RNA–Protein interactions for RNA: ENST00000380805.6

GMDS-201, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 2

Gene GMDS, Length 1,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-201ENST00000380805 NPM2Q86SE8 214 aaKnown RBP24.24■■□□□ 1.47
GMDS-201ENST00000380805 ZBTB7CA1YPR0 619 aa24.23■■□□□ 1.47
GMDS-201ENST00000380805 CCDC30Q5VVM6 783 aa24.23■■□□□ 1.47
GMDS-201ENST00000380805 SIRT2Q8IXJ6 389 aa24.23■■□□□ 1.47
GMDS-201ENST00000380805 CPDO75976 1380 aa24.23■■□□□ 1.47
GMDS-201ENST00000380805 PXDNLA1KZ92 1463 aa24.23■■□□□ 1.47
GMDS-201ENST00000380805 HOXB7P09629 217 aa24.21■■□□□ 1.47
GMDS-201ENST00000380805 DDRGK1Q96HY6 314 aa24.21■■□□□ 1.47
GMDS-201ENST00000380805 ZNF530Q6P9A1 599 aaPredicted RBP24.21■■□□□ 1.47
GMDS-201ENST00000380805 STK31Q9BXU1 1019 aa24.21■■□□□ 1.47
GMDS-201ENST00000380805 PLEKHG5O94827 1062 aa24.2■■□□□ 1.46
GMDS-201ENST00000380805 ERICH6Q7L0X2 663 aa24.2■■□□□ 1.46
GMDS-201ENST00000380805 ZBTB47Q9UFB7 747 aaPredicted RBP24.2■■□□□ 1.46
GMDS-201ENST00000380805 C1orf115Q9H7X2 142 aa24.19■■□□□ 1.46
GMDS-201ENST00000380805 SCN11AQ9UI33 1791 aa24.19■■□□□ 1.46
GMDS-201ENST00000380805 PKD1L3Q7Z443 1732 aa24.19■■□□□ 1.46
GMDS-201ENST00000380805 G2E3Q7L622 706 aa24.18■■□□□ 1.46
GMDS-201ENST00000380805 CHD1LQ86WJ1 897 aa24.18■■□□□ 1.46
GMDS-201ENST00000380805 CCT4P50991 539 aaKnown RBP24.18■■□□□ 1.46
GMDS-201ENST00000380805 LGR6Q9HBX8 967 aa24.18■■□□□ 1.46
GMDS-201ENST00000380805 ABCA3Q99758 1704 aa24.16■■□□□ 1.46
GMDS-201ENST00000380805 EIF4A1P60842 406 aaKnown RBP24.16■■□□□ 1.46
GMDS-201ENST00000380805 ZC3H6P61129 1189 aaKnown RBP24.16■■□□□ 1.46
GMDS-201ENST00000380805 RPAP2Q8IXW5 612 aaPredicted RBP24.16■■□□□ 1.46
GMDS-201ENST00000380805 ANKRD44Q8N8A2 993 aa24.16■■□□□ 1.46
GMDS-201ENST00000380805 CHMP4AQ9BY43 222 aa24.16■■□□□ 1.46
GMDS-201ENST00000380805 RNMTO43148 476 aaKnown RBP24.15■■□□□ 1.46
GMDS-201ENST00000380805 CABLES1Q8TDN4 633 aa24.15■■□□□ 1.46
GMDS-201ENST00000380805 FLIIQ13045 1269 aa24.15■■□□□ 1.46
GMDS-201ENST00000380805 C1orf141Q5JVX7 400 aa24.15■■□□□ 1.46
GMDS-201ENST00000380805 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.14■■□□□ 1.451e-14■□□□□ 9.6
GMDS-201ENST00000380805 HEG1Q9ULI3 1381 aa24.14■■□□□ 1.45
GMDS-201ENST00000380805 TEFQ10587 303 aa24.13■■□□□ 1.45
GMDS-201ENST00000380805 DCTPP1Q9H773 170 aa24.13■■□□□ 1.45
GMDS-201ENST00000380805 CEP85Q6P2H3 762 aa24.12■■□□□ 1.45
GMDS-201ENST00000380805 PARP4Q9UKK3 1724 aaKnown RBP24.11■■□□□ 1.45
GMDS-201ENST00000380805 MEGF6O75095 1541 aa24.11■■□□□ 1.45
GMDS-201ENST00000380805 MPRIPQ6WCQ1 1025 aa24.11■■□□□ 1.45
GMDS-201ENST00000380805 MEIS3Q99687 375 aa24.11■■□□□ 1.45
GMDS-201ENST00000380805 MRC1P22897 1456 aa24.11■■□□□ 1.45
GMDS-201ENST00000380805 JCADQ9P266 1359 aa24.1■■□□□ 1.45
GMDS-201ENST00000380805 SEC24BO95487 1268 aa24.1■■□□□ 1.45
GMDS-201ENST00000380805 HDGFL1Q5TGJ6 251 aa24.1■■□□□ 1.45
GMDS-201ENST00000380805 LNPKQ9C0E8 428 aa24.1■■□□□ 1.45
GMDS-201ENST00000380805 BTBD11A6QL63 1104 aa24.09■■□□□ 1.45
GMDS-201ENST00000380805 ILDR1Q86SU0 546 aaPredicted RBP24.09■■□□□ 1.45
GMDS-201ENST00000380805 F6X3S4 739 aa24.08■■□□□ 1.45
GMDS-201ENST00000380805 RAPGEF4Q8WZA2 1011 aa24.08■■□□□ 1.45
GMDS-201ENST00000380805 FKBP5Q13451 457 aaPredicted RBP24.07■■□□□ 1.44
GMDS-201ENST00000380805 ANKRD45Q5TZF3 282 aa24.07■■□□□ 1.44
GMDS-201ENST00000380805 COL22A1Q8NFW1 1626 aaPredicted RBP24.07■■□□□ 1.44
GMDS-201ENST00000380805 BMP2KLQ5H9B9 411 aa24.07■■□□□ 1.44
GMDS-201ENST00000380805 KDM6AO15550 1401 aaPredicted RBP24.07■■□□□ 1.44
GMDS-201ENST00000380805 NLRP2Q9NX02 1062 aa24.06■■□□□ 1.44
GMDS-201ENST00000380805 TATP17735 454 aaPredicted RBP24.05■■□□□ 1.44
GMDS-201ENST00000380805 NUTM2BA6NNL0 878 aaPredicted RBP24.04■■□□□ 1.44
GMDS-201ENST00000380805 NUTM2EB1AL46 878 aaPredicted RBP24.04■■□□□ 1.44
GMDS-201ENST00000380805 KCNQ3O43525 872 aa24.04■■□□□ 1.44
GMDS-201ENST00000380805 SLC4A10Q6U841 1118 aa24.04■■□□□ 1.44
GMDS-201ENST00000380805 NUTM2AQ8IVF1 878 aaPredicted RBP24.04■■□□□ 1.44
GMDS-201ENST00000380805 TBC1D32Q96NH3 1257 aa24.04■■□□□ 1.44
GMDS-201ENST00000380805 SPG7Q9UQ90 795 aa24.04■■□□□ 1.44
GMDS-201ENST00000380805 GNAI3P08754 354 aa24.03■■□□□ 1.44
GMDS-201ENST00000380805 PHKG2P15735 406 aa24.03■■□□□ 1.44
GMDS-201ENST00000380805 UPF2Q9HAU5 1272 aaKnown RBP24.03■■□□□ 1.44
GMDS-201ENST00000380805 HMMRO75330 724 aa24.01■■□□□ 1.43
GMDS-201ENST00000380805 GNAI2P04899 355 aa24.01■■□□□ 1.43
GMDS-201ENST00000380805 NECTIN2Q92692 538 aa24.01■■□□□ 1.43
GMDS-201ENST00000380805 GIGYF1O75420 1035 aaPredicted RBP24.01■■□□□ 1.43
GMDS-201ENST00000380805 CHRNA2Q15822 529 aa24.01■■□□□ 1.43
GMDS-201ENST00000380805 C5P01031 1676 aa24■■□□□ 1.43
GMDS-201ENST00000380805 COL5A2P05997 1499 aaPredicted RBP24■■□□□ 1.43
GMDS-201ENST00000380805 IFNL2Q8IZJ0 200 aa23.99■■□□□ 1.43
GMDS-201ENST00000380805 PHAXQ9H814 394 aaKnown RBP23.99■■□□□ 1.43
GMDS-201ENST00000380805 CHPF2Q9P2E5 772 aa23.99■■□□□ 1.43
GMDS-201ENST00000380805 CSB-PGBD3P0DP91 1061 aa23.98■■□□□ 1.43
GMDS-201ENST00000380805 SLC52A2Q9HAB3 445 aa23.98■■□□□ 1.43
GMDS-201ENST00000380805 DBF4Q9UBU7 674 aaPredicted RBP23.98■■□□□ 1.43
GMDS-201ENST00000380805 SPATA31A6Q5VVP1 1343 aa23.98■■□□□ 1.43
GMDS-201ENST00000380805 WDR17Q8IZU2 1322 aa23.98■■□□□ 1.43
GMDS-201ENST00000380805 ADAMTS2O95450 1211 aa23.98■■□□□ 1.43
GMDS-201ENST00000380805 LRP6O75581 1613 aa23.97■■□□□ 1.43
GMDS-201ENST00000380805 EIF2S2P20042 333 aaKnown RBP23.96■■□□□ 1.43
GMDS-201ENST00000380805 PLEKHM2Q8IWE5 1019 aa23.96■■□□□ 1.43
GMDS-201ENST00000380805 DCAF5Q96JK2 942 aa23.96■■□□□ 1.43
GMDS-201ENST00000380805 USP44Q9H0E7 712 aa23.96■■□□□ 1.43
GMDS-201ENST00000380805 SHANK3Q9BYB0 1731 aa23.95■■□□□ 1.42
GMDS-201ENST00000380805 MYT1Q01538 1121 aa23.95■■□□□ 1.42
GMDS-201ENST00000380805 ADCY9O60503 1353 aa23.95■■□□□ 1.42
GMDS-201ENST00000380805 GLI3P10071 1580 aa23.95■■□□□ 1.42
GMDS-201ENST00000380805 HSP90AB1P08238 724 aaKnown RBP23.94■■□□□ 1.42
GMDS-201ENST00000380805 IBTKQ9P2D0 1353 aaPredicted RBP23.94■■□□□ 1.42
GMDS-201ENST00000380805 LAMB4A4D0S4 1761 aa23.93■■□□□ 1.42
GMDS-201ENST00000380805 CYP27B1O15528 508 aa23.93■■□□□ 1.42
GMDS-201ENST00000380805 ATP8B2P98198 1209 aa23.93■■□□□ 1.42
GMDS-201ENST00000380805 ZNF790Q6PG37 636 aa23.93■■□□□ 1.42
GMDS-201ENST00000380805 DNAAF4Q8WXU2 420 aa23.93■■□□□ 1.42
GMDS-201ENST00000380805 SRCIN1Q9C0H9 1055 aa23.93■■□□□ 1.42
GMDS-201ENST00000380805 PRDM11Q9NQV5 511 aa23.93■■□□□ 1.42
GMDS-201ENST00000380805 TUBGCP6Q96RT7 1819 aa23.93■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms