST00000393409 PLEKHO1Q53GL0 409 aaPredicted RBP15.15■□□□□ 0.02
PLXNA1-201ENST00000393409 FBXO3Q9UK99 471 aa15.15■□□□□ 0.02
PLXNA1-201ENST00000393409 DNAAF4Q8WXU2 420 aa15.15■□□□□ 0.02
PLXNA1-201ENST00000393409 ATAD2Q6PL18 1390 aa15.15■□□□□ 0.02
PLXNA1-201ENST00000393409 EIF2AK4Q9P2K8 1649 aaKnown RBP15.15■□□□□ 0.02
PLXNA1-201ENST00000393409 GLRX3O76003 335 aaKnown RBP15.15■□□□□ 0.02
PLXNA1-201ENST00000393409 SSFA2P28290 1259 aa15.15■□□□□ 0.02
PLXNA1-201ENST00000393409 LMAN1P49257 510 aa15.15■□□□□ 0.02
PLXNA1-201ENST00000393409 ARFGAP3Q9NP61 516 aa15.15■□□□□ 0.02
PLXNA1-201ENST00000393409 GPATCH11Q8N954 259 aa15.15■□□□□ 0.02
PLXNA1-201ENST00000393409 MNAT1P51948 309 aa15.14■□□□□ 0.01
PLXNA1-201ENST00000393409 WWC2Q6AWC2 1192 aa15.14■□□□□ 0.01
PLXNA1-201ENST00000393409 TAOK3Q9H2K8 898 aa15.14■□□□□ 0.01
PLXNA1-201ENST00000393409 YEATS4O95619 227 aa15.14■□□□□ 0.01
PLXNA1-201ENST00000393409 PAFAH1B1P43034 410 aa15.14■□□□□ 0.01
PLXNA1-201ENST00000393409 KIF1BPQ96EK5 621 aa15.14■□□□□ 0.01
PLXNA1-201ENST00000393409 NF2P35240 595 aa15.13■□□□□ 0.01
PLXNA1-201ENST00000393409 RARSP54136 660 aaKnown RBP15.13■□□□□ 0.01
PLXNA1-201ENST00000393409 NUP88Q99567 741 aaPredicted RBP15.13■□□□□ 0.01
PLXNA1-201ENST00000393409 CETN2P41208 172 aa15.13■□□□□ 0.01
PLXNA1-201ENST00000393409 AQRO60306 1485 aaKnown RBP eCLIP15.13■□□□□ 0.011e-6■■■■■ 35.8
PLXNA1-201ENST00000393409 NSD3Q9BZ95 1437 aa15.13■□□□□ 0.01
PLXNA1-201ENST00000393409 RNF187Q5TA31 235 aaPredicted RBP15.13■□□□□ 0.01
PLXNA1-201ENST00000393409 FAM69CQ0P6D2 419 aa15.13■□□□□ 0.01
PLXNA1-201ENST00000393409 PRXQ9BXM0 1461 aa15.13■□□□□ 0.01
PLXNA1-201ENST00000393409 UBAC1Q9BSL1 405 aa15.12■□□□□ 0.01
PLXNA1-201ENST00000393409 SPATA24Q86W54 205 aa15.12■□□□□ 0.01
PLXNA1-201ENST00000393409 NAIPQ13075 1403 aa15.12■□□□□ 0.01
PLXNA1-201ENST00000393409 CCDC196A0A1B0GTZ2 297 aa15.12■□□□□ 0.01
PLXNA1-201ENST00000393409 SF3B2Q13435 895 aaKnown RBP15.12■□□□□ 0.01
PLXNA1-201ENST00000393409 STX6O43752 255 aa15.12■□□□□ 0.01
PLXNA1-201ENST00000393409 PYM1Q9BRP8 204 aaKnown RBP15.12■□□□□ 0.01
PLXNA1-201ENST00000393409 RAI14Q9P0K7 980 aa15.12■□□□□ 0.01
PLXNA1-201ENST00000393409 RBM25P49756 843 aaKnown RBP15.12■□□□□ 0.01
PLXNA1-201ENST00000393409 SPDYE4A6NLX3 237 aa15.11■□□□□ 0.01
PLXNA1-201ENST00000393409 MAP4K4O95819 1239 aaPredicted RBP15.11■□□□□ 0.01
PLXNA1-201ENST00000393409 FEZ1Q99689 392 aa15.11■□□□□ 0.01
PLXNA1-201ENST00000393409 RALGAPBQ86X10 1494 aa15.11■□□□□ 0.01
PLXNA1-201ENST00000393409 ZKSCAN5Q9Y2L8 839 aa15.11■□□□□ 0.01
PLXNA1-201ENST00000393409 SMAP1Q8IYB5 467 aaPredicted RBP15.11■□□□□ 0.01
PLXNA1-201ENST00000393409 XRCC6P12956 609 aaKnown RBP eCLIP15.11■□□□□ 0.01
PLXNA1-201ENST00000393409 NOLC1Q14978 699 aaKnown RBP eCLIP15.11■□□□□ 0.01
PLXNA1-201ENST00000393409 NBPF8Q3BBV2 869 aa15.11■□□□□ 0.01
PLXNA1-201ENST00000393409 PHF23Q9BUL5 403 aaPredicted RBP15.11■□□□□ 0.01
PLXNA1-201ENST00000393409 POTEJP0CG39 1038 aa15.11■□□□□ 0.01
PLXNA1-201ENST00000393409 IRX3P78415 501 aaPredicted RBP15.11■□□□□ 0.01
PLXNA1-201ENST00000393409 SOGA3Q5TF21 947 aa15.1■□□□□ 0.01
PLXNA1-201ENST00000393409 CC2D2AQ9P2K1 1620 aa15.1■□□□□ 0.01
PLXNA1-201ENST00000393409 CKAP4Q07065 602 aaKnown RBP15.1■□□□□ 0.01
PLXNA1-201ENST00000393409 HSPA4P34932 840 aa15.1■□□□□ 0.01
PLXNA1-201ENST00000393409 BBXQ8WY36 941 aaPredicted RBP15.1■□□□□ 0.01
PLXNA1-201ENST00000393409 RAD54L2Q9Y4B4 1467 aa15.1■□□□□ 0.01
PLXNA1-201ENST00000393409 ZNF165P49910 485 aa15.1■□□□□ 0.01
PLXNA1-201ENST00000393409 IKQ13123 557 aaPredicted RBP15.1■□□□□ 0.01
PLXNA1-201ENST00000393409 ZNF692Q9BU19 519 aaPredicted RBP15.1■□□□□ 0.01
PLXNA1-201ENST00000393409 V9GYY5 206 aaPredicted RBP15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms