RNA–Protein interactions for RNA: ENST00000381989.3

PARP4-201, Transcript of poly(ADP-ribose) polymerase family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PARP4, Length 5,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARP4-201ENST00000381989 IQCEQ6IPM2 695 aa9.98□□□□□ -0.81
PARP4-201ENST00000381989 RAB11FIP3O75154 756 aa9.98□□□□□ -0.81
PARP4-201ENST00000381989 FCHSD2O94868 740 aa9.98□□□□□ -0.81
PARP4-201ENST00000381989 CRBNQ96SW2 442 aa9.98□□□□□ -0.81
PARP4-201ENST00000381989 B4DLN1 442 aa9.97□□□□□ -0.81
PARP4-201ENST00000381989 MRPL12P52815 198 aaKnown RBP9.97□□□□□ -0.81
PARP4-201ENST00000381989 TTC39AQ5SRH9 613 aa9.97□□□□□ -0.81
PARP4-201ENST00000381989 RUFY1Q96T51 708 aa9.97□□□□□ -0.81
PARP4-201ENST00000381989 CBFA2T2O43439 604 aa9.97□□□□□ -0.81
PARP4-201ENST00000381989 IGHMBP2P38935 993 aaKnown RBP9.97□□□□□ -0.81
PARP4-201ENST00000381989 WASHC4Q2M389 1173 aa9.97□□□□□ -0.81
PARP4-201ENST00000381989 OFD1O75665 1012 aa9.96□□□□□ -0.81
PARP4-201ENST00000381989 C8orf34Q49A92 452 aa9.96□□□□□ -0.81
PARP4-201ENST00000381989 ESCO1Q5FWF5 840 aa9.96□□□□□ -0.81
PARP4-201ENST00000381989 PPP4R3AQ6IN85 833 aa9.96□□□□□ -0.81
PARP4-201ENST00000381989 PDE4AP27815 886 aa9.96□□□□□ -0.81
PARP4-201ENST00000381989 CETN2P41208 172 aa9.96□□□□□ -0.81
PARP4-201ENST00000381989 RIMBP3CA6NJZ7 1639 aa9.96□□□□□ -0.82
PARP4-201ENST00000381989 RIMBP3BA6NNM3 1639 aa9.96□□□□□ -0.82
PARP4-201ENST00000381989 RIMBP3Q9UFD9 1639 aa9.96□□□□□ -0.82
PARP4-201ENST00000381989 EIF2S2P20042 333 aaKnown RBP9.96□□□□□ -0.82
PARP4-201ENST00000381989 SLFN5Q08AF3 891 aa9.96□□□□□ -0.82
PARP4-201ENST00000381989 SYTL4Q96C24 671 aaPredicted RBP9.96□□□□□ -0.82
PARP4-201ENST00000381989 LRRC27Q9C0I9 530 aa9.96□□□□□ -0.82
PARP4-201ENST00000381989 ARHGAP31Q2M1Z3 1444 aa9.96□□□□□ -0.82
PARP4-201ENST00000381989 FGFR1OPO95684 399 aaKnown RBP9.96□□□□□ -0.82
PARP4-201ENST00000381989 ZNHIT6Q9NWK9 470 aaKnown RBP9.96□□□□□ -0.82
PARP4-201ENST00000381989 NRXN3Q9Y4C0 1643 aa9.95□□□□□ -0.82
PARP4-201ENST00000381989 IL16Q14005 1332 aa9.95□□□□□ -0.82
PARP4-201ENST00000381989 CCDC196A0A1B0GTZ2 297 aa9.95□□□□□ -0.82
PARP4-201ENST00000381989 PES1O00541 588 aaKnown RBP9.95□□□□□ -0.82
PARP4-201ENST00000381989 LDHCP07864 332 aa9.95□□□□□ -0.82
PARP4-201ENST00000381989 FBXW7Q969H0 707 aa9.95□□□□□ -0.82
PARP4-201ENST00000381989 CDCA7Q9BWT1 371 aaPredicted RBP9.95□□□□□ -0.82
PARP4-201ENST00000381989 CCDC27Q2M243 656 aa9.95□□□□□ -0.82
PARP4-201ENST00000381989 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.95□□□□□ -0.823e-6■■■■■ 136.6
PARP4-201ENST00000381989 PPP1R12BO60237 982 aaPredicted RBP9.95□□□□□ -0.82
PARP4-201ENST00000381989 RPAP2Q8IXW5 612 aaPredicted RBP9.95□□□□□ -0.82
PARP4-201ENST00000381989 APAF1O14727 1248 aa9.94□□□□□ -0.82
PARP4-201ENST00000381989 NOM1Q5C9Z4 860 aaKnown RBP9.94□□□□□ -0.82
PARP4-201ENST00000381989 SPTY2D1Q68D10 685 aaPredicted RBP9.94□□□□□ -0.82
PARP4-201ENST00000381989 MCTP1Q6DN14 999 aa9.94□□□□□ -0.82
PARP4-201ENST00000381989 SMARCC1Q92922 1105 aaPredicted RBP9.94□□□□□ -0.82
PARP4-201ENST00000381989 FAM13BQ9NYF5 915 aa9.94□□□□□ -0.82
PARP4-201ENST00000381989 BICD2Q8TD16 824 aa9.94□□□□□ -0.82
PARP4-201ENST00000381989 BCL11BQ9C0K0 894 aaPredicted RBP9.94□□□□□ -0.82
PARP4-201ENST00000381989 CNNM1Q9NRU3 951 aa9.94□□□□□ -0.82
PARP4-201ENST00000381989 PREX1Q8TCU6 1659 aa9.94□□□□□ -0.82
PARP4-201ENST00000381989 HOOK3Q86VS8 718 aa9.94□□□□□ -0.82
PARP4-201ENST00000381989 DDX12PQ92771 950 aa9.94□□□□□ -0.82
PARP4-201ENST00000381989 RAB34Q9BZG1 259 aa9.94□□□□□ -0.82
PARP4-201ENST00000381989 TTC21AQ8NDW8 1320 aa9.94□□□□□ -0.82
PARP4-201ENST00000381989 MED14O60244 1454 aa9.94□□□□□ -0.82
PARP4-201ENST00000381989 PTPRMP28827 1452 aa9.94□□□□□ -0.82
PARP4-201ENST00000381989 KIF4AO95239 1232 aa9.94□□□□□ -0.82
PARP4-201ENST00000381989 TOM1L2Q6ZVM7 507 aa9.93□□□□□ -0.82
PARP4-201ENST00000381989 CCDC12Q8WUD4 166 aaPredicted RBP9.93□□□□□ -0.82
PARP4-201ENST00000381989 FEZ1Q99689 392 aa9.93□□□□□ -0.82
PARP4-201ENST00000381989 TNNQ9UQP3 1299 aa9.93□□□□□ -0.82
PARP4-201ENST00000381989 RRP12Q5JTH9 1297 aaKnown RBP9.93□□□□□ -0.82
PARP4-201ENST00000381989 CADPS2Q86UW7 1296 aa9.93□□□□□ -0.82
PARP4-201ENST00000381989 MPHOSPH8Q99549 860 aa9.93□□□□□ -0.82
PARP4-201ENST00000381989 FSD1Q9BTV5 496 aa9.93□□□□□ -0.82
PARP4-201ENST00000381989 RNF41Q9H4P4 317 aaPredicted RBP9.93□□□□□ -0.82
PARP4-201ENST00000381989 TAOK2Q9UL54 1235 aa9.93□□□□□ -0.82
PARP4-201ENST00000381989 DDX49Q9Y6V7 483 aaKnown RBP9.93□□□□□ -0.82
PARP4-201ENST00000381989 GSTO1P78417 241 aa9.93□□□□□ -0.82
PARP4-201ENST00000381989 MAP7D2Q96T17 732 aa9.93□□□□□ -0.82
PARP4-201ENST00000381989 HMGB1P1B2RPK0 211 aaPredicted RBP9.92□□□□□ -0.82
PARP4-201ENST00000381989 PRDM11Q9NQV5 511 aa9.92□□□□□ -0.82
PARP4-201ENST00000381989 IKQ13123 557 aaPredicted RBP9.92□□□□□ -0.82
PARP4-201ENST00000381989 CERS3Q8IU89 383 aa9.92□□□□□ -0.82
PARP4-201ENST00000381989 CLUAP1Q96AJ1 413 aa9.92□□□□□ -0.82
PARP4-201ENST00000381989 TNNT3P45378 269 aaPredicted RBP9.92□□□□□ -0.82
PARP4-201ENST00000381989 TMEM132AQ24JP5 1023 aa9.92□□□□□ -0.82
PARP4-201ENST00000381989 ALDH1L2Q3SY69 923 aa9.92□□□□□ -0.82
PARP4-201ENST00000381989 STXBP4Q6ZWJ1 553 aa9.92□□□□□ -0.82
PARP4-201ENST00000381989 ZGPATQ8N5A5 531 aaKnown RBP9.92□□□□□ -0.82
PARP4-201ENST00000381989 CCDC61Q9Y6R9 512 aa9.92□□□□□ -0.82
PARP4-201ENST00000381989 LARP1Q6PKG0 1096 aaKnown RBP9.92□□□□□ -0.82
PARP4-201ENST00000381989 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.92□□□□□ -0.82
PARP4-201ENST00000381989 ZMYM3Q14202 1370 aa9.91□□□□□ -0.82
PARP4-201ENST00000381989 TTF1Q15361 905 aaPredicted RBP9.91□□□□□ -0.82
PARP4-201ENST00000381989 DEF6Q9H4E7 631 aa9.91□□□□□ -0.82
PARP4-201ENST00000381989 IGHDP01880 384 aa9.91□□□□□ -0.82
PARP4-201ENST00000381989 CCDC39Q9UFE4 941 aa9.91□□□□□ -0.82
PARP4-201ENST00000381989 CIZ1Q9ULV3 898 aaPredicted RBP9.91□□□□□ -0.82
PARP4-201ENST00000381989 ZNF710Q8N1W2 664 aa9.91□□□□□ -0.82
PARP4-201ENST00000381989 LRRC45Q96CN5 670 aa9.91□□□□□ -0.82
PARP4-201ENST00000381989 PPIP5K1Q6PFW1 1433 aa9.91□□□□□ -0.82
PARP4-201ENST00000381989 CCDC69A6NI79 296 aa9.91□□□□□ -0.82
PARP4-201ENST00000381989 MPHOSPH10O00566 681 aaKnown RBP9.91□□□□□ -0.82
PARP4-201ENST00000381989 IFIT1P09914 478 aaKnown RBP9.91□□□□□ -0.82
PARP4-201ENST00000381989 CAVIN4Q5BKX8 364 aa9.91□□□□□ -0.82
PARP4-201ENST00000381989 HSP90B2PQ58FF3 399 aa9.9□□□□□ -0.82
PARP4-201ENST00000381989 NEUROD6Q96NK8 337 aa9.9□□□□□ -0.82
PARP4-201ENST00000381989 CEP126Q9P2H0 1117 aa9.9□□□□□ -0.82
PARP4-201ENST00000381989 KINO60870 393 aaKnown RBP9.9□□□□□ -0.82
PARP4-201ENST00000381989 BCAR3O75815 825 aa9.9□□□□□ -0.82
PARP4-201ENST00000381989 ZNF530Q6P9A1 599 aaPredicted RBP9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms