RNA–Protein interactions for RNA: ENST00000383738.6

CSPG5-202, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CSPG5, Length 4,161 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-202ENST00000383738 TNNT3P45378 269 aaPredicted RBP22.66■■□□□ 1.22
CSPG5-202ENST00000383738 ZKSCAN1P17029 563 aaPredicted RBP22.66■■□□□ 1.22
CSPG5-202ENST00000383738 MAP3K2Q9Y2U5 619 aa22.66■■□□□ 1.22
CSPG5-202ENST00000383738 ERC2O15083 957 aa22.65■■□□□ 1.22
CSPG5-202ENST00000383738 NBPF6Q5VWK0 638 aa22.65■■□□□ 1.22
CSPG5-202ENST00000383738 DNAAF4Q8WXU2 420 aa22.65■■□□□ 1.22
CSPG5-202ENST00000383738 NBPF4Q96M43 638 aa22.65■■□□□ 1.22
CSPG5-202ENST00000383738 FKBP4Q02790 459 aaKnown RBP eCLIP22.65■■□□□ 1.22
CSPG5-202ENST00000383738 ABCC11Q96J66 1382 aa22.65■■□□□ 1.22
CSPG5-202ENST00000383738 ADGBQ8N7X0 1667 aa22.65■■□□□ 1.22
CSPG5-202ENST00000383738 RUFY2Q8WXA3 655 aa22.65■■□□□ 1.22
CSPG5-202ENST00000383738 CCDC8Q9H0W5 538 aaPredicted RBP22.65■■□□□ 1.22
CSPG5-202ENST00000383738 GDPD2Q9HCC8 539 aa22.64■■□□□ 1.22
CSPG5-202ENST00000383738 ROBO2Q9HCK4 1378 aa22.64■■□□□ 1.21
CSPG5-202ENST00000383738 VAMP4O75379 141 aa22.64■■□□□ 1.21
CSPG5-202ENST00000383738 PRR36Q9H6K5 1346 aa22.63■■□□□ 1.21
CSPG5-202ENST00000383738 A0A087WZG4 1122 aa22.63■■□□□ 1.21
CSPG5-202ENST00000383738 G2E3Q7L622 706 aa22.63■■□□□ 1.21
CSPG5-202ENST00000383738 UBE3BQ7Z3V4 1068 aa22.63■■□□□ 1.21
CSPG5-202ENST00000383738 DBF4Q9UBU7 674 aaPredicted RBP22.63■■□□□ 1.21
CSPG5-202ENST00000383738 CCDC39Q9UFE4 941 aa22.63■■□□□ 1.21
CSPG5-202ENST00000383738 TRIM35Q9UPQ4 493 aa22.63■■□□□ 1.21
CSPG5-202ENST00000383738 VPS37CA5D8V6 355 aaPredicted RBP22.63■■□□□ 1.21
CSPG5-202ENST00000383738 ALDH1L2Q3SY69 923 aa22.63■■□□□ 1.21
CSPG5-202ENST00000383738 BTG4Q9NY30 223 aa22.63■■□□□ 1.21
CSPG5-202ENST00000383738 FLT4P35916 1363 aa22.63■■□□□ 1.21
CSPG5-202ENST00000383738 PHF14O94880 888 aa22.63■■□□□ 1.21
CSPG5-202ENST00000383738 PHAXQ9H814 394 aaKnown RBP22.63■■□□□ 1.21
CSPG5-202ENST00000383738 ADCY10Q96PN6 1610 aa22.62■■□□□ 1.21
CSPG5-202ENST00000383738 CCDC57Q2TAC2 916 aa22.62■■□□□ 1.21
CSPG5-202ENST00000383738 CWC27Q6UX04 472 aaKnown RBP22.62■■□□□ 1.21
CSPG5-202ENST00000383738 ZNF830Q96NB3 372 aaPredicted RBP22.62■■□□□ 1.21
CSPG5-202ENST00000383738 ZCRB1Q8TBF4 217 aaKnown RBP22.62■■□□□ 1.21
CSPG5-202ENST00000383738 MAP7D2Q96T17 732 aa22.62■■□□□ 1.21
CSPG5-202ENST00000383738 FIBPO43427 364 aa22.61■■□□□ 1.21
CSPG5-202ENST00000383738 COPS6Q7L5N1 327 aa22.61■■□□□ 1.21
CSPG5-202ENST00000383738 EIF2AK4Q9P2K8 1649 aaKnown RBP22.61■■□□□ 1.21
CSPG5-202ENST00000383738 SAMD1Q6SPF0 538 aaPredicted RBP22.61■■□□□ 1.21
CSPG5-202ENST00000383738 SLAIN2Q9P270 581 aa22.6■■□□□ 1.21
CSPG5-202ENST00000383738 SPDYE4A6NLX3 237 aa22.6■■□□□ 1.21
CSPG5-202ENST00000383738 STARD3NLO95772 234 aa22.6■■□□□ 1.21
CSPG5-202ENST00000383738 FMNL2Q96PY5 1086 aa22.6■■□□□ 1.21
CSPG5-202ENST00000383738 BOLA2Q9H3K6 86 aa22.6■■□□□ 1.21
CSPG5-202ENST00000383738 KDM2BQ8NHM5 1336 aa22.6■■□□□ 1.21
CSPG5-202ENST00000383738 RPAP2Q8IXW5 612 aaPredicted RBP22.59■■□□□ 1.21
CSPG5-202ENST00000383738 LRRIQ1Q96JM4 1722 aa22.59■■□□□ 1.21
CSPG5-202ENST00000383738 C16orf71Q8IYS4 520 aaPredicted RBP22.59■■□□□ 1.21
CSPG5-202ENST00000383738 PUS7Q96PZ0 661 aaKnown RBP22.59■■□□□ 1.21
CSPG5-202ENST00000383738 AAMPQ13685 434 aa22.59■■□□□ 1.21
CSPG5-202ENST00000383738 XAGE3Q8WTP9 111 aa22.59■■□□□ 1.21
CSPG5-202ENST00000383738 IP6K1Q92551 441 aa22.59■■□□□ 1.21
CSPG5-202ENST00000383738 MPHOSPH8Q99549 860 aa22.58■■□□□ 1.21
CSPG5-202ENST00000383738 CNTROBQ8N137 903 aa22.58■■□□□ 1.21
CSPG5-202ENST00000383738 GOLGA6L6A8MZA4 724 aa22.58■■□□□ 1.2
CSPG5-202ENST00000383738 CWF19L2Q2TBE0 894 aaKnown RBP22.58■■□□□ 1.2
CSPG5-202ENST00000383738 FAM184AQ8NB25 1140 aa22.57■■□□□ 1.2
CSPG5-202ENST00000383738 LARP1Q6PKG0 1096 aaKnown RBP22.57■■□□□ 1.2
CSPG5-202ENST00000383738 TOM1O60784 492 aa22.56■■□□□ 1.2
CSPG5-202ENST00000383738 LARP6Q9BRS8 491 aaKnown RBP22.56■■□□□ 1.2
CSPG5-202ENST00000383738 PPP1R42Q7Z4L9 355 aa22.56■■□□□ 1.2
CSPG5-202ENST00000383738 UPF3BQ9BZI7 483 aaKnown RBP22.56■■□□□ 1.2
CSPG5-202ENST00000383738 WWC3Q9ULE0 1092 aa22.56■■□□□ 1.2
CSPG5-202ENST00000383738 TSPY26PQ9H489 355 aa22.55■■□□□ 1.2
CSPG5-202ENST00000383738 CEP126Q9P2H0 1117 aa22.55■■□□□ 1.2
CSPG5-202ENST00000383738 PLEKHG3A1L390 1219 aa22.55■■□□□ 1.2
CSPG5-202ENST00000383738 H3BQV1 296 aa22.55■■□□□ 1.2
CSPG5-202ENST00000383738 IFFO2Q5TF58 517 aa22.55■■□□□ 1.2
CSPG5-202ENST00000383738 LMTK3Q96Q04 1460 aa22.55■■□□□ 1.2
CSPG5-202ENST00000383738 BAG4O95429 457 aaKnown RBP22.54■■□□□ 1.2
CSPG5-202ENST00000383738 CDC42BPBQ9Y5S2 1711 aa22.54■■□□□ 1.2
CSPG5-202ENST00000383738 ERVK-7P63135 1459 aa22.54■■□□□ 1.2
CSPG5-202ENST00000383738 KCNQ3O43525 872 aa22.54■■□□□ 1.2
CSPG5-202ENST00000383738 MRPL50Q8N5N7 158 aaKnown RBP22.54■■□□□ 1.2
CSPG5-202ENST00000383738 PIK3C2GO75747 1445 aa22.54■■□□□ 1.2
CSPG5-202ENST00000383738 TRMT112Q9UI30 125 aaKnown RBP22.54■■□□□ 1.2
CSPG5-202ENST00000383738 RRP12Q5JTH9 1297 aaKnown RBP22.53■■□□□ 1.2
CSPG5-202ENST00000383738 SNRKQ9NRH2 765 aa22.53■■□□□ 1.2
CSPG5-202ENST00000383738 TBC1D2BQ9UPU7 963 aa22.53■■□□□ 1.2
CSPG5-202ENST00000383738 PA2G4Q9UQ80 394 aaKnown RBP22.52■■□□□ 1.2
CSPG5-202ENST00000383738 STK3Q13188 491 aa22.52■■□□□ 1.2
CSPG5-202ENST00000383738 ANKRD13DQ6ZTN6 518 aa22.52■■□□□ 1.2
CSPG5-202ENST00000383738 TSC1Q92574 1164 aa22.52■■□□□ 1.2
CSPG5-202ENST00000383738 TMEM94Q12767 1356 aa22.52■■□□□ 1.19
CSPG5-202ENST00000383738 RABEP1Q15276 862 aa22.51■■□□□ 1.19
CSPG5-202ENST00000383738 AKAP4Q5JQC9 854 aa22.51■■□□□ 1.19
CSPG5-202ENST00000383738 CCAR2Q8N163 923 aaKnown RBP22.51■■□□□ 1.19
CSPG5-202ENST00000383738 TRERF1Q96PN7 1200 aa22.51■■□□□ 1.19
CSPG5-202ENST00000383738 DNAJC5Q9H3Z4 198 aa22.51■■□□□ 1.19
CSPG5-202ENST00000383738 USP25Q9UHP3 1055 aa22.51■■□□□ 1.19
CSPG5-202ENST00000383738 ZNF219Q9P2Y4 722 aaPredicted RBP22.51■■□□□ 1.19
CSPG5-202ENST00000383738 CLASP1Q7Z460 1538 aa22.51■■□□□ 1.19
CSPG5-202ENST00000383738 HECW2Q9P2P5 1572 aa22.5■■□□□ 1.19
CSPG5-202ENST00000383738 SNRPA1P09661 255 aaKnown RBP22.5■■□□□ 1.19
CSPG5-202ENST00000383738 ZNF335Q9H4Z2 1342 aaPredicted RBP22.5■■□□□ 1.19
CSPG5-202ENST00000383738 NRDCO43847 1150 aa22.5■■□□□ 1.19
CSPG5-202ENST00000383738 GAS2L3Q86XJ1 694 aa22.5■■□□□ 1.19
CSPG5-202ENST00000383738 EDC4Q6P2E9 1401 aaKnown RBP22.5■■□□□ 1.19
CSPG5-202ENST00000383738 TTC39AQ5SRH9 613 aa22.5■■□□□ 1.19
CSPG5-202ENST00000383738 ABCF2Q9UG63 623 aa22.5■■□□□ 1.19
CSPG5-202ENST00000383738 CIZ1Q9ULV3 898 aaPredicted RBP22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms