RNA–Protein interactions for RNA: ENST00000388090.1

SNORA40-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 126 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40-201ENST00000388090 PRSS36Q5K4E3 855 aa4.74□□□□□ -1.65
SNORA40-201ENST00000388090 TAS1R3Q7RTX0 852 aa4.74□□□□□ -1.65
SNORA40-201ENST00000388090 RNF135Q8IUD6 432 aa4.74□□□□□ -1.65
SNORA40-201ENST00000388090 SEPT12Q8IYM1 358 aa4.74□□□□□ -1.65
SNORA40-201ENST00000388090 TRIM11Q96F44 468 aa4.74□□□□□ -1.65
SNORA40-201ENST00000388090 ATXN7L1Q9ULK2 861 aaPredicted RBP4.74□□□□□ -1.65
SNORA40-201ENST00000388090 CLN3Q13286 438 aa4.73□□□□□ -1.65
SNORA40-201ENST00000388090 LRP8Q14114 963 aa4.73□□□□□ -1.65
SNORA40-201ENST00000388090 NLRP3Q96P20 1036 aa4.73□□□□□ -1.65
SNORA40-201ENST00000388090 GPAMQ9HCL2 828 aa4.73□□□□□ -1.65
SNORA40-201ENST00000388090 NDFIP2Q9NV92 336 aa4.73□□□□□ -1.65
SNORA40-201ENST00000388090 NEURL1BA8MQ27 555 aa4.72□□□□□ -1.65
SNORA40-201ENST00000388090 SPATA31C1P0DKV0 1188 aa4.72□□□□□ -1.65
SNORA40-201ENST00000388090 ARAFP10398 606 aa4.72□□□□□ -1.65
SNORA40-201ENST00000388090 LBRQ14739 615 aaKnown RBP4.72□□□□□ -1.65
SNORA40-201ENST00000388090 CHSY3Q70JA7 882 aa4.72□□□□□ -1.65
SNORA40-201ENST00000388090 DZIP3Q86Y13 1208 aaKnown RBP4.72□□□□□ -1.65
SNORA40-201ENST00000388090 ABHD17AQ96GS6 310 aa4.72□□□□□ -1.65
SNORA40-201ENST00000388090 HYAL3O43820 417 aaPredicted RBP4.71□□□□□ -1.66
SNORA40-201ENST00000388090 BNIP3LO60238 219 aa4.71□□□□□ -1.66
SNORA40-201ENST00000388090 ZMYND10O75800 440 aa4.71□□□□□ -1.66
SNORA40-201ENST00000388090 FGFR3P22607 806 aa4.71□□□□□ -1.66
SNORA40-201ENST00000388090 ERVK-9P63128 1117 aa4.71□□□□□ -1.66
SNORA40-201ENST00000388090 PLVAPQ9BX97 442 aa4.71□□□□□ -1.66
SNORA40-201ENST00000388090 A0A1B0GTH6 734 aa4.7□□□□□ -1.66
SNORA40-201ENST00000388090 CLK2P49760 499 aaKnown RBP4.7□□□□□ -1.66
SNORA40-201ENST00000388090 DHX30Q7L2E3 1194 aaKnown RBP eCLIP4.7□□□□□ -1.66
SNORA40-201ENST00000388090 KLF15Q9UIH9 416 aa4.7□□□□□ -1.66
SNORA40-201ENST00000388090 CC2D2BQ6DHV5 1058 aa4.69□□□□□ -1.66
SNORA40-201ENST00000388090 EPS8L1Q8TE68 723 aa4.69□□□□□ -1.66
SNORA40-201ENST00000388090 TRIM52Q96A61 297 aa4.69□□□□□ -1.66
SNORA40-201ENST00000388090 RUBCNLQ9H714 662 aa4.69□□□□□ -1.66
SNORA40-201ENST00000388090 ARID1BQ8NFD5 2236 aaPredicted RBP4.68□□□□□ -1.66
SNORA40-201ENST00000388090 TRIM66O15016 1216 aa4.68□□□□□ -1.66
SNORA40-201ENST00000388090 GIGYF1O75420 1035 aaPredicted RBP4.68□□□□□ -1.66
SNORA40-201ENST00000388090 PHKA2P46019 1235 aa4.68□□□□□ -1.66
SNORA40-201ENST00000388090 MCTP1Q6DN14 999 aa4.68□□□□□ -1.66
SNORA40-201ENST00000388090 FCHSD1Q86WN1 690 aa4.68□□□□□ -1.66
SNORA40-201ENST00000388090 KRTAP4-9Q9BYQ8 210 aa4.68□□□□□ -1.66
SNORA40-201ENST00000388090 ARHGEF10LQ9HCE6 1279 aa4.68□□□□□ -1.66
SNORA40-201ENST00000388090 HCN2Q9UL51 889 aa4.68□□□□□ -1.66
SNORA40-201ENST00000388090 TRAK2O60296 914 aa4.67□□□□□ -1.66
SNORA40-201ENST00000388090 COBLO75128 1261 aa4.67□□□□□ -1.66
SNORA40-201ENST00000388090 MSX1P28360 303 aa4.67□□□□□ -1.66
SNORA40-201ENST00000388090 SCTRP47872 440 aa4.67□□□□□ -1.66
SNORA40-201ENST00000388090 FBXO31Q5XUX0 539 aaPredicted RBP4.67□□□□□ -1.66
SNORA40-201ENST00000388090 CYP2U1Q7Z449 544 aa4.67□□□□□ -1.66
SNORA40-201ENST00000388090 H2AFB1P0C5Y9 115 aa4.66□□□□□ -1.66
SNORA40-201ENST00000388090 H2AFB2P0C5Z0 115 aa4.66□□□□□ -1.66
SNORA40-201ENST00000388090 CSB-PGBD3P0DP91 1061 aa4.66□□□□□ -1.66
SNORA40-201ENST00000388090 ADH6P28332 368 aa4.66□□□□□ -1.66
SNORA40-201ENST00000388090 CENPCQ03188 943 aa4.66□□□□□ -1.66
SNORA40-201ENST00000388090 EFHC2Q5JST6 749 aa4.66□□□□□ -1.66
SNORA40-201ENST00000388090 PGBD3Q8N328 593 aa4.66□□□□□ -1.66
SNORA40-201ENST00000388090 OSBPL3Q9H4L5 887 aa4.66□□□□□ -1.66
SNORA40-201ENST00000388090 DNAAF2Q9NVR5 837 aaKnown RBP4.66□□□□□ -1.66
SNORA40-201ENST00000388090 HRH3Q9Y5N1 445 aa4.66□□□□□ -1.66
SNORA40-201ENST00000388090 IL2RAP01589 272 aa4.65□□□□□ -1.67
SNORA40-201ENST00000388090 ESYT1Q9BSJ8 1104 aa4.65□□□□□ -1.67
SNORA40-201ENST00000388090 KRTAP4-2Q9BYR5 136 aa4.65□□□□□ -1.67
SNORA40-201ENST00000388090 CRISPLD1Q9H336 500 aa4.65□□□□□ -1.67
SNORA40-201ENST00000388090 POLR3EQ9NVU0 708 aa4.65□□□□□ -1.67
SNORA40-201ENST00000388090 APBA3O96018 575 aa4.64□□□□□ -1.67
SNORA40-201ENST00000388090 C4orf17Q53FE4 359 aa4.64□□□□□ -1.67
SNORA40-201ENST00000388090 CCDC125Q86Z20 511 aa4.64□□□□□ -1.67
SNORA40-201ENST00000388090 CNKSR1Q969H4 720 aa4.64□□□□□ -1.67
SNORA40-201ENST00000388090 FMNL2Q96PY5 1086 aa4.64□□□□□ -1.67
SNORA40-201ENST00000388090 FHDC1Q9C0D6 1143 aaPredicted RBP4.64□□□□□ -1.67
SNORA40-201ENST00000388090 HMX1Q9NP08 348 aaPredicted RBP4.64□□□□□ -1.67
SNORA40-201ENST00000388090 AVENQ9NQS1 362 aaPredicted RBP4.64□□□□□ -1.67
SNORA40-201ENST00000388090 RAB6BQ9NRW1 208 aa4.64□□□□□ -1.67
SNORA40-201ENST00000388090 COL17A1Q9UMD9 1497 aaPredicted RBP4.63□□□□□ -1.67
SNORA40-201ENST00000388090 YBX3P16989 372 aaKnown RBP eCLIP4.63□□□□□ -1.67
SNORA40-201ENST00000388090 COL9A3Q14050 684 aaPredicted RBP4.63□□□□□ -1.67
SNORA40-201ENST00000388090 PRRT3Q5FWE3 981 aa4.63□□□□□ -1.67
SNORA40-201ENST00000388090 ZSCAN10Q96SZ4 725 aaPredicted RBP4.63□□□□□ -1.67
SNORA40-201ENST00000388090 PCDHGC4Q9Y5F7 938 aa4.63□□□□□ -1.67
SNORA40-201ENST00000388090 SPDYE3A6NKU9 549 aa4.62□□□□□ -1.67
SNORA40-201ENST00000388090 FAM229AH3BQW9 127 aa4.62□□□□□ -1.67
SNORA40-201ENST00000388090 TXKP42681 527 aa4.62□□□□□ -1.67
SNORA40-201ENST00000388090 FAM182BQ5T319 152 aa4.62□□□□□ -1.67
SNORA40-201ENST00000388090 ZC3H15Q8WU90 426 aaKnown RBP4.62□□□□□ -1.67
SNORA40-201ENST00000388090 MDFIQ99750 246 aa4.62□□□□□ -1.67
SNORA40-201ENST00000388090 ZCCHC2Q9C0B9 1178 aaKnown RBP4.62□□□□□ -1.67
SNORA40-201ENST00000388090 PAX4O43316 350 aa4.61□□□□□ -1.67
SNORA40-201ENST00000388090 GNRH1P01148 92 aa4.61□□□□□ -1.67
SNORA40-201ENST00000388090 PLCB2Q00722 1185 aa4.61□□□□□ -1.67
SNORA40-201ENST00000388090 GNASQ5JWF2 1037 aa4.61□□□□□ -1.67
SNORA40-201ENST00000388090 FIGNL1Q6PIW4 674 aa4.61□□□□□ -1.67
SNORA40-201ENST00000388090 PNMA1Q8ND90 353 aa4.61□□□□□ -1.67
SNORA40-201ENST00000388090 MAPTP10636 758 aaKnown RBP4.6□□□□□ -1.67
SNORA40-201ENST00000388090 CD33P20138 364 aa4.6□□□□□ -1.67
SNORA40-201ENST00000388090 PCBP4P57723 403 aaKnown RBP4.6□□□□□ -1.67
SNORA40-201ENST00000388090 TNP2Q05952 138 aa4.6□□□□□ -1.67
SNORA40-201ENST00000388090 XAGE2Q96GT9 111 aa4.6□□□□□ -1.67
SNORA40-201ENST00000388090 NACC1Q96RE7 527 aa4.6□□□□□ -1.67
SNORA40-201ENST00000388090 RSPH6AQ9H0K4 717 aa4.6□□□□□ -1.67
SNORA40-201ENST00000388090 PCDHB9Q9Y5E1 797 aa4.6□□□□□ -1.67
SNORA40-201ENST00000388090 ATXN7O15265 892 aaPredicted RBP4.59□□□□□ -1.67
SNORA40-201ENST00000388090 ELNP15502 786 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms