RNA–Protein interactions for RNA: ENST00000389416.8

PTPRN2-202, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRN2, Length 4,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-202ENST00000389416 RRP12Q5JTH9 1297 aaKnown RBP15.8■□□□□ 0.12
PTPRN2-202ENST00000389416 PIK3C2GO75747 1445 aa15.79■□□□□ 0.12
PTPRN2-202ENST00000389416 STK11IPQ8N1F8 1099 aa15.79■□□□□ 0.12
PTPRN2-202ENST00000389416 PTPRTO14522 1441 aa15.79■□□□□ 0.12
PTPRN2-202ENST00000389416 PLEKHG3A1L390 1219 aa15.79■□□□□ 0.12
PTPRN2-202ENST00000389416 RSPH6AQ9H0K4 717 aa15.79■□□□□ 0.12
PTPRN2-202ENST00000389416 EDC4Q6P2E9 1401 aaKnown RBP15.79■□□□□ 0.12
PTPRN2-202ENST00000389416 DDX11L8A8MPP1 907 aa15.79■□□□□ 0.12
PTPRN2-202ENST00000389416 CWC27Q6UX04 472 aaKnown RBP15.79■□□□□ 0.12
PTPRN2-202ENST00000389416 PSMA5P28066 241 aa15.78■□□□□ 0.12
PTPRN2-202ENST00000389416 KDM4AO75164 1064 aa15.78■□□□□ 0.12
PTPRN2-202ENST00000389416 ANKRD13DQ6ZTN6 518 aa15.78■□□□□ 0.12
PTPRN2-202ENST00000389416 TEX13AQ9BXU3 409 aaPredicted RBP15.78■□□□□ 0.12
PTPRN2-202ENST00000389416 COPS6Q7L5N1 327 aa15.78■□□□□ 0.12
PTPRN2-202ENST00000389416 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.78■□□□□ 0.12
PTPRN2-202ENST00000389416 IFIT5Q13325 482 aaKnown RBP15.77■□□□□ 0.12
PTPRN2-202ENST00000389416 XAGE3Q8WTP9 111 aa15.77■□□□□ 0.12
PTPRN2-202ENST00000389416 CCDC8Q9H0W5 538 aaPredicted RBP15.77■□□□□ 0.12
PTPRN2-202ENST00000389416 GOLGA6L3A6NEY3 463 aa15.77■□□□□ 0.11
PTPRN2-202ENST00000389416 CREBRFQ8IUR6 639 aa15.77■□□□□ 0.11
PTPRN2-202ENST00000389416 SPATA31E1Q6ZUB1 1445 aa15.77■□□□□ 0.11
PTPRN2-202ENST00000389416 IDH1O75874 414 aaKnown RBP15.76■□□□□ 0.11
PTPRN2-202ENST00000389416 IL13P35225 146 aa15.76■□□□□ 0.11
PTPRN2-202ENST00000389416 BOLA2Q9H3K6 86 aa15.76■□□□□ 0.11
PTPRN2-202ENST00000389416 ABCF2Q9UG63 623 aa15.76■□□□□ 0.11
PTPRN2-202ENST00000389416 ZFYVE9O95405 1425 aa15.76■□□□□ 0.11
PTPRN2-202ENST00000389416 MX1P20591 662 aa15.76■□□□□ 0.11
PTPRN2-202ENST00000389416 HSP90AB3PQ58FF7 597 aa15.76■□□□□ 0.11
PTPRN2-202ENST00000389416 PIK3R4Q99570 1358 aa15.76■□□□□ 0.11
PTPRN2-202ENST00000389416 MEIS3Q99687 375 aa15.76■□□□□ 0.11
PTPRN2-202ENST00000389416 TNNQ9UQP3 1299 aa15.76■□□□□ 0.11
PTPRN2-202ENST00000389416 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.75■□□□□ 0.11
PTPRN2-202ENST00000389416 PHF14O94880 888 aa15.75■□□□□ 0.11
PTPRN2-202ENST00000389416 HECW2Q9P2P5 1572 aa15.75■□□□□ 0.11
PTPRN2-202ENST00000389416 SIRT1Q96EB6 747 aa15.74■□□□□ 0.11
PTPRN2-202ENST00000389416 LRP2BPQ9P2M1 347 aa15.74■□□□□ 0.11
PTPRN2-202ENST00000389416 EFCAB6Q5THR3 1501 aa15.74■□□□□ 0.11
PTPRN2-202ENST00000389416 VAMP4O75379 141 aa15.74■□□□□ 0.11
PTPRN2-202ENST00000389416 PPP1R42Q7Z4L9 355 aa15.74■□□□□ 0.11
PTPRN2-202ENST00000389416 CTDP1Q9Y5B0 961 aaPredicted RBP15.74■□□□□ 0.11
PTPRN2-202ENST00000389416 NPC1L1Q9UHC9 1359 aa15.74■□□□□ 0.11
PTPRN2-202ENST00000389416 CHAF1AQ13111 956 aaPredicted RBP15.74■□□□□ 0.11
PTPRN2-202ENST00000389416 RAI14Q9P0K7 980 aa15.74■□□□□ 0.11
PTPRN2-202ENST00000389416 MSNP26038 577 aaKnown RBP15.73■□□□□ 0.11
PTPRN2-202ENST00000389416 RABEP1Q15276 862 aa15.73■□□□□ 0.11
PTPRN2-202ENST00000389416 KDM5DQ9BY66 1539 aa15.73■□□□□ 0.11
PTPRN2-202ENST00000389416 RAB11FIP3O75154 756 aa15.73■□□□□ 0.11
PTPRN2-202ENST00000389416 GLRX3O76003 335 aaKnown RBP15.73■□□□□ 0.11
PTPRN2-202ENST00000389416 NUCB2P80303 420 aa15.73■□□□□ 0.11
PTPRN2-202ENST00000389416 CWC25Q9NXE8 425 aaPredicted RBP15.73■□□□□ 0.11
PTPRN2-202ENST00000389416 PLA2R1Q13018 1463 aa15.73■□□□□ 0.11
PTPRN2-202ENST00000389416 PRDM15P57071 1507 aaPredicted RBP15.73■□□□□ 0.11
PTPRN2-202ENST00000389416 ATP6V1AP38606 617 aa15.73■□□□□ 0.11
PTPRN2-202ENST00000389416 SART3Q15020 963 aaKnown RBP15.73■□□□□ 0.11
PTPRN2-202ENST00000389416 AK7Q96M32 723 aa15.73■□□□□ 0.11
PTPRN2-202ENST00000389416 DNAJC5Q9H3Z4 198 aa15.73■□□□□ 0.11
PTPRN2-202ENST00000389416 SBNO1A3KN83 1393 aa15.72■□□□□ 0.11
PTPRN2-202ENST00000389416 IGHDP01880 384 aa15.72■□□□□ 0.11
PTPRN2-202ENST00000389416 DCAF5Q96JK2 942 aa15.72■□□□□ 0.11
PTPRN2-202ENST00000389416 NBPF6Q5VWK0 638 aa15.72■□□□□ 0.11
PTPRN2-202ENST00000389416 NBPF4Q96M43 638 aa15.72■□□□□ 0.11
PTPRN2-202ENST00000389416 MAP3K5Q99683 1374 aa15.72■□□□□ 0.11
PTPRN2-202ENST00000389416 BICD2Q8TD16 824 aa15.72■□□□□ 0.11
PTPRN2-202ENST00000389416 TMEM94Q12767 1356 aa15.71■□□□□ 0.11
PTPRN2-202ENST00000389416 MRPL50Q8N5N7 158 aaKnown RBP15.71■□□□□ 0.11
PTPRN2-202ENST00000389416 ARHGAP45Q92619 1136 aa15.71■□□□□ 0.11
PTPRN2-202ENST00000389416 CDC42BPAQ5VT25 1732 aa15.71■□□□□ 0.11
PTPRN2-202ENST00000389416 LDHAL6AQ6ZMR3 332 aa15.71■□□□□ 0.11
PTPRN2-202ENST00000389416 NACAP1Q9BZK3 213 aa15.71■□□□□ 0.11
PTPRN2-202ENST00000389416 PCDHB15Q9Y5E8 787 aa15.71■□□□□ 0.11
PTPRN2-202ENST00000389416 ERVK-7P63135 1459 aa15.71■□□□□ 0.11
PTPRN2-202ENST00000389416 RNMTO43148 476 aaKnown RBP15.71■□□□□ 0.1
PTPRN2-202ENST00000389416 IFIT1P09914 478 aaKnown RBP15.71■□□□□ 0.1
PTPRN2-202ENST00000389416 BCL11BQ9C0K0 894 aaPredicted RBP15.71■□□□□ 0.1
PTPRN2-202ENST00000389416 AKAP2Q9Y2D5 859 aa15.71■□□□□ 0.1
PTPRN2-202ENST00000389416 SAFBQ15424 915 aaKnown RBP eCLIP15.7■□□□□ 0.12e-6■■■□□ 15.9
PTPRN2-202ENST00000389416 CYP46A1Q9Y6A2 500 aa15.7■□□□□ 0.1
PTPRN2-202ENST00000389416 PLEKHG1Q9ULL1 1385 aa15.7■□□□□ 0.1
PTPRN2-202ENST00000389416 ANKRD18BA2A2Z9 1011 aa15.7■□□□□ 0.1
PTPRN2-202ENST00000389416 TPM4P67936 248 aa15.7■□□□□ 0.1
PTPRN2-202ENST00000389416 RBM5P52756 815 aaKnown RBP eCLIP15.7■□□□□ 0.12e-6■■■□□ 15.2
PTPRN2-202ENST00000389416 STK3Q13188 491 aa15.7■□□□□ 0.1
PTPRN2-202ENST00000389416 ZSCAN25Q6NSZ9 544 aa15.7■□□□□ 0.1
PTPRN2-202ENST00000389416 LGR6Q9HBX8 967 aa15.7■□□□□ 0.1
PTPRN2-202ENST00000389416 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.7■□□□□ 0.1
PTPRN2-202ENST00000389416 NCBP3Q53F19 620 aaKnown RBP15.69■□□□□ 0.1
PTPRN2-202ENST00000389416 TSHZ3Q63HK5 1081 aa15.69■□□□□ 0.1
PTPRN2-202ENST00000389416 RLBP1P12271 317 aa15.69■□□□□ 0.1
PTPRN2-202ENST00000389416 ROBO2Q9HCK4 1378 aa15.69■□□□□ 0.1
PTPRN2-202ENST00000389416 RFC4P35249 363 aa15.69■□□□□ 0.1
PTPRN2-202ENST00000389416 IKQ13123 557 aaPredicted RBP15.69■□□□□ 0.1
PTPRN2-202ENST00000389416 ANKIB1Q9P2G1 1089 aa15.69■□□□□ 0.1
PTPRN2-202ENST00000389416 ATP2B1P20020 1258 aa15.68■□□□□ 0.1
PTPRN2-202ENST00000389416 KSR2Q6VAB6 950 aa15.68■□□□□ 0.1
PTPRN2-202ENST00000389416 SBNO2Q9Y2G9 1366 aa15.68■□□□□ 0.1
PTPRN2-202ENST00000389416 HMGB2P26583 209 aaKnown RBP15.68■□□□□ 0.1
PTPRN2-202ENST00000389416 NAP1L5Q96NT1 182 aaPredicted RBP15.68■□□□□ 0.1
PTPRN2-202ENST00000389416 ZNF219Q9P2Y4 722 aaPredicted RBP15.68■□□□□ 0.1
PTPRN2-202ENST00000389416 SLC3A2P08195 630 aaKnown RBP15.68■□□□□ 0.1
PTPRN2-202ENST00000389416 ATP2B2Q01814 1243 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms