RNA–Protein interactions for RNA: ENST00000384161.1

RNU6-48P-201, Transcript of RNA, U6 small nuclear 48, pseudogene, humanhuman

BASIC

Gene RNU6-48P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-48P-201ENST00000384161 TRERF1Q96PN7 1200 aa5.66□□□□□ -1.5
RNU6-48P-201ENST00000384161 CFHR5Q9BXR6 569 aa5.66□□□□□ -1.5
RNU6-48P-201ENST00000384161 ZMYND15Q9H091 742 aa5.66□□□□□ -1.5
RNU6-48P-201ENST00000384161 CHRNA4P43681 627 aa5.65□□□□□ -1.5
RNU6-48P-201ENST00000384161 POU4F2Q12837 409 aa5.65□□□□□ -1.5
RNU6-48P-201ENST00000384161 WASHC4Q2M389 1173 aa5.65□□□□□ -1.5
RNU6-48P-201ENST00000384161 NBPF20Q3BBV1 942 aa5.65□□□□□ -1.5
RNU6-48P-201ENST00000384161 ZNF592Q92610 1267 aa5.65□□□□□ -1.5
RNU6-48P-201ENST00000384161 GRIP2Q9C0E4 1043 aa5.65□□□□□ -1.5
RNU6-48P-201ENST00000384161 NSFL1CQ9UNZ2 370 aaKnown RBP5.65□□□□□ -1.5
RNU6-48P-201ENST00000384161 COG6Q9Y2V7 657 aa5.65□□□□□ -1.5
RNU6-48P-201ENST00000384161 SPATA31C2B4DYI2 1134 aa5.64□□□□□ -1.51
RNU6-48P-201ENST00000384161 PTK2Q05397 1052 aa5.64□□□□□ -1.51
RNU6-48P-201ENST00000384161 WDR44Q5JSH3 913 aa5.64□□□□□ -1.51
RNU6-48P-201ENST00000384161 EPS8L1Q8TE68 723 aa5.64□□□□□ -1.51
RNU6-48P-201ENST00000384161 EDARADDQ8WWZ3 215 aa5.64□□□□□ -1.51
RNU6-48P-201ENST00000384161 GDPD2Q9HCC8 539 aa5.64□□□□□ -1.51
RNU6-48P-201ENST00000384161 ZNF330Q9Y3S2 320 aaPredicted RBP5.64□□□□□ -1.51
RNU6-48P-201ENST00000384161 MCCD1P59942 119 aaPredicted RBP5.63□□□□□ -1.51
RNU6-48P-201ENST00000384161 GRIN2CQ14957 1233 aa5.63□□□□□ -1.51
RNU6-48P-201ENST00000384161 ZMYM1Q5SVZ6 1142 aa5.63□□□□□ -1.51
RNU6-48P-201ENST00000384161 NBPF10Q6P3W6 841 aaKnown RBP5.63□□□□□ -1.51
RNU6-48P-201ENST00000384161 NBPF15Q8N660 670 aa5.63□□□□□ -1.51
RNU6-48P-201ENST00000384161 GAS2L1Q99501 681 aaPredicted RBP5.63□□□□□ -1.51
RNU6-48P-201ENST00000384161 SEMA6BQ9H3T3 888 aa5.63□□□□□ -1.51
RNU6-48P-201ENST00000384161 TBC1D2BQ9UPU7 963 aa5.63□□□□□ -1.51
RNU6-48P-201ENST00000384161 A0A1W2PRU2 124 aa5.62□□□□□ -1.51
RNU6-48P-201ENST00000384161 ABL2P42684 1182 aa5.62□□□□□ -1.51
RNU6-48P-201ENST00000384161 PROSER2Q86WR7 435 aaPredicted RBP5.62□□□□□ -1.51
RNU6-48P-201ENST00000384161 NUCKS1Q9H1E3 243 aaKnown RBP5.62□□□□□ -1.51
RNU6-48P-201ENST00000384161 GDF2Q9UK05 429 aaPredicted RBP5.62□□□□□ -1.51
RNU6-48P-201ENST00000384161 ZBBXA8MT70 800 aa5.61□□□□□ -1.51
RNU6-48P-201ENST00000384161 ATP5J2-PTCD1G3V325 749 aa5.61□□□□□ -1.51
RNU6-48P-201ENST00000384161 C2CD2LO14523 706 aa5.61□□□□□ -1.51
RNU6-48P-201ENST00000384161 F11P03951 625 aa5.61□□□□□ -1.51
RNU6-48P-201ENST00000384161 SOX11P35716 441 aa5.61□□□□□ -1.51
RNU6-48P-201ENST00000384161 RAB15P59190 212 aa5.61□□□□□ -1.51
RNU6-48P-201ENST00000384161 NR1H3Q13133 447 aa5.61□□□□□ -1.51
RNU6-48P-201ENST00000384161 SEPT12Q8IYM1 358 aa5.61□□□□□ -1.51
RNU6-48P-201ENST00000384161 CLUAP1Q96AJ1 413 aa5.61□□□□□ -1.51
RNU6-48P-201ENST00000384161 CYLDQ9NQC7 956 aa5.61□□□□□ -1.51
RNU6-48P-201ENST00000384161 EIF4G2P78344 907 aaKnown RBP eCLIP5.6□□□□□ -1.51
RNU6-48P-201ENST00000384161 DOC2BQ14184 412 aa5.6□□□□□ -1.51
RNU6-48P-201ENST00000384161 FNBP4Q8N3X1 1017 aaPredicted RBP5.6□□□□□ -1.51
RNU6-48P-201ENST00000384161 POM121Q96HA1 1249 aa5.6□□□□□ -1.51
RNU6-48P-201ENST00000384161 TIMELESSQ9UNS1 1208 aa5.6□□□□□ -1.51
RNU6-48P-201ENST00000384161 MEN1O00255 615 aa5.59□□□□□ -1.51
RNU6-48P-201ENST00000384161 GNB5O14775 395 aa5.59□□□□□ -1.51
RNU6-48P-201ENST00000384161 TRAK2O60296 914 aa5.59□□□□□ -1.51
RNU6-48P-201ENST00000384161 DGKGP49619 791 aa5.59□□□□□ -1.51
RNU6-48P-201ENST00000384161 IRF5Q13568 498 aa5.59□□□□□ -1.51
RNU6-48P-201ENST00000384161 RSPO4Q2I0M5 234 aaPredicted RBP5.59□□□□□ -1.51
RNU6-48P-201ENST00000384161 GOLGA6L1Q8N7Z2 621 aa5.59□□□□□ -1.51
RNU6-48P-201ENST00000384161 BTBD6Q96KE9 485 aa5.59□□□□□ -1.51
RNU6-48P-201ENST00000384161 RRAGCQ9HB90 399 aa5.59□□□□□ -1.51
RNU6-48P-201ENST00000384161 GPR37L1O60883 481 aa5.58□□□□□ -1.52
RNU6-48P-201ENST00000384161 NKAPLQ5M9Q1 402 aa5.58□□□□□ -1.52
RNU6-48P-201ENST00000384161 SLCO4C1Q6ZQN7 724 aa5.58□□□□□ -1.52
RNU6-48P-201ENST00000384161 DZIP3Q86Y13 1208 aaKnown RBP5.58□□□□□ -1.52
RNU6-48P-201ENST00000384161 TIMMDC1Q9NPL8 285 aa5.58□□□□□ -1.52
RNU6-48P-201ENST00000384161 NDFIP2Q9NV92 336 aa5.58□□□□□ -1.52
RNU6-48P-201ENST00000384161 FBXO45P0C2W1 286 aa5.57□□□□□ -1.52
RNU6-48P-201ENST00000384161 ERVK-9P63128 1117 aa5.57□□□□□ -1.52
RNU6-48P-201ENST00000384161 CLN3Q13286 438 aa5.57□□□□□ -1.52
RNU6-48P-201ENST00000384161 CCDC125Q86Z20 511 aa5.57□□□□□ -1.52
RNU6-48P-201ENST00000384161 BTBD11A6QL63 1104 aa5.56□□□□□ -1.52
RNU6-48P-201ENST00000384161 WASLO00401 505 aaPredicted RBP5.56□□□□□ -1.52
RNU6-48P-201ENST00000384161 EPXP11678 715 aa5.56□□□□□ -1.52
RNU6-48P-201ENST00000384161 SEMA3FQ13275 785 aa5.56□□□□□ -1.52
RNU6-48P-201ENST00000384161 SLC27A3Q5K4L6 730 aa5.56□□□□□ -1.52
RNU6-48P-201ENST00000384161 ARTNQ5T4W7 220 aa5.56□□□□□ -1.52
RNU6-48P-201ENST00000384161 TRIM52Q96A61 297 aa5.56□□□□□ -1.52
RNU6-48P-201ENST00000384161 GGA1Q9UJY5 639 aa5.56□□□□□ -1.52
RNU6-48P-201ENST00000384161 GIGYF1O75420 1035 aaPredicted RBP5.55□□□□□ -1.52
RNU6-48P-201ENST00000384161 VAC14Q08AM6 782 aa5.55□□□□□ -1.52
RNU6-48P-201ENST00000384161 TAS1R3Q7RTX0 852 aa5.55□□□□□ -1.52
RNU6-48P-201ENST00000384161 PHF24Q9UPV7 400 aa5.55□□□□□ -1.52
RNU6-48P-201ENST00000384161 PIK3R2O00459 728 aa5.54□□□□□ -1.52
RNU6-48P-201ENST00000384161 CTBSQ01459 385 aa5.54□□□□□ -1.52
RNU6-48P-201ENST00000384161 LBRQ14739 615 aaKnown RBP5.54□□□□□ -1.52
RNU6-48P-201ENST00000384161 NOP53Q9NZM5 478 aaKnown RBP5.54□□□□□ -1.52
RNU6-48P-201ENST00000384161 HCN2Q9UL51 889 aa5.54□□□□□ -1.52
RNU6-48P-201ENST00000384161 PCDHB9Q9Y5E1 797 aa5.54□□□□□ -1.52
RNU6-48P-201ENST00000384161 HRH3Q9Y5N1 445 aa5.54□□□□□ -1.52
RNU6-48P-201ENST00000384161 RNF20Q5VTR2 975 aa5.53□□□□□ -1.52
RNU6-48P-201ENST00000384161 CC2D2BQ6DHV5 1058 aa5.53□□□□□ -1.52
RNU6-48P-201ENST00000384161 NLRP3Q96P20 1036 aa5.53□□□□□ -1.52
RNU6-48P-201ENST00000384161 ALG2Q9H553 416 aa5.53□□□□□ -1.52
RNU6-48P-201ENST00000384161 ZFP64Q9NPA5 681 aa5.53□□□□□ -1.52
RNU6-48P-201ENST00000384161 KLF15Q9UIH9 416 aa5.53□□□□□ -1.52
RNU6-48P-201ENST00000384161 ATXN7L1Q9ULK2 861 aaPredicted RBP5.53□□□□□ -1.52
RNU6-48P-201ENST00000384161 BNIP3LO60238 219 aa5.52□□□□□ -1.53
RNU6-48P-201ENST00000384161 ARAFP10398 606 aa5.52□□□□□ -1.53
RNU6-48P-201ENST00000384161 GATA4P43694 442 aa5.52□□□□□ -1.53
RNU6-48P-201ENST00000384161 SCTRP47872 440 aa5.52□□□□□ -1.53
RNU6-48P-201ENST00000384161 HDGFL1Q5TGJ6 251 aa5.52□□□□□ -1.53
RNU6-48P-201ENST00000384161 RNF135Q8IUD6 432 aa5.52□□□□□ -1.53
RNU6-48P-201ENST00000384161 TRIM11Q96F44 468 aa5.52□□□□□ -1.53
RNU6-48P-201ENST00000384161 CALR3Q96L12 384 aaKnown RBP5.52□□□□□ -1.53
RNU6-48P-201ENST00000384161 OSBPL3Q9H4L5 887 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms