RNA–Protein interactions for RNA: ENST00000391310.1

RNU6-1239P-201, Transcript of RNA, U6 small nuclear 1239, pseudogene, humanhuman

BASIC

Gene RNU6-1239P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1239P-201ENST00000391310 ARAFP10398 606 aa3.39□□□□□ -1.87
RNU6-1239P-201ENST00000391310 CLN3Q13286 438 aa3.39□□□□□ -1.87
RNU6-1239P-201ENST00000391310 PPP2R2DQ66LE6 453 aa3.39□□□□□ -1.87
RNU6-1239P-201ENST00000391310 MCTP1Q6DN14 999 aa3.39□□□□□ -1.87
RNU6-1239P-201ENST00000391310 NLRP3Q96P20 1036 aa3.39□□□□□ -1.87
RNU6-1239P-201ENST00000391310 KRTAP4-9Q9BYQ8 210 aa3.39□□□□□ -1.87
RNU6-1239P-201ENST00000391310 CYLDQ9NQC7 956 aa3.39□□□□□ -1.87
RNU6-1239P-201ENST00000391310 LIMD1Q9UGP4 676 aa3.39□□□□□ -1.87
RNU6-1239P-201ENST00000391310 TXKP42681 527 aa3.38□□□□□ -1.87
RNU6-1239P-201ENST00000391310 RTL5Q5HYW3 569 aaPredicted RBP3.38□□□□□ -1.87
RNU6-1239P-201ENST00000391310 CHSY3Q70JA7 882 aa3.38□□□□□ -1.87
RNU6-1239P-201ENST00000391310 TRIM11Q96F44 468 aa3.38□□□□□ -1.87
RNU6-1239P-201ENST00000391310 PLVAPQ9BX97 442 aa3.38□□□□□ -1.87
RNU6-1239P-201ENST00000391310 A0A1B0GTH6 734 aa3.37□□□□□ -1.87
RNU6-1239P-201ENST00000391310 NEURL1BA8MQ27 555 aa3.37□□□□□ -1.87
RNU6-1239P-201ENST00000391310 PAX4O43316 350 aa3.37□□□□□ -1.87
RNU6-1239P-201ENST00000391310 FGFR3P22607 806 aa3.37□□□□□ -1.87
RNU6-1239P-201ENST00000391310 CTBSQ01459 385 aa3.37□□□□□ -1.87
RNU6-1239P-201ENST00000391310 MYSM1Q5VVJ2 828 aa3.37□□□□□ -1.87
RNU6-1239P-201ENST00000391310 ABHD17AQ96GS6 310 aa3.37□□□□□ -1.87
RNU6-1239P-201ENST00000391310 GPAMQ9HCL2 828 aa3.37□□□□□ -1.87
RNU6-1239P-201ENST00000391310 NDFIP2Q9NV92 336 aa3.37□□□□□ -1.87
RNU6-1239P-201ENST00000391310 SPDYE3A6NKU9 549 aa3.36□□□□□ -1.87
RNU6-1239P-201ENST00000391310 H2AFB1P0C5Y9 115 aa3.36□□□□□ -1.87
RNU6-1239P-201ENST00000391310 H2AFB2P0C5Z0 115 aa3.36□□□□□ -1.87
RNU6-1239P-201ENST00000391310 CTDSPL2Q05D32 466 aa3.36□□□□□ -1.87
RNU6-1239P-201ENST00000391310 DZIP3Q86Y13 1208 aaKnown RBP3.36□□□□□ -1.87
RNU6-1239P-201ENST00000391310 FMNL2Q96PY5 1086 aa3.36□□□□□ -1.87
RNU6-1239P-201ENST00000391310 KRTAP4-2Q9BYR5 136 aa3.36□□□□□ -1.87
RNU6-1239P-201ENST00000391310 COL17A1Q9UMD9 1497 aaPredicted RBP3.35□□□□□ -1.87
RNU6-1239P-201ENST00000391310 BNIP3LO60238 219 aa3.35□□□□□ -1.87
RNU6-1239P-201ENST00000391310 APBA3O96018 575 aa3.35□□□□□ -1.87
RNU6-1239P-201ENST00000391310 CSB-PGBD3P0DP91 1061 aa3.35□□□□□ -1.87
RNU6-1239P-201ENST00000391310 ADH6P28332 368 aa3.35□□□□□ -1.87
RNU6-1239P-201ENST00000391310 ERVK-9P63128 1117 aa3.35□□□□□ -1.87
RNU6-1239P-201ENST00000391310 NR6A1Q15406 480 aa3.35□□□□□ -1.87
RNU6-1239P-201ENST00000391310 PRRT3Q5FWE3 981 aa3.35□□□□□ -1.87
RNU6-1239P-201ENST00000391310 EFHC2Q5JST6 749 aa3.35□□□□□ -1.87
RNU6-1239P-201ENST00000391310 AMER1Q5JTC6 1135 aaPredicted RBP3.35□□□□□ -1.87
RNU6-1239P-201ENST00000391310 CCDC125Q86Z20 511 aa3.35□□□□□ -1.87
RNU6-1239P-201ENST00000391310 PARP9Q8IXQ6 854 aa3.35□□□□□ -1.87
RNU6-1239P-201ENST00000391310 PGBD3Q8N328 593 aa3.35□□□□□ -1.87
RNU6-1239P-201ENST00000391310 LRRN4Q8WUT4 740 aa3.35□□□□□ -1.87
RNU6-1239P-201ENST00000391310 AVENQ9NQS1 362 aaPredicted RBP3.35□□□□□ -1.87
RNU6-1239P-201ENST00000391310 CYP2U1Q7Z449 544 aa3.34□□□□□ -1.87
RNU6-1239P-201ENST00000391310 ELNP15502 786 aa3.33□□□□□ -1.88
RNU6-1239P-201ENST00000391310 FZD5Q13467 585 aa3.33□□□□□ -1.88
RNU6-1239P-201ENST00000391310 CC2D2BQ6DHV5 1058 aa3.33□□□□□ -1.88
RNU6-1239P-201ENST00000391310 BARGINQ6ZT62 677 aa3.33□□□□□ -1.88
RNU6-1239P-201ENST00000391310 FCHSD1Q86WN1 690 aa3.33□□□□□ -1.88
RNU6-1239P-201ENST00000391310 NACC1Q96RE7 527 aa3.33□□□□□ -1.88
RNU6-1239P-201ENST00000391310 RUBCNLQ9H714 662 aa3.33□□□□□ -1.88
RNU6-1239P-201ENST00000391310 KLF15Q9UIH9 416 aa3.33□□□□□ -1.88
RNU6-1239P-201ENST00000391310 MSX1P28360 303 aa3.32□□□□□ -1.88
RNU6-1239P-201ENST00000391310 PHKA2P46019 1235 aa3.32□□□□□ -1.88
RNU6-1239P-201ENST00000391310 FAM182BQ5T319 152 aa3.32□□□□□ -1.88
RNU6-1239P-201ENST00000391310 FIGNL1Q6PIW4 674 aa3.32□□□□□ -1.88
RNU6-1239P-201ENST00000391310 PNMA1Q8ND90 353 aa3.32□□□□□ -1.88
RNU6-1239P-201ENST00000391310 CRISPLD1Q9H336 500 aa3.32□□□□□ -1.88
RNU6-1239P-201ENST00000391310 ARHGEF10LQ9HCE6 1279 aa3.32□□□□□ -1.88
RNU6-1239P-201ENST00000391310 TRAK2O60296 914 aa3.31□□□□□ -1.88
RNU6-1239P-201ENST00000391310 GIGYF1O75420 1035 aaPredicted RBP3.31□□□□□ -1.88
RNU6-1239P-201ENST00000391310 CLK2P49760 499 aaKnown RBP3.31□□□□□ -1.88
RNU6-1239P-201ENST00000391310 CENPCQ03188 943 aa3.31□□□□□ -1.88
RNU6-1239P-201ENST00000391310 GNASQ5JWF2 1037 aa3.31□□□□□ -1.88
RNU6-1239P-201ENST00000391310 CNKSR1Q969H4 720 aa3.31□□□□□ -1.88
RNU6-1239P-201ENST00000391310 ESYT1Q9BSJ8 1104 aa3.31□□□□□ -1.88
RNU6-1239P-201ENST00000391310 PCDHGC4Q9Y5F7 938 aa3.31□□□□□ -1.88
RNU6-1239P-201ENST00000391310 ZMYND10O75800 440 aa3.3□□□□□ -1.88
RNU6-1239P-201ENST00000391310 GNRH1P01148 92 aa3.3□□□□□ -1.88
RNU6-1239P-201ENST00000391310 ZNF468Q5VIY5 522 aaPredicted RBP3.3□□□□□ -1.88
RNU6-1239P-201ENST00000391310 ZSCAN10Q96SZ4 725 aaPredicted RBP3.3□□□□□ -1.88
RNU6-1239P-201ENST00000391310 PRDM6Q9NQX0 595 aa3.3□□□□□ -1.88
RNU6-1239P-201ENST00000391310 DNAAF2Q9NVR5 837 aaKnown RBP3.3□□□□□ -1.88
RNU6-1239P-201ENST00000391310 RNF112Q9ULX5 631 aa3.3□□□□□ -1.88
RNU6-1239P-201ENST00000391310 HRH3Q9Y5N1 445 aa3.3□□□□□ -1.88
RNU6-1239P-201ENST00000391310 ELOA3CA0A087WX78 387 aaPredicted RBP3.29□□□□□ -1.88
RNU6-1239P-201ENST00000391310 ELOA3DA6NLF2 546 aaPredicted RBP3.29□□□□□ -1.88
RNU6-1239P-201ENST00000391310 IL2RAP01589 272 aa3.29□□□□□ -1.88
RNU6-1239P-201ENST00000391310 GTF2E1P29083 439 aaPredicted RBP3.29□□□□□ -1.88
RNU6-1239P-201ENST00000391310 SCTRP47872 440 aa3.29□□□□□ -1.88
RNU6-1239P-201ENST00000391310 TRIM28Q13263 835 aaKnown RBP3.29□□□□□ -1.88
RNU6-1239P-201ENST00000391310 COL9A3Q14050 684 aaPredicted RBP3.29□□□□□ -1.88
RNU6-1239P-201ENST00000391310 ELOA3BQ3SY89 546 aa3.29□□□□□ -1.88
RNU6-1239P-201ENST00000391310 C4orf17Q53FE4 359 aa3.29□□□□□ -1.88
RNU6-1239P-201ENST00000391310 RNF20Q5VTR2 975 aa3.29□□□□□ -1.88
RNU6-1239P-201ENST00000391310 NLRP8Q86W28 1048 aa3.29□□□□□ -1.88
RNU6-1239P-201ENST00000391310 ELOA3Q8NG57 546 aa3.29□□□□□ -1.88
RNU6-1239P-201ENST00000391310 ZCCHC2Q9C0B9 1178 aaKnown RBP3.29□□□□□ -1.88
RNU6-1239P-201ENST00000391310 OSBPL3Q9H4L5 887 aa3.29□□□□□ -1.88
RNU6-1239P-201ENST00000391310 RTN4Q9NQC3 1192 aaKnown RBP3.29□□□□□ -1.88
RNU6-1239P-201ENST00000391310 HCN2Q9UL51 889 aa3.29□□□□□ -1.88
RNU6-1239P-201ENST00000391310 C9orf172C9J069 976 aa3.28□□□□□ -1.88
RNU6-1239P-201ENST00000391310 FAM229AH3BQW9 127 aa3.28□□□□□ -1.88
RNU6-1239P-201ENST00000391310 TRIM66O15016 1216 aa3.28□□□□□ -1.88
RNU6-1239P-201ENST00000391310 MAPTP10636 758 aaKnown RBP3.28□□□□□ -1.88
RNU6-1239P-201ENST00000391310 CD33P20138 364 aa3.28□□□□□ -1.88
RNU6-1239P-201ENST00000391310 PCBP4P57723 403 aaKnown RBP3.28□□□□□ -1.88
RNU6-1239P-201ENST00000391310 TNP2Q05952 138 aa3.28□□□□□ -1.88
RNU6-1239P-201ENST00000391310 ADGRE1Q14246 886 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms